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The map label for this gene is yddQ [H]

Identifier: 94311163

GI number: 94311163

Start: 2439108

End: 2439716

Strand: Reverse

Name: yddQ [H]

Synonym: Rmet_2225

Alternate gene names: 94311163

Gene position: 2439716-2439108 (Counterclockwise)

Preceding gene: 94311166

Following gene: 94311162

Centisome position: 62.11

GC content: 66.5

Gene sequence:

>609_bases
ATGTCAGTCGCCCCCGTTCCAACAACGCTTCTCGACGCTGCAGGCGCGAGCCGCCAGCCATCCGCCTGGTCGGATGCCGT
TCTGGTGCTGGTGGATCACCAGCGCGAGTATGTCGACGGCAAGCTGCCGCTGACCGGTATGCCCGAGGCGGTGGCAAGCT
GCGGAGAGCTTCTGGCGCTGGCGCGCCGGTACGGCTCGCCGGTGATTCACGTCGTGCACCACGGGAAGGCGGGCGGGGCG
TTCGATCCGGCTGGACCTCATGCGGCGATCATCGAAGGTCTGACCCCCGTCGATGGCGAGCAGTCCGTGGTCAAGCATCT
GCCGAACAGCTTCGCCGGCACCGACCTGGCCGATCTCCTGGTAGCCACGGGCAAGAAGGAGCTGATCGTGGCGGGCTTCC
AGACCCATATGTGCATCAGCGCGACCGTCCGGTCCGCGCTCGACCACGGCTACCGCGTGACGCTGGTGGCCGCTGCCTGC
GCCACGCGTGATTTGCCCGATCCACTGGGAGGTGCGCCGTTGTCCGCAGCGGTACTTCATCGCGTTACCCTGGCAGCCTT
GAATGACCGGTTCGCCACCGTTGTGGCCGATGCATCGGTTTGGCACTAG

Upstream 100 bases:

>100_bases
TGTGCTTTTTTGCACAGTGATTGTGAATGAGTGGCGAATTGGCGCACAGCTTAGCCTGTCCTACGATGCCTGCATAGTCA
CCTGGCCATGGAGATGTGAG

Downstream 100 bases:

>100_bases
CGGCAGGAATCGGCAGGAATCGGAAATCGGGAGGAATCGGGAGGAATCGGGAGGAATGCGCGCCGGTCAAGTGCCGGCGT
TGGGTTTGAGGGGGTGAACA

Product: isochorismatase family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSVAPVPTTLLDAAGASRQPSAWSDAVLVLVDHQREYVDGKLPLTGMPEAVASCGELLALARRYGSPVIHVVHHGKAGGA
FDPAGPHAAIIEGLTPVDGEQSVVKHLPNSFAGTDLADLLVATGKKELIVAGFQTHMCISATVRSALDHGYRVTLVAAAC
ATRDLPDPLGGAPLSAAVLHRVTLAALNDRFATVVADASVWH

Sequences:

>Translated_202_residues
MSVAPVPTTLLDAAGASRQPSAWSDAVLVLVDHQREYVDGKLPLTGMPEAVASCGELLALARRYGSPVIHVVHHGKAGGA
FDPAGPHAAIIEGLTPVDGEQSVVKHLPNSFAGTDLADLLVATGKKELIVAGFQTHMCISATVRSALDHGYRVTLVAAAC
ATRDLPDPLGGAPLSAAVLHRVTLAALNDRFATVVADASVWH
>Mature_201_residues
SVAPVPTTLLDAAGASRQPSAWSDAVLVLVDHQREYVDGKLPLTGMPEAVASCGELLALARRYGSPVIHVVHHGKAGGAF
DPAGPHAAIIEGLTPVDGEQSVVKHLPNSFAGTDLADLLVATGKKELIVAGFQTHMCISATVRSALDHGYRVTLVAAACA
TRDLPDPLGGAPLSAAVLHRVTLAALNDRFATVVADASVWH

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 20886; Mature: 20755

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAPVPTTLLDAAGASRQPSAWSDAVLVLVDHQREYVDGKLPLTGMPEAVASCGELLAL
CCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHH
ARRYGSPVIHVVHHGKAGGAFDPAGPHAAIIEGLTPVDGEQSVVKHLPNSFAGTDLADLL
HHHHCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHH
VATGKKELIVAGFQTHMCISATVRSALDHGYRVTLVAAACATRDLPDPLGGAPLSAAVLH
HHCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCCCCCCCCHHHHHHH
RVTLAALNDRFATVVADASVWH
HHHHHHHCCHHHEEEECCCCCC
>Mature Secondary Structure 
SVAPVPTTLLDAAGASRQPSAWSDAVLVLVDHQREYVDGKLPLTGMPEAVASCGELLAL
CCCCCCHHHHHHCCCCCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHH
ARRYGSPVIHVVHHGKAGGAFDPAGPHAAIIEGLTPVDGEQSVVKHLPNSFAGTDLADLL
HHHHCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHHH
VATGKKELIVAGFQTHMCISATVRSALDHGYRVTLVAAACATRDLPDPLGGAPLSAAVLH
HHCCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCCCCCCCCHHHHHHH
RVTLAALNDRFATVVADASVWH
HHHHHHHCCHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]