BacMap

Definition	Cupriavidus metallidurans CH34 chromosome, complete genome.
Accession	NC_007973
Length	3,928,089

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The map label for this gene is yurJ [H]

Identifier: 94311172

GI number: 94311172

Start: 2449285

End: 2450409

Strand: Reverse

Name: yurJ [H]

Synonym: Rmet_2234

Alternate gene names: 94311172

Gene position: 2450409-2449285 (Counterclockwise)

Preceding gene: 94311174

Following gene: 94311171

Centisome position: 62.38

GC content: 66.67

Gene sequence:

>1125_bases
ATGCAGCTCAGCCTGGAAGGCATTGCGCAGCACGTGGGATCGCAAGCCTATCTTTACTCGATGTCGCTGGCCCCCGTGCC
TGGCGCCGTCACGATCCTGCTGGGAACGACCCAGGCGGGCAAGACATCGCTGATGCGGGTCATGGCAGGGCTGGACAAGC
CCACCGCGGGCCGCGTGCTGGTAGACGGCGCCGACGTGACCGGCGTGCCGGTGCGGGAACGCAACGTGTCGATGGTCTAT
CAGCAGTTCATCAACTACCCGTCGCTGCGCGTCTTCGACAACATTGCATCGCCGTTGCGGCTGCGGCGGGATCGCCAGGC
TGACGTCGACGCGCGTGTTCGCTCGCTGGCGGGGCGCCTGCACATCGAACATCTGCTCGACCGGTATCCCTCGGAGCTAT
CTGGTGGCCAGCAGCAGCGTGTGGCCCTGGCCCGCGCGCTGGCCAAGAATGCGCCGCTGATGCTGCTCGATGAGCCCCTG
GTCAACCTCGACTACAAGCTGCGCGAGGAACTGCGCGAGGAACTGACGCAACTCTTCGCGCAGGGCGATGCCACCGTGAT
TTACGCCACTACCGAGCCGGCCGAAGCGCTGCTGCTCGGTGGCCATACCGCCGTGCTCGACGCTGGCGAACTGCTTCAGT
ATGGCCCGACGCCGGAGGTGTTCCACTATCCGGCGTCACTGCGCGTGGCGCGCGCCTTCAGCGATCCGCCGATGAATCTT
CTCGAAGGTGTGCTGGGGCATGGCCGCGTCGTGCTGGCCGGCAACATTTCCATCCCGATGCCGGACGTGGCCCATGCCGA
TGGGCCGGTAACGGTGGGCGTGCGTGCTGGCGCGCTGCGGCTCGACGCCGTGCCACAGGCTGTGGCCGTGCCGGGCAGGG
TGGCGCTGGCTGAACTGTCGGGTTCGGATACGTTCGTGCATGTCGATACACCCGCCGGCAATCTGGTGGCCCAGCTTACC
GGTGTGCGCGATCTCGAACTGGGCGCGCAGTTGTCGCTCCATATCGAGCCAGCGCAGATCTACCTGTTCAACGCGGACGG
CGATCGCATACACGCGCCGCGCCGTCCAGGCATGTCGCCGGCATCGGCAGGCCCGGTCGCCGCGATTACCGAGTCGGGAG
CCTGA

Upstream 100 bases:

>100_bases
TCGTTTTTGAGCTAAAACGAGCGGGTTGCTATGAAAAGTGCGCCTCAGCCGCAGGTTTTCGAAGTGGCTGAGCTGTCACA
AGAAGAATATTGGAGACTGG

Downstream 100 bases:

>100_bases
TATGGCACGCATCGATCTCGACCTCGCGCACGCCTATGTCGCCAATCCTCAGAAGGATGAGGACTACGCGCTGCTGCCAC
TACATTTCACGTTCGAGGAT

Product: ABC transporter ATPase

Products: ADP; phosphate; maltose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MQLSLEGIAQHVGSQAYLYSMSLAPVPGAVTILLGTTQAGKTSLMRVMAGLDKPTAGRVLVDGADVTGVPVRERNVSMVY
QQFINYPSLRVFDNIASPLRLRRDRQADVDARVRSLAGRLHIEHLLDRYPSELSGGQQQRVALARALAKNAPLMLLDEPL
VNLDYKLREELREELTQLFAQGDATVIYATTEPAEALLLGGHTAVLDAGELLQYGPTPEVFHYPASLRVARAFSDPPMNL
LEGVLGHGRVVLAGNISIPMPDVAHADGPVTVGVRAGALRLDAVPQAVAVPGRVALAELSGSDTFVHVDTPAGNLVAQLT
GVRDLELGAQLSLHIEPAQIYLFNADGDRIHAPRRPGMSPASAGPVAAITESGA

Sequences:

>Translated_374_residues
MQLSLEGIAQHVGSQAYLYSMSLAPVPGAVTILLGTTQAGKTSLMRVMAGLDKPTAGRVLVDGADVTGVPVRERNVSMVY
QQFINYPSLRVFDNIASPLRLRRDRQADVDARVRSLAGRLHIEHLLDRYPSELSGGQQQRVALARALAKNAPLMLLDEPL
VNLDYKLREELREELTQLFAQGDATVIYATTEPAEALLLGGHTAVLDAGELLQYGPTPEVFHYPASLRVARAFSDPPMNL
LEGVLGHGRVVLAGNISIPMPDVAHADGPVTVGVRAGALRLDAVPQAVAVPGRVALAELSGSDTFVHVDTPAGNLVAQLT
GVRDLELGAQLSLHIEPAQIYLFNADGDRIHAPRRPGMSPASAGPVAAITESGA
>Mature_374_residues
MQLSLEGIAQHVGSQAYLYSMSLAPVPGAVTILLGTTQAGKTSLMRVMAGLDKPTAGRVLVDGADVTGVPVRERNVSMVY
QQFINYPSLRVFDNIASPLRLRRDRQADVDARVRSLAGRLHIEHLLDRYPSELSGGQQQRVALARALAKNAPLMLLDEPL
VNLDYKLREELREELTQLFAQGDATVIYATTEPAEALLLGGHTAVLDAGELLQYGPTPEVFHYPASLRVARAFSDPPMNL
LEGVLGHGRVVLAGNISIPMPDVAHADGPVTVGVRAGALRLDAVPQAVAVPGRVALAELSGSDTFVHVDTPAGNLVAQLT
GVRDLELGAQLSLHIEPAQIYLFNADGDRIHAPRRPGMSPASAGPVAAITESGA

Specific function: This Is One Of The Five Proteins Essential To The Active Binding Protein-Dependent Transport System For Maltose And Maltodextrin. Malk Is The Target For Inducer Exclusion, Mediated By The Unphosphorylated Enzyme III Of The Phosphotransferase System For G

COG id: COG3839

COG function: function code G; ABC-type sugar transport systems, ATPase components

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI105990541, Length=190, Percent_Identity=29.4736842105263, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI116734710, Length=201, Percent_Identity=28.3582089552239, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI21536376, Length=207, Percent_Identity=28.0193236714976, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI27436953, Length=187, Percent_Identity=25.1336898395722, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI27477115, Length=190, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI31657092, Length=214, Percent_Identity=28.5046728971963, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI171184400, Length=218, Percent_Identity=28.8990825688073, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI9955968, Length=216, Percent_Identity=30.0925925925926, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI9955966, Length=216, Percent_Identity=30.0925925925926, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI45243524, Length=216, Percent_Identity=30.0925925925926, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI42741659, Length=169, Percent_Identity=28.4023668639053, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI153792144, Length=187, Percent_Identity=24.5989304812834, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1790467, Length=371, Percent_Identity=33.1536388140162, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI87082267, Length=343, Percent_Identity=32.9446064139942, Blast_Score=177, Evalue=1e-45,
Organism=Escherichia coli, GI87081709, Length=279, Percent_Identity=33.3333333333333, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI87081791, Length=297, Percent_Identity=31.986531986532, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1788761, Length=279, Percent_Identity=35.1254480286738, Blast_Score=151, Evalue=7e-38,
Organism=Escherichia coli, GI1787370, Length=228, Percent_Identity=35.5263157894737, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1789032, Length=244, Percent_Identity=33.1967213114754, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1787029, Length=250, Percent_Identity=32, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1787712, Length=280, Percent_Identity=29.2857142857143, Blast_Score=121, Evalue=7e-29,
Organism=Escherichia coli, GI1788450, Length=229, Percent_Identity=32.3144104803493, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1789672, Length=236, Percent_Identity=30.0847457627119, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1786398, Length=223, Percent_Identity=34.5291479820628, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787089, Length=256, Percent_Identity=32.03125, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1786253, Length=215, Percent_Identity=33.0232558139535, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788225, Length=244, Percent_Identity=30.327868852459, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789873, Length=187, Percent_Identity=31.0160427807487, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87081834, Length=177, Percent_Identity=31.0734463276836, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786872, Length=238, Percent_Identity=30.2521008403361, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1787164, Length=209, Percent_Identity=30.622009569378, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790162, Length=239, Percent_Identity=28.0334728033473, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1786703, Length=181, Percent_Identity=30.939226519337, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788644, Length=247, Percent_Identity=29.5546558704453, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786563, Length=197, Percent_Identity=31.4720812182741, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1787105, Length=185, Percent_Identity=32.972972972973, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787500, Length=202, Percent_Identity=28.7128712871287, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1790739, Length=234, Percent_Identity=30.3418803418803, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1789891, Length=230, Percent_Identity=28.695652173913, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786981, Length=221, Percent_Identity=32.579185520362, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082268, Length=214, Percent_Identity=29.9065420560748, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789593, Length=231, Percent_Identity=28.1385281385281, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786698, Length=200, Percent_Identity=26.5, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787547, Length=216, Percent_Identity=27.3148148148148, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786803, Length=201, Percent_Identity=28.3582089552239, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788165, Length=226, Percent_Identity=30.5309734513274, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI145693107, Length=210, Percent_Identity=29.5238095238095, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081782, Length=197, Percent_Identity=33.502538071066, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787758, Length=197, Percent_Identity=27.4111675126904, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI48994943, Length=244, Percent_Identity=27.4590163934426, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788210, Length=211, Percent_Identity=27.4881516587678, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789586, Length=230, Percent_Identity=28.695652173913, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790525, Length=230, Percent_Identity=25.2173913043478, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789864, Length=244, Percent_Identity=22.5409836065574, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1789962, Length=213, Percent_Identity=24.4131455399061, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1788506, Length=220, Percent_Identity=28.1818181818182, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790544, Length=180, Percent_Identity=28.8888888888889, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790190, Length=218, Percent_Identity=25.6880733944954, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788053, Length=179, Percent_Identity=28.4916201117318, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1789963, Length=248, Percent_Identity=25.8064516129032, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790534, Length=180, Percent_Identity=29.4444444444444, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI48994883, Length=207, Percent_Identity=25.1207729468599, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=196, Percent_Identity=27.0408163265306, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71983510, Length=196, Percent_Identity=27.0408163265306, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115533592, Length=182, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71983523, Length=196, Percent_Identity=27.0408163265306, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17565586, Length=200, Percent_Identity=27.5, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193208177, Length=225, Percent_Identity=25.7777777777778, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI193202349, Length=184, Percent_Identity=31.5217391304348, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71984940, Length=183, Percent_Identity=28.4153005464481, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=202, Percent_Identity=23.2673267326733, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=213, Percent_Identity=23.4741784037559, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=228, Percent_Identity=23.2456140350877, Blast_Score=70, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6322177, Length=283, Percent_Identity=25.0883392226148, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323959, Length=217, Percent_Identity=24.8847926267281, Blast_Score=64, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24666092, Length=217, Percent_Identity=27.1889400921659, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24643674, Length=210, Percent_Identity=24.7619047619048, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI221500365, Length=393, Percent_Identity=26.4631043256997, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI116007184, Length=393, Percent_Identity=26.4631043256997, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221512771, Length=213, Percent_Identity=29.1079812206573, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24648314, Length=187, Percent_Identity=26.7379679144385, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI23397593, Length=222, Percent_Identity=31.981981981982, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574150, Length=199, Percent_Identity=28.1407035175879, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI116007328, Length=199, Percent_Identity=28.1407035175879, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR008995
- InterPro:   IPR012340
- InterPro:   IPR013611 [H]

Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]

EC number: NA

Molecular weight: Translated: 39773; Mature: 39773

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSLEGIAQHVGSQAYLYSMSLAPVPGAVTILLGTTQAGKTSLMRVMAGLDKPTAGRVL
CCCCHHHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEE
VDGADVTGVPVRERNVSMVYQQFINYPSLRVFDNIASPLRLRRDRQADVDARVRSLAGRL
EECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
HIEHLLDRYPSELSGGQQQRVALARALAKNAPLMLLDEPLVNLDYKLREELREELTQLFA
HHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH
QGDATVIYATTEPAEALLLGGHTAVLDAGELLQYGPTPEVFHYPASLRVARAFSDPPMNL
CCCCEEEEEECCCCCEEEECCCHHEECCHHHHHCCCCCCEEECCCHHEEEECCCCCCHHH
LEGVLGHGRVVLAGNISIPMPDVAHADGPVTVGVRAGALRLDAVPQAVAVPGRVALAELS
HHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCHHHCCCCCEEEEEEC
GSDTFVHVDTPAGNLVAQLTGVRDLELGAQLSLHIEPAQIYLFNADGDRIHAPRRPGMSP
CCCEEEEEECCCCCHHHHHCCCEEECCCCEEEEEEEEEEEEEECCCCCEEECCCCCCCCC
ASAGPVAAITESGA
CCCCCEEEEECCCC
>Mature Secondary Structure
MQLSLEGIAQHVGSQAYLYSMSLAPVPGAVTILLGTTQAGKTSLMRVMAGLDKPTAGRVL
CCCCHHHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEE
VDGADVTGVPVRERNVSMVYQQFINYPSLRVFDNIASPLRLRRDRQADVDARVRSLAGRL
EECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
HIEHLLDRYPSELSGGQQQRVALARALAKNAPLMLLDEPLVNLDYKLREELREELTQLFA
HHHHHHHHCCHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH
QGDATVIYATTEPAEALLLGGHTAVLDAGELLQYGPTPEVFHYPASLRVARAFSDPPMNL
CCCCEEEEEECCCCCEEEECCCHHEECCHHHHHCCCCCCEEECCCHHEEEECCCCCCHHH
LEGVLGHGRVVLAGNISIPMPDVAHADGPVTVGVRAGALRLDAVPQAVAVPGRVALAELS
HHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCHHHCCCCCEEEEEEC
GSDTFVHVDTPAGNLVAQLTGVRDLELGAQLSLHIEPAQIYLFNADGDRIHAPRRPGMSP
CCCEEEEEECCCCCHHHHHCCCEEECCCCEEEEEEEEEEEEEECCCCCEEECCCCCCCCC
ASAGPVAAITESGA
CCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; maltose [Periplasm]; H2O [C]

Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]