Click here to switch to the map view.

The map label for this gene is ybaL [H]

Identifier: 94311223

GI number: 94311223

Start: 2506827

End: 2508053

Strand: Reverse

Name: ybaL [H]

Synonym: Rmet_2285

Alternate gene names: 94311223

Gene position: 2508053-2506827 (Counterclockwise)

Preceding gene: 94311225

Following gene: 94311221

Centisome position: 63.85

GC content: 63.49

Gene sequence:

>1227_bases
ATGCATCACGCCACCCCGCTCATCAGCACAATCGTCGGCGGTATCGTGCTGGCGTTCATTCTGGGTGCGATTGCCAACAA
GTTCAGGCTACCACCGCTGATCGGCTATCTTTGCGCGGGCATCGTCGTGGGGCCGCATACGCCTGGCTACACGGCAGATC
AGACGCTGGCGCCGGAGCTTGCGGAGCTAGGCGTGATCCTGCTGATGTTCGGCGTCGGGCTGCATTTCTCGGTCAAGGAC
CTGATGGCCGTGAAGCGAATCGCCATTCCGGGGGCGATCGTCCAGATCAGCATCGCCACGGCTCTCAGCATGTTGGTGGC
CTGGGGGTTCGACTGGTCCTGGGGGCAAGGGCTCGTGTACGGGCTGGCACTCTCGGTGGCCAGTACCGTGGTGCTGCTGC
GCGCGCTGCAAGAGCGCGATTTGATCGAGTCGCCACAAGGCCGCATTGCCGTGGGCTGGCTGATCGTCGAAGATCTCGCG
ATGGTGCTGACGCTGGTGTTGCTGCCGGCCATGGCGCGATTGCTTGGTGGCGGTGATGCCAATGCGACAGCGCCGACCAC
GATGGAGGTACTGATCGAGGTCCTCTCCACGCTTGGCAAGGTGGCCGCGTTCGTCGCGGTGATGCTGGTGATTGGCCGGC
GCTTCATTCCGTGGATGCTTGAGCGCATTGTCTGGACCGGTAGTCGCGAGTTGTTCCGCCTTGGGGTGCTGGCCACCGCG
CTGGGTGTGGCCTTCGGCGCCTATGCGTTGTTCGGCGTGTCGTTTGCCCTCGGCGCCTTCTTCGCCGGCATGGTGCTGGC
CGAATCGGAATTCAGCCATCGCGCGGCAGAGGAATCACTGCCGCTGCGCGATGCCTTCTCGGTGCTGTTCTTCGTCTCGG
TGGGCATGCTGTTCGACCCAATGGTGCTCGTCAACGACCCCTGGGGGGTGCTGGCGACGCTCCTGATTATCGTCGTCGGC
AAGTCGCTCGCCGCGCTCGGCATCGTGCGGGCCTTTGGCCTGAATAACCGGACCGGTCTGACGATTGCCGTGAGCCTCGC
GCAGATCGGCGAGTTCTCCTTCATTCTGGCCAGCCTCGGTGTCTATCTGGACATCCTGCCAGAGCGGGGGCAGGCGCTGA
TCCTTGCGGGTGCATTGCTGTCGATCGTGCTCAATCCCGTGCTGTTTCACCTGCTCGACCGCTACACCGCGCGCGAAGAC
AAGCAGGGTGATCCGCAACCTGCCTGA

Upstream 100 bases:

>100_bases
TCGCGGGGGCATGATCTCGTCGTGCGATGCCCGTAAGGGCGGCCACGAGGGGCGGGTGGTCCCCAGAACATCGAGACAAC
CATAAAGGAACCCCAGACGC

Downstream 100 bases:

>100_bases
TCGGTTGCCGCATAATCTTGTCAGGCGCCGAGACTTGGCGCCACGCCTCGCAGGTACTCGGTAAACGCAAGCAGCCCCTG
GGTGGGAAACTTGTCCTGAT

Product: monovalent cation:proton antiporter (CPA2 family)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MHHATPLISTIVGGIVLAFILGAIANKFRLPPLIGYLCAGIVVGPHTPGYTADQTLAPELAELGVILLMFGVGLHFSVKD
LMAVKRIAIPGAIVQISIATALSMLVAWGFDWSWGQGLVYGLALSVASTVVLLRALQERDLIESPQGRIAVGWLIVEDLA
MVLTLVLLPAMARLLGGGDANATAPTTMEVLIEVLSTLGKVAAFVAVMLVIGRRFIPWMLERIVWTGSRELFRLGVLATA
LGVAFGAYALFGVSFALGAFFAGMVLAESEFSHRAAEESLPLRDAFSVLFFVSVGMLFDPMVLVNDPWGVLATLLIIVVG
KSLAALGIVRAFGLNNRTGLTIAVSLAQIGEFSFILASLGVYLDILPERGQALILAGALLSIVLNPVLFHLLDRYTARED
KQGDPQPA

Sequences:

>Translated_408_residues
MHHATPLISTIVGGIVLAFILGAIANKFRLPPLIGYLCAGIVVGPHTPGYTADQTLAPELAELGVILLMFGVGLHFSVKD
LMAVKRIAIPGAIVQISIATALSMLVAWGFDWSWGQGLVYGLALSVASTVVLLRALQERDLIESPQGRIAVGWLIVEDLA
MVLTLVLLPAMARLLGGGDANATAPTTMEVLIEVLSTLGKVAAFVAVMLVIGRRFIPWMLERIVWTGSRELFRLGVLATA
LGVAFGAYALFGVSFALGAFFAGMVLAESEFSHRAAEESLPLRDAFSVLFFVSVGMLFDPMVLVNDPWGVLATLLIIVVG
KSLAALGIVRAFGLNNRTGLTIAVSLAQIGEFSFILASLGVYLDILPERGQALILAGALLSIVLNPVLFHLLDRYTARED
KQGDPQPA
>Mature_408_residues
MHHATPLISTIVGGIVLAFILGAIANKFRLPPLIGYLCAGIVVGPHTPGYTADQTLAPELAELGVILLMFGVGLHFSVKD
LMAVKRIAIPGAIVQISIATALSMLVAWGFDWSWGQGLVYGLALSVASTVVLLRALQERDLIESPQGRIAVGWLIVEDLA
MVLTLVLLPAMARLLGGGDANATAPTTMEVLIEVLSTLGKVAAFVAVMLVIGRRFIPWMLERIVWTGSRELFRLGVLATA
LGVAFGAYALFGVSFALGAFFAGMVLAESEFSHRAAEESLPLRDAFSVLFFVSVGMLFDPMVLVNDPWGVLATLLIIVVG
KSLAALGIVRAFGLNNRTGLTIAVSLAQIGEFSFILASLGVYLDILPERGQALILAGALLSIVLNPVLFHLLDRYTARED
KQGDPQPA

Specific function: Unknown

COG id: COG4651

COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI157388921, Length=376, Percent_Identity=27.3936170212766, Blast_Score=79, Evalue=6e-15,
Organism=Escherichia coli, GI1786685, Length=399, Percent_Identity=67.4185463659148, Blast_Score=494, Evalue=1e-141,
Organism=Escherichia coli, GI1789749, Length=387, Percent_Identity=30.2325581395349, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1786232, Length=395, Percent_Identity=30.126582278481, Blast_Score=125, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006153
- InterPro:   IPR004771
- InterPro:   IPR016040
- InterPro:   IPR003148 [H]

Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 43350; Mature: 43350

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHATPLISTIVGGIVLAFILGAIANKFRLPPLIGYLCAGIVVGPHTPGYTADQTLAPEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCHHHHHH
AELGVILLMFGVGLHFSVKDLMAVKRIAIPGAIVQISIATALSMLVAWGFDWSWGQGLVY
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
GLALSVASTVVLLRALQERDLIESPQGRIAVGWLIVEDLAMVLTLVLLPAMARLLGGGDA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NATAPTTMEVLIEVLSTLGKVAAFVAVMLVIGRRFIPWMLERIVWTGSRELFRLGVLATA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LGVAFGAYALFGVSFALGAFFAGMVLAESEFSHRAAEESLPLRDAFSVLFFVSVGMLFDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
MVLVNDPWGVLATLLIIVVGKSLAALGIVRAFGLNNRTGLTIAVSLAQIGEFSFILASLG
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHH
VYLDILPERGQALILAGALLSIVLNPVLFHLLDRYTAREDKQGDPQPA
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MHHATPLISTIVGGIVLAFILGAIANKFRLPPLIGYLCAGIVVGPHTPGYTADQTLAPEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCCCCCCHHHHHH
AELGVILLMFGVGLHFSVKDLMAVKRIAIPGAIVQISIATALSMLVAWGFDWSWGQGLVY
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
GLALSVASTVVLLRALQERDLIESPQGRIAVGWLIVEDLAMVLTLVLLPAMARLLGGGDA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NATAPTTMEVLIEVLSTLGKVAAFVAVMLVIGRRFIPWMLERIVWTGSRELFRLGVLATA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LGVAFGAYALFGVSFALGAFFAGMVLAESEFSHRAAEESLPLRDAFSVLFFVSVGMLFDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
MVLVNDPWGVLATLLIIVVGKSLAALGIVRAFGLNNRTGLTIAVSLAQIGEFSFILASLG
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHH
VYLDILPERGQALILAGALLSIVLNPVLFHLLDRYTAREDKQGDPQPA
HHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 7721718 [H]