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The map label for this gene is yeiE [H]

Identifier: 94311222

GI number: 94311222

Start: 2505889

End: 2506806

Strand: Direct

Name: yeiE [H]

Synonym: Rmet_2284

Alternate gene names: 94311222

Gene position: 2505889-2506806 (Clockwise)

Preceding gene: 94311218

Following gene: 94311226

Centisome position: 63.79

GC content: 63.62

Gene sequence:

>918_bases
ATGGATCAGCGGCCGCTACGCCTTACCTTGCGCCAACTGCAGGTGTTCGTGGCTGTGGCCCAGCACGGCAGCACAATCGC
CGCGGCCGACGCCCTTGCGATGTCGCAATCGGCCGTCAGCGCATCGCTGGCCGAGCTTGAGCGGGCATTGAACGGGGCGC
TATTCGACCGGGTGGCCAGACGCCTTGCGATCAATGAAGCGGGACGGCAGTTCTTTCCCCGCGCACTATCGCTACTCGAT
CAAGCGCAGGAACTGGAGCGCTTCGCCTCGGAAGGTGGTGTCCAGTTGCGCATCGCCGCCAGCAACACCATCGGCAGCTA
TATCCTGCCCGCCTTGCTGGCGGGATTCCGCAATGCCCAGACTGGCCCATGCGCACTCGACCTCCGCATCGGCAACACGC
AGGATGTGTTGCAGTCACTGATGAAGTTCGAGGCCGACATCGGCCTGATAGAAGGCACGAGCCAGGAGCGCGATCTGCGC
AGCGTGCATTGGTGCGATGACGAGATGGTGGTGGTCGTTGGGCCTACGCATCCGTTGGCCGTCGCGGGAGAGCAATCGCC
GCAGTTTCACGACATGCTGCGCGACGCAGATTGGATCGTGCGAGAACCAGGTTCCGGCACGCGTGAAATCATCGAGGCCC
GCCTGGTACCCGAACTGGGCGCGCTGCGCTTTGCACTGGAACTCGGCAATGCAGAAGCCATCAAGCGCGCCGTCATGAGC
GGATTCGGCGTCAGTTGCCTGTCGTTGCACGTCGTACGCGACGAAATCGAGCGTGGGCTGCTCGTCGCACTACGAAGCGA
CCTGCCCCGCGTGATCCGCCCGCTCCAGCTGGTCGTCCATCAGGACAAGTTTCCCACCCAGGGGCTGCTTGCGTTTACCG
AGTACCTGCGAGGCGTGGCGCCAAGTCTCGGCGCCTGA

Upstream 100 bases:

>100_bases
CGGCAACTGGTTTTCGTTCGATGCCATGTAGGGTATCGACGTACACCTAACCCGTAAAACGGGTAATATTGGTAGTCGTA
ACCCTAAATATCGATAAATA

Downstream 100 bases:

>100_bases
CAAGATTATGCGGCAACCGATCAGGCAGGTTGCGGATCACCCTGCTTGTCTTCGCGCGCGGTGTAGCGGTCGAGCAGGTG
AAACAGCACGGGATTGAGCA

Product: putative DNA-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MDQRPLRLTLRQLQVFVAVAQHGSTIAAADALAMSQSAVSASLAELERALNGALFDRVARRLAINEAGRQFFPRALSLLD
QAQELERFASEGGVQLRIAASNTIGSYILPALLAGFRNAQTGPCALDLRIGNTQDVLQSLMKFEADIGLIEGTSQERDLR
SVHWCDDEMVVVVGPTHPLAVAGEQSPQFHDMLRDADWIVREPGSGTREIIEARLVPELGALRFALELGNAEAIKRAVMS
GFGVSCLSLHVVRDEIERGLLVALRSDLPRVIRPLQLVVHQDKFPTQGLLAFTEYLRGVAPSLGA

Sequences:

>Translated_305_residues
MDQRPLRLTLRQLQVFVAVAQHGSTIAAADALAMSQSAVSASLAELERALNGALFDRVARRLAINEAGRQFFPRALSLLD
QAQELERFASEGGVQLRIAASNTIGSYILPALLAGFRNAQTGPCALDLRIGNTQDVLQSLMKFEADIGLIEGTSQERDLR
SVHWCDDEMVVVVGPTHPLAVAGEQSPQFHDMLRDADWIVREPGSGTREIIEARLVPELGALRFALELGNAEAIKRAVMS
GFGVSCLSLHVVRDEIERGLLVALRSDLPRVIRPLQLVVHQDKFPTQGLLAFTEYLRGVAPSLGA
>Mature_305_residues
MDQRPLRLTLRQLQVFVAVAQHGSTIAAADALAMSQSAVSASLAELERALNGALFDRVARRLAINEAGRQFFPRALSLLD
QAQELERFASEGGVQLRIAASNTIGSYILPALLAGFRNAQTGPCALDLRIGNTQDVLQSLMKFEADIGLIEGTSQERDLR
SVHWCDDEMVVVVGPTHPLAVAGEQSPQFHDMLRDADWIVREPGSGTREIIEARLVPELGALRFALELGNAEAIKRAVMS
GFGVSCLSLHVVRDEIERGLLVALRSDLPRVIRPLQLVVHQDKFPTQGLLAFTEYLRGVAPSLGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=290, Percent_Identity=45.8620689655172, Blast_Score=245, Evalue=3e-66,
Organism=Escherichia coli, GI87082132, Length=261, Percent_Identity=27.5862068965517, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1786401, Length=298, Percent_Identity=27.5167785234899, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI157672245, Length=200, Percent_Identity=32, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787128, Length=308, Percent_Identity=25.3246753246753, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788748, Length=246, Percent_Identity=28.8617886178862, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788887, Length=176, Percent_Identity=30.1136363636364, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87081904, Length=179, Percent_Identity=31.2849162011173, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1790399, Length=178, Percent_Identity=26.4044943820225, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33190; Mature: 33190

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQRPLRLTLRQLQVFVAVAQHGSTIAAADALAMSQSAVSASLAELERALNGALFDRVAR
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAINEAGRQFFPRALSLLDQAQELERFASEGGVQLRIAASNTIGSYILPALLAGFRNAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCC
TGPCALDLRIGNTQDVLQSLMKFEADIGLIEGTSQERDLRSVHWCDDEMVVVVGPTHPLA
CCCEEEEEEECCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCEEEEECCCCCEE
VAGEQSPQFHDMLRDADWIVREPGSGTREIIEARLVPELGALRFALELGNAEAIKRAVMS
ECCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHH
GFGVSCLSLHVVRDEIERGLLVALRSDLPRVIRPLQLVVHQDKFPTQGLLAFTEYLRGVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PSLGA
CCCCC
>Mature Secondary Structure
MDQRPLRLTLRQLQVFVAVAQHGSTIAAADALAMSQSAVSASLAELERALNGALFDRVAR
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAINEAGRQFFPRALSLLDQAQELERFASEGGVQLRIAASNTIGSYILPALLAGFRNAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCC
TGPCALDLRIGNTQDVLQSLMKFEADIGLIEGTSQERDLRSVHWCDDEMVVVVGPTHPLA
CCCEEEEEEECCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCCCCCEEEEECCCCCEE
VAGEQSPQFHDMLRDADWIVREPGSGTREIIEARLVPELGALRFALELGNAEAIKRAVMS
ECCCCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHH
GFGVSCLSLHVVRDEIERGLLVALRSDLPRVIRPLQLVVHQDKFPTQGLLAFTEYLRGVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PSLGA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]