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The map label for this gene is fliD1 [H]

Identifier: 94311205

GI number: 94311205

Start: 2485943

End: 2487439

Strand: Reverse

Name: fliD1 [H]

Synonym: Rmet_2267

Alternate gene names: 94311205

Gene position: 2487439-2485943 (Counterclockwise)

Preceding gene: 94311206

Following gene: 335055589

Centisome position: 63.32

GC content: 60.05

Gene sequence:

>1497_bases
ATGACTACGACATCCAGTACGACTTCCGCCTCAAGCTCCGGCCTGATATCCAACCTCGGCGTTGGTTCCGGACTTGATCT
GAGCTCCTTGCTCGATCAGCTCACTCAGGCCGAGCAGGCACCGCTGACCGCGATCACCCAGGAGCAGCAGAGCTACCAGA
CCAAGCTCTCCGCATATGGGCAGATCCAGAGCATGCTGGCGGCATTCCAAGGCTCGGCCAGCCAGCTTGCCAGTCAGTCC
TTCTTCCAGGCAACGACTGCCAGTTCCAGCAATACCGCCGTGTTGAGTGCAGCTGGCAGTAATACGGCGGCCACCGGCAA
CTATGCGGTCAACGTCACGCAACTCGCGCAGGCGCAATCGCTCGTCTCGAAGGGACAGGCCAACCAGGCCGCTGCCATCG
GCACCGGTACCATCCATGTCGATTTCGGCTCGATCTCCGGCGGCACGCTTGACAGCAATACGTCCAGCGCCACCTACGGT
ACATACACCGGGGCCACGTTCACGGCCAACAGCGCCAACACCGGCGTCGACATCACGATCGACAGCAGCCACAACACGCT
GCAGGGCATCGCCAGCGCGATTAACAACGCCAACGCCGGCGTCACCGCAAGCATCATCAACGACGGGTCCGGCACACCCT
ACCGCCTTGTGATCAACTCGAACAATACGGGTGCCACCAACAGCGTGCGGCTTTCGGTCAATGAAACCGATGGCGGCACG
GCGCTAGCGAACCTTGTTGGATACGATCCTGCCGGAACGCAGAACCTGCAGCAGACCGTTGCTGCCCAGAATTCCCAGCT
CACGGTCAACAATATCGCCATCCAGAGCACCAGCAACACCGTGAGCGACGCGGTGGCCGGCGTGACCATGACATTGGCGC
AGACAGGTACCAGCAGCGTCTCGGTGCAACGCGACACCAGCTCGATCATGACGGGCATACAGGGATTCGTCACCGCGTAC
AACAACCTCCAGAGCACCTCTGCCTCGCTGTCTGCATATGACCCCAGCACTCAGACGGCTTCGCCGCTGACCGGAGACTC
CACGTTGAGCATCATGCAGTCGCAGATGCGCAGCCTGCTGAATACGCCCCAGTCGAACAACGCCCTCACCACGCTCTCGC
AGATCGGCATCTCGTTCCAGGACGACGGTACGCTGGCGGTCGACACCAGCAAGCTGACCACGGCGCTGAACAACAATGCC
GGCGCGGTGGCCAACCTGTTCGGCAACACCGACGGCGTAAGTGGCTATGGCAATCAGATCAGCACGTTGGTCAAGAACCT
GACCAGCAGTACCGGTGCACTGACCACGGCAACCGCGGGCATCAACAACACACTCAAGGATCTGAGCAATCAGTACGATC
AGACGCAGACGCAAATCAACGCGGATATCGCCAACTACAAGGCGCAATTCACGCAGCTCGACGTGATCATGTCGCAGATG
CAGAGCACCAGTGCCTACCTGACGCAGCAGTTCTCGACCAGTAGTAGCAAGGGATAA

Upstream 100 bases:

>100_bases
TTGCGTGCAGAACAAGCAATAGCCTGGTTGCAGAACCTGGGCATTGCTCAGGCTGCCCGATATCGTCACAGACGAAATAT
CCCCTCACCAGAAGCGAGTC

Downstream 100 bases:

>100_bases
CGTCGGAAGAGCGAGGGCACTGCCGTCTGGTGACGGCGGTGCCTGCCGTGACCCTGTGTCCGACGCACAGGGTCACGGCC
AGGGGGCAGGGCAAAAGAGC

Product: flagellar filament capping-like protein (fliD-like)

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MTTTSSTTSASSSGLISNLGVGSGLDLSSLLDQLTQAEQAPLTAITQEQQSYQTKLSAYGQIQSMLAAFQGSASQLASQS
FFQATTASSSNTAVLSAAGSNTAATGNYAVNVTQLAQAQSLVSKGQANQAAAIGTGTIHVDFGSISGGTLDSNTSSATYG
TYTGATFTANSANTGVDITIDSSHNTLQGIASAINNANAGVTASIINDGSGTPYRLVINSNNTGATNSVRLSVNETDGGT
ALANLVGYDPAGTQNLQQTVAAQNSQLTVNNIAIQSTSNTVSDAVAGVTMTLAQTGTSSVSVQRDTSSIMTGIQGFVTAY
NNLQSTSASLSAYDPSTQTASPLTGDSTLSIMQSQMRSLLNTPQSNNALTTLSQIGISFQDDGTLAVDTSKLTTALNNNA
GAVANLFGNTDGVSGYGNQISTLVKNLTSSTGALTTATAGINNTLKDLSNQYDQTQTQINADIANYKAQFTQLDVIMSQM
QSTSAYLTQQFSTSSSKG

Sequences:

>Translated_498_residues
MTTTSSTTSASSSGLISNLGVGSGLDLSSLLDQLTQAEQAPLTAITQEQQSYQTKLSAYGQIQSMLAAFQGSASQLASQS
FFQATTASSSNTAVLSAAGSNTAATGNYAVNVTQLAQAQSLVSKGQANQAAAIGTGTIHVDFGSISGGTLDSNTSSATYG
TYTGATFTANSANTGVDITIDSSHNTLQGIASAINNANAGVTASIINDGSGTPYRLVINSNNTGATNSVRLSVNETDGGT
ALANLVGYDPAGTQNLQQTVAAQNSQLTVNNIAIQSTSNTVSDAVAGVTMTLAQTGTSSVSVQRDTSSIMTGIQGFVTAY
NNLQSTSASLSAYDPSTQTASPLTGDSTLSIMQSQMRSLLNTPQSNNALTTLSQIGISFQDDGTLAVDTSKLTTALNNNA
GAVANLFGNTDGVSGYGNQISTLVKNLTSSTGALTTATAGINNTLKDLSNQYDQTQTQINADIANYKAQFTQLDVIMSQM
QSTSAYLTQQFSTSSSKG
>Mature_497_residues
TTTSSTTSASSSGLISNLGVGSGLDLSSLLDQLTQAEQAPLTAITQEQQSYQTKLSAYGQIQSMLAAFQGSASQLASQSF
FQATTASSSNTAVLSAAGSNTAATGNYAVNVTQLAQAQSLVSKGQANQAAAIGTGTIHVDFGSISGGTLDSNTSSATYGT
YTGATFTANSANTGVDITIDSSHNTLQGIASAINNANAGVTASIINDGSGTPYRLVINSNNTGATNSVRLSVNETDGGTA
LANLVGYDPAGTQNLQQTVAAQNSQLTVNNIAIQSTSNTVSDAVAGVTMTLAQTGTSSVSVQRDTSSIMTGIQGFVTAYN
NLQSTSASLSAYDPSTQTASPLTGDSTLSIMQSQMRSLLNTPQSNNALTTLSQIGISFQDDGTLAVDTSKLTTALNNNAG
AVANLFGNTDGVSGYGNQISTLVKNLTSSTGALTTATAGINNTLKDLSNQYDQTQTQINADIANYKAQFTQLDVIMSQMQ
STSAYLTQQFSTSSSKG

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=492, Percent_Identity=40.650406504065, Blast_Score=276, Evalue=3e-75,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 50658; Mature: 50527

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTSSTTSASSSGLISNLGVGSGLDLSSLLDQLTQAEQAPLTAITQEQQSYQTKLSAYG
CCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QIQSMLAAFQGSASQLASQSFFQATTASSSNTAVLSAAGSNTAATGNYAVNVTQLAQAQS
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHH
LVSKGQANQAAAIGTGTIHVDFGSISGGTLDSNTSSATYGTYTGATFTANSANTGVDITI
HHHCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCCEECEECCCEEECCCCCCCEEEEE
DSSHNTLQGIASAINNANAGVTASIINDGSGTPYRLVINSNNTGATNSVRLSVNETDGGT
CCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCH
ALANLVGYDPAGTQNLQQTVAAQNSQLTVNNIAIQSTSNTVSDAVAGVTMTLAQTGTSSV
HHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHEEEEECCCCCCE
SVQRDTSSIMTGIQGFVTAYNNLQSTSASLSAYDPSTQTASPLTGDSTLSIMQSQMRSLL
EEECCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
NTPQSNNALTTLSQIGISFQDDGTLAVDTSKLTTALNNNAGAVANLFGNTDGVSGYGNQI
CCCCCCCHHHHHHHCCCEECCCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHH
STLVKNLTSSTGALTTATAGINNTLKDLSNQYDQTQTQINADIANYKAQFTQLDVIMSQM
HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSTSAYLTQQFSTSSSKG
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TTTSSTTSASSSGLISNLGVGSGLDLSSLLDQLTQAEQAPLTAITQEQQSYQTKLSAYG
CCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
QIQSMLAAFQGSASQLASQSFFQATTASSSNTAVLSAAGSNTAATGNYAVNVTQLAQAQS
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEHHHHHHHHH
LVSKGQANQAAAIGTGTIHVDFGSISGGTLDSNTSSATYGTYTGATFTANSANTGVDITI
HHHCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCCEECEECCCEEECCCCCCCEEEEE
DSSHNTLQGIASAINNANAGVTASIINDGSGTPYRLVINSNNTGATNSVRLSVNETDGGT
CCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCH
ALANLVGYDPAGTQNLQQTVAAQNSQLTVNNIAIQSTSNTVSDAVAGVTMTLAQTGTSSV
HHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHEEEEECCCCCCE
SVQRDTSSIMTGIQGFVTAYNNLQSTSASLSAYDPSTQTASPLTGDSTLSIMQSQMRSLL
EEECCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
NTPQSNNALTTLSQIGISFQDDGTLAVDTSKLTTALNNNAGAVANLFGNTDGVSGYGNQI
CCCCCCCHHHHHHHCCCEECCCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHH
STLVKNLTSSTGALTTATAGINNTLKDLSNQYDQTQTQINADIANYKAQFTQLDVIMSQM
HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSTSAYLTQQFSTSSSKG
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1527488; 9097040; 9278503; 2659972; 6305924 [H]