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The map label for this gene is ccmC [H]

Identifier: 94311323

GI number: 94311323

Start: 2598922

End: 2599659

Strand: Direct

Name: ccmC [H]

Synonym: Rmet_2387

Alternate gene names: 94311323

Gene position: 2598922-2599659 (Clockwise)

Preceding gene: 94311322

Following gene: 94311324

Centisome position: 66.16

GC content: 62.33

Gene sequence:

>738_bases
ATGGTCAACTGGTTCAAGTTTTCATCTCCCAAGGCGTTCTACCCACTCGCGGGGAAGCTCGTCCCTTGGCTCGGCGTGAC
CGCCGCGGCGCTGTCGCTCGCGGGCGTCTATGTGGGGTTCTTCTTGGCACCCACCGACGCCCAGCAGGGAGAGGGGTATC
GCATCATCTTCCTGCACGTGCCGGTTTCATGGATGTCCATGGTCATCTATCTGGCGATGGCGTTCTGGGCCGGCATTGGC
CTGGTGTTCAACAGCCGCCTGTCGGCAATGATGGCCTCGGCGCTGGCCCCCACGGGTGCACTGTTCACCTTCCTTTCTCT
GTGGACCGGCGCCTTGTGGGGAAAGCCGATGTGGGGAACCTGGTGGGTCTGGGATGCGCGGCTGACCTCTGAACTAGTCC
TGCTGTTTCTGTACATCGGTTTCATCGCACTCCAGTCGGCGATCGAAGATCGTCGCCGTGCCGACCGGGCAGGCGCCGTG
CTGGCACTGGTCGGCGTGGTGAACATCCCTGTGATCTATTTCTCCGTGCAGTGGTGGAACACCTTGCACCAGGGCGCCTC
GGTATCGCTGACTCGTTCGCCCTCCATGGCGACGGTCATGTTGTTGGGCATGCTGATCATGGTTCTTGCGGCCTGGGCTT
ACACGGCTGCGGCGGCGCTGGCGCGTGTGCGCTGCATCATCCTGGAACGCGAACATCACGCCGGCTGGCTGCAGGACATC
GAGGAGGTGAAGCGATGA

Upstream 100 bases:

>100_bases
CTCTTTGCTCGCCGCCGTGTTCGTCTTGGCGGCGTTCTTCACGCCATTCGCAGCGAGTGCATCGCTGCGCATCGCACTGG
AGTACTGAGGAGCGAAGCGT

Downstream 100 bases:

>100_bases
ACTGGGCCAGTGTGGGTGAGTTCCTGGCGATGGGCGGATATGGCGTGTACGTTTGGGGATCCGTCCTGACGACGGTGGTG
TTGCTCTGGACTGAATGCCG

Product: heme exporter membrane protein C

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MVNWFKFSSPKAFYPLAGKLVPWLGVTAAALSLAGVYVGFFLAPTDAQQGEGYRIIFLHVPVSWMSMVIYLAMAFWAGIG
LVFNSRLSAMMASALAPTGALFTFLSLWTGALWGKPMWGTWWVWDARLTSELVLLFLYIGFIALQSAIEDRRRADRAGAV
LALVGVVNIPVIYFSVQWWNTLHQGASVSLTRSPSMATVMLLGMLIMVLAAWAYTAAAALARVRCIILEREHHAGWLQDI
EEVKR

Sequences:

>Translated_245_residues
MVNWFKFSSPKAFYPLAGKLVPWLGVTAAALSLAGVYVGFFLAPTDAQQGEGYRIIFLHVPVSWMSMVIYLAMAFWAGIG
LVFNSRLSAMMASALAPTGALFTFLSLWTGALWGKPMWGTWWVWDARLTSELVLLFLYIGFIALQSAIEDRRRADRAGAV
LALVGVVNIPVIYFSVQWWNTLHQGASVSLTRSPSMATVMLLGMLIMVLAAWAYTAAAALARVRCIILEREHHAGWLQDI
EEVKR
>Mature_245_residues
MVNWFKFSSPKAFYPLAGKLVPWLGVTAAALSLAGVYVGFFLAPTDAQQGEGYRIIFLHVPVSWMSMVIYLAMAFWAGIG
LVFNSRLSAMMASALAPTGALFTFLSLWTGALWGKPMWGTWWVWDARLTSELVLLFLYIGFIALQSAIEDRRRADRAGAV
LALVGVVNIPVIYFSVQWWNTLHQGASVSLTRSPSMATVMLLGMLIMVLAAWAYTAAAALARVRCIILEREHHAGWLQDI
EEVKR

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=239, Percent_Identity=46.8619246861925, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27162; Mature: 27162

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNWFKFSSPKAFYPLAGKLVPWLGVTAAALSLAGVYVGFFLAPTDAQQGEGYRIIFLHV
CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
PVSWMSMVIYLAMAFWAGIGLVFNSRLSAMMASALAPTGALFTFLSLWTGALWGKPMWGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCE
WWVWDARLTSELVLLFLYIGFIALQSAIEDRRRADRAGAVLALVGVVNIPVIYFSVQWWN
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH
TLHQGASVSLTRSPSMATVMLLGMLIMVLAAWAYTAAAALARVRCIILEREHHAGWLQDI
HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHH
EEVKR
HHHCC
>Mature Secondary Structure
MVNWFKFSSPKAFYPLAGKLVPWLGVTAAALSLAGVYVGFFLAPTDAQQGEGYRIIFLHV
CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC
PVSWMSMVIYLAMAFWAGIGLVFNSRLSAMMASALAPTGALFTFLSLWTGALWGKPMWGT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCE
WWVWDARLTSELVLLFLYIGFIALQSAIEDRRRADRAGAVLALVGVVNIPVIYFSVQWWN
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHH
TLHQGASVSLTRSPSMATVMLLGMLIMVLAAWAYTAAAALARVRCIILEREHHAGWLQDI
HHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHH
EEVKR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]