| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94311230
Identifier: 94311230
GI number: 94311230
Start: 2512230
End: 2513909
Strand: Direct
Name: 94311230
Synonym: Rmet_2292
Alternate gene names: NA
Gene position: 2512230-2513909 (Clockwise)
Preceding gene: 94311229
Following gene: 94311231
Centisome position: 63.96
GC content: 69.88
Gene sequence:
>1680_bases ATGGCTGACATGACCTCGCAGGACATGGCAGGCAAGCTGCTCGCGGCCGGCTTCGAGCGCAGCGGCCCAGCGGCTACGGC CTTGAGCGACCCGATCGCGGACACGCCCATGGTCGTGACGCTGGACCAGTTGCGGCCCTACGACCATGACCCGCGCATGA AGCGCAACCCGGCTTACGAGGAAATCAAGGCATCCATCCGCGAGCGCGGCCTGGACGCGGCGCCGGCCATCACGCGCAGG CCCGGCGAGGACCACTACATCATCCGCAACGGCGGCAACACGCGACTGGCGATCCTGCGCGAACTCTGGTCGGAGACCAA GGAAGAACGCTTCTTCCGCATATCGTGCCTGTTCCGACCATGGCCGGAGCGCGGTGAAATCGTCGCGCTGACCGGGCATC TTGCCGAGAACGAACTGCGCGGCGGCCTCACGTTCATCGAGCGCGCGCTCGGCGTCGAGAAAGCACGGGAGTTCTACGAG CAGGAGAGCGGCGCCGCCCTGAGCCAGTCGGAACTGGCCCGCCGCCTGGCGGCCGATGGCTTCCCCGTCCAGCGGTCGCA CATCACCCGCATGGCCGACGCGGTGCGCTACCTGCTGCCCGCCATTCCCACTGTGCTCTATGGCGGCCTGGGGCGCCACC AGGTCGAGCGGCTGTCGGTCATGCGCACGGCCTGCAAACGCACCTGGGAGCACTACGCCAAGGACCGTTCGCTGCCGCTG GACTTCGACAGTTTCTTTCAGGAGGTGCTGGCGCAGTTCGACACGCAGGGCGACGAGTTCGCGCCGCAGCGCGTGCAAGA CGAGCTGATCGGCCAGATGTCCGAGCTGCTGGGCATCGGCTACGACGTGCTGGCGCTGGACCTGACCGAATCGGAAAGCC GCCACCGGGCGCTGGTCAGTGACCCGACGCCACCTGCGGCGCAGCCGGCGTTGCCTTCGCCCACCGCCGGCACGCCGACT CCGCCGGGCGCAGCATCGTCCATCGCCACGCCTGCAGCGGCGGCCGGTCCTCCACCCGCCAGCCCTCCGGCGTCCGAGCC CACCTTGCGCCACGACGACACGGCGGTTGGCGAAGCGGCCACGGGAAGCCAGCCGGCCGCACCGGGCGATCTGCTTCGCG AGCACATCGTCTCGCCAGCACCGACGACAGAACGGCTCCAATCGATCCAGCGCATGGTCGCCGACCAGTTGGGCGATGCG CTGCCGCCCGACTTCTCGGCGAGCGTGCTGCAGTCCATCCCGGTGCAAGCCGGCGGACTCTATCCGATCTCCGACGTCTG GTACATCGACGCCGGCCTGGACACGCCCGATCGGCTGCGCATCCACATCGCGCAGTTCGCGCGCGAGATCGCCGGGGAGG CAGGCCTGGACGAGTGCATCGAGGATCGCGCCGATGGCATCGGGTTTGCGTGCCGCGCCCGCGGCCAAGCCCCGTCGCCG CTCGGCCGCGCGGTGCTGACGCTGCTCACTTCCCTGACGGGTCAGCCCGTCGCCGAAGCGGGCCTGGACGGCGCGCAGCT CGCCGCCGACCTGCCGACCCTGTTGCACGGCCAGAGCCAAGGCCATGGCAGCGGCGCAAGGCGCTTGAGCGACACGGCGT TGGTCAAGCTCTTTCGGCTGCTGCGCCTCGCCCGGCGTCTGCTGGACCTGGAAGCCGGCACCACGGCGCCCGGGACGTGA
Upstream 100 bases:
>100_bases CACCGGGCCGAATTGAACGCCCGTGCGCAGATCCGCCGCGCCGAGCGAGAGGCCCGCATGGCGCCGGCCGGCGGTCGTGG GGACTGCGAGGGGTGCGGCC
Downstream 100 bases:
>100_bases GCGAGGGAGGCCGCATGTCCACATCGCATCCGCTCAACCAGGCCGTGATTGCCCAGGCGCTGTATGACCTTCGCAACGGC CAACTGCGCCGCTGCAAGGC
Product: putative regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 559; Mature: 558
Protein sequence:
>559_residues MADMTSQDMAGKLLAAGFERSGPAATALSDPIADTPMVVTLDQLRPYDHDPRMKRNPAYEEIKASIRERGLDAAPAITRR PGEDHYIIRNGGNTRLAILRELWSETKEERFFRISCLFRPWPERGEIVALTGHLAENELRGGLTFIERALGVEKAREFYE QESGAALSQSELARRLAADGFPVQRSHITRMADAVRYLLPAIPTVLYGGLGRHQVERLSVMRTACKRTWEHYAKDRSLPL DFDSFFQEVLAQFDTQGDEFAPQRVQDELIGQMSELLGIGYDVLALDLTESESRHRALVSDPTPPAAQPALPSPTAGTPT PPGAASSIATPAAAAGPPPASPPASEPTLRHDDTAVGEAATGSQPAAPGDLLREHIVSPAPTTERLQSIQRMVADQLGDA LPPDFSASVLQSIPVQAGGLYPISDVWYIDAGLDTPDRLRIHIAQFAREIAGEAGLDECIEDRADGIGFACRARGQAPSP LGRAVLTLLTSLTGQPVAEAGLDGAQLAADLPTLLHGQSQGHGSGARRLSDTALVKLFRLLRLARRLLDLEAGTTAPGT
Sequences:
>Translated_559_residues MADMTSQDMAGKLLAAGFERSGPAATALSDPIADTPMVVTLDQLRPYDHDPRMKRNPAYEEIKASIRERGLDAAPAITRR PGEDHYIIRNGGNTRLAILRELWSETKEERFFRISCLFRPWPERGEIVALTGHLAENELRGGLTFIERALGVEKAREFYE QESGAALSQSELARRLAADGFPVQRSHITRMADAVRYLLPAIPTVLYGGLGRHQVERLSVMRTACKRTWEHYAKDRSLPL DFDSFFQEVLAQFDTQGDEFAPQRVQDELIGQMSELLGIGYDVLALDLTESESRHRALVSDPTPPAAQPALPSPTAGTPT PPGAASSIATPAAAAGPPPASPPASEPTLRHDDTAVGEAATGSQPAAPGDLLREHIVSPAPTTERLQSIQRMVADQLGDA LPPDFSASVLQSIPVQAGGLYPISDVWYIDAGLDTPDRLRIHIAQFAREIAGEAGLDECIEDRADGIGFACRARGQAPSP LGRAVLTLLTSLTGQPVAEAGLDGAQLAADLPTLLHGQSQGHGSGARRLSDTALVKLFRLLRLARRLLDLEAGTTAPGT >Mature_558_residues ADMTSQDMAGKLLAAGFERSGPAATALSDPIADTPMVVTLDQLRPYDHDPRMKRNPAYEEIKASIRERGLDAAPAITRRP GEDHYIIRNGGNTRLAILRELWSETKEERFFRISCLFRPWPERGEIVALTGHLAENELRGGLTFIERALGVEKAREFYEQ ESGAALSQSELARRLAADGFPVQRSHITRMADAVRYLLPAIPTVLYGGLGRHQVERLSVMRTACKRTWEHYAKDRSLPLD FDSFFQEVLAQFDTQGDEFAPQRVQDELIGQMSELLGIGYDVLALDLTESESRHRALVSDPTPPAAQPALPSPTAGTPTP PGAASSIATPAAAAGPPPASPPASEPTLRHDDTAVGEAATGSQPAAPGDLLREHIVSPAPTTERLQSIQRMVADQLGDAL PPDFSASVLQSIPVQAGGLYPISDVWYIDAGLDTPDRLRIHIAQFAREIAGEAGLDECIEDRADGIGFACRARGQAPSPL GRAVLTLLTSLTGQPVAEAGLDGAQLAADLPTLLHGQSQGHGSGARRLSDTALVKLFRLLRLARRLLDLEAGTTAPGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60183; Mature: 60051
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADMTSQDMAGKLLAAGFERSGPAATALSDPIADTPMVVTLDQLRPYDHDPRMKRNPAYE CCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCHH EIKASIRERGLDAAPAITRRPGEDHYIIRNGGNTRLAILRELWSETKEERFFRISCLFRP HHHHHHHHCCCCCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEEECC WPERGEIVALTGHLAENELRGGLTFIERALGVEKAREFYEQESGAALSQSELARRLAADG CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC FPVQRSHITRMADAVRYLLPAIPTVLYGGLGRHQVERLSVMRTACKRTWEHYAKDRSLPL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DFDSFFQEVLAQFDTQGDEFAPQRVQDELIGQMSELLGIGYDVLALDLTESESRHRALVS CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCC DPTPPAAQPALPSPTAGTPTPPGAASSIATPAAAAGPPPASPPASEPTLRHDDTAVGEAA CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGSQPAAPGDLLREHIVSPAPTTERLQSIQRMVADQLGDALPPDFSASVLQSIPVQAGGL CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCC YPISDVWYIDAGLDTPDRLRIHIAQFAREIAGEAGLDECIEDRADGIGFACRARGQAPSP CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCH LGRAVLTLLTSLTGQPVAEAGLDGAQLAADLPTLLHGQSQGHGSGARRLSDTALVKLFRL HHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LRLARRLLDLEAGTTAPGT HHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ADMTSQDMAGKLLAAGFERSGPAATALSDPIADTPMVVTLDQLRPYDHDPRMKRNPAYE CCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEHHHHCCCCCCCCCCCCCCHH EIKASIRERGLDAAPAITRRPGEDHYIIRNGGNTRLAILRELWSETKEERFFRISCLFRP HHHHHHHHCCCCCCCHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEEEEEEEECC WPERGEIVALTGHLAENELRGGLTFIERALGVEKAREFYEQESGAALSQSELARRLAADG CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC FPVQRSHITRMADAVRYLLPAIPTVLYGGLGRHQVERLSVMRTACKRTWEHYAKDRSLPL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DFDSFFQEVLAQFDTQGDEFAPQRVQDELIGQMSELLGIGYDVLALDLTESESRHRALVS CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCC DPTPPAAQPALPSPTAGTPTPPGAASSIATPAAAAGPPPASPPASEPTLRHDDTAVGEAA CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TGSQPAAPGDLLREHIVSPAPTTERLQSIQRMVADQLGDALPPDFSASVLQSIPVQAGGL CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCC YPISDVWYIDAGLDTPDRLRIHIAQFAREIAGEAGLDECIEDRADGIGFACRARGQAPSP CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCH LGRAVLTLLTSLTGQPVAEAGLDGAQLAADLPTLLHGQSQGHGSGARRLSDTALVKLFRL HHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LRLARRLLDLEAGTTAPGT HHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA