| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is dat [H]
Identifier: 94311187
GI number: 94311187
Start: 2463948
End: 2464796
Strand: Reverse
Name: dat [H]
Synonym: Rmet_2249
Alternate gene names: 94311187
Gene position: 2464796-2463948 (Counterclockwise)
Preceding gene: 335055587
Following gene: 94311186
Centisome position: 62.75
GC content: 63.49
Gene sequence:
>849_bases ATGTCTGAAACAGTCGTTTTCCTGAATGGGGAATTGCTTCCCCTGTCCGAAGCCCGCGTGCCAGTGCTCGATCGCGGGTT CATCTTCGGTGATGGCATCTACGAGGTGATTCCGCTCTACAACGGCAAGCCGTTCCGTGGCGCTCAGCATCTGGCGCGCC TGCAGCGCAGCCTTGCCTCGATCGGCATCCCCAACCCCTATTCGGAGACCGAATGGCTGGCGCTGATCGACCGCGTGGTC AAGGCCAACGGCCTGGGCGACCAGATGGTCTACATGCAGGTGACGCGCGGTGTGGCCAAACGGACCCATGCATTCCCGAC GGAAGTCACGCCGACCGTGCTGATCATGACCAACCCGATGGCACTGCCGCCGGCGGCATCGGTGGAGCAGGGTGTGGCCT GCGTGACGATGGAGGACCGCCGCTGGCTCAACTGCCAGATCAAGTCGACCTCGTTGCTCGGCAACGTGCTGGCCGCTCAG GTGGCCGCCGAGGCAGGCGTCACCGAGGCGATCCAGTTTCGCGATGGCAATCTGACCGAAGCATCGTCATCGAACGTCTG GCTGGTCAAAAATGGCCGCGTCTATGCGCCGCCCAAGGACAACCTGATCCTGGAAGGTATCCGCTATGGCCTGATGGAAG AGCTCTGCGCGGCGATGGACATCCCGTTCGAGGCCCGCCGCATCACGCGCGACGAGGTGTTCTCCGCCGACGAAGTCCTG CTGTCGTCGGCCAGCAAGGAGCTGTTGCCGGTGGTGACAATCGACGGCAAGACCATCGGCGCGGGCAAGCCCGGCCCGGT GTTCCAGCGCCTGTTTGCGGCGTATCAGGCAGCCAAGTCGGCGCTATGA
Upstream 100 bases:
>100_bases CGGAGGGGCGATGCCGCGACGACATGCCGAAATTGCATAAAGGCAGCCCGCGCCATGTGAAAGAATTCACTTCACAATCT TCCTTGCCCAAATATTGACC
Downstream 100 bases:
>100_bases CAAGCGTCATGTCCCTGCGGTGGTCGCGTGCTAGGATGGCGCGCACGAACCACCGAAAGGAGGCTGCTCATGGCCAAGCG CGAGCGCAGCCGGCATGCCA
Product: D-amino-acid transaminase
Products: NA
Alternate protein names: D-amino acid aminotransferase; D-amino acid transaminase; DAAT; D-aspartate aminotransferase [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSETVVFLNGELLPLSEARVPVLDRGFIFGDGIYEVIPLYNGKPFRGAQHLARLQRSLASIGIPNPYSETEWLALIDRVV KANGLGDQMVYMQVTRGVAKRTHAFPTEVTPTVLIMTNPMALPPAASVEQGVACVTMEDRRWLNCQIKSTSLLGNVLAAQ VAAEAGVTEAIQFRDGNLTEASSSNVWLVKNGRVYAPPKDNLILEGIRYGLMEELCAAMDIPFEARRITRDEVFSADEVL LSSASKELLPVVTIDGKTIGAGKPGPVFQRLFAAYQAAKSAL
Sequences:
>Translated_282_residues MSETVVFLNGELLPLSEARVPVLDRGFIFGDGIYEVIPLYNGKPFRGAQHLARLQRSLASIGIPNPYSETEWLALIDRVV KANGLGDQMVYMQVTRGVAKRTHAFPTEVTPTVLIMTNPMALPPAASVEQGVACVTMEDRRWLNCQIKSTSLLGNVLAAQ VAAEAGVTEAIQFRDGNLTEASSSNVWLVKNGRVYAPPKDNLILEGIRYGLMEELCAAMDIPFEARRITRDEVFSADEVL LSSASKELLPVVTIDGKTIGAGKPGPVFQRLFAAYQAAKSAL >Mature_281_residues SETVVFLNGELLPLSEARVPVLDRGFIFGDGIYEVIPLYNGKPFRGAQHLARLQRSLASIGIPNPYSETEWLALIDRVVK ANGLGDQMVYMQVTRGVAKRTHAFPTEVTPTVLIMTNPMALPPAASVEQGVACVTMEDRRWLNCQIKSTSLLGNVLAAQV AAEAGVTEAIQFRDGNLTEASSSNVWLVKNGRVYAPPKDNLILEGIRYGLMEELCAAMDIPFEARRITRDEVFSADEVLL SSASKELLPVVTIDGKTIGAGKPGPVFQRLFAAYQAAKSAL
Specific function: Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Escherichia coli, GI48994963, Length=281, Percent_Identity=27.0462633451957, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005784 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.21 [H]
Molecular weight: Translated: 30649; Mature: 30518
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETVVFLNGELLPLSEARVPVLDRGFIFGDGIYEVIPLYNGKPFRGAQHLARLQRSLAS CCCEEEEECCCEEECCCCCCCEEECCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHH IGIPNPYSETEWLALIDRVVKANGLGDQMVYMQVTRGVAKRTHAFPTEVTPTVLIMTNPM CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC ALPPAASVEQGVACVTMEDRRWLNCQIKSTSLLGNVLAAQVAAEAGVTEAIQFRDGNLTE CCCCCCCHHCCEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHCCCHHEEEECCCCCCC ASSSNVWLVKNGRVYAPPKDNLILEGIRYGLMEELCAAMDIPFEARRITRDEVFSADEVL CCCCCEEEEECCEEECCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH LSSASKELLPVVTIDGKTIGAGKPGPVFQRLFAAYQAAKSAL HHCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SETVVFLNGELLPLSEARVPVLDRGFIFGDGIYEVIPLYNGKPFRGAQHLARLQRSLAS CCEEEEECCCEEECCCCCCCEEECCEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHH IGIPNPYSETEWLALIDRVVKANGLGDQMVYMQVTRGVAKRTHAFPTEVTPTVLIMTNPM CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC ALPPAASVEQGVACVTMEDRRWLNCQIKSTSLLGNVLAAQVAAEAGVTEAIQFRDGNLTE CCCCCCCHHCCEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHCCCHHEEEECCCCCCC ASSSNVWLVKNGRVYAPPKDNLILEGIRYGLMEELCAAMDIPFEARRITRDEVFSADEVL CCCCCEEEEECCEEECCCCCCEEHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH LSSASKELLPVVTIDGKTIGAGKPGPVFQRLFAAYQAAKSAL HHCCCCCCEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA