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The map label for this gene is yejB [H]

Identifier: 94311083

GI number: 94311083

Start: 2337031

End: 2338080

Strand: Reverse

Name: yejB [H]

Synonym: Rmet_2145

Alternate gene names: 94311083

Gene position: 2338080-2337031 (Counterclockwise)

Preceding gene: 94311084

Following gene: 94311082

Centisome position: 59.52

GC content: 61.14

Gene sequence:

>1050_bases
ATGCTTGCCTATCTGTTGAAGCGCATTCTGCTGATGATTCCGACGTTGATCGGCGTCATTACGCTTACGTTCGTCGTGAT
CCAGTTCGTGCCCGGTGGCCCAGTCGAGCAGATGATGCTTGAGATGAAAGGGCGGGGCGGTGCTGCCGAGGCCAGCGGCG
GCGGTGCCGAGTATCGCGGCCGTCGCGGCGTGGACCCGGACAAGATCAAGGAGATCCAGGCGCTGTACGGTTTCGACAAG
CCGCCGATCGAGCGCTATTTCCTGATGCTCAAGCGCTTTGCAAAGTTCGACCTCGGCCAGAGCTACTTCCAGCACCGCAG
CGTCTGGGAACTGGTGAAGTCGAAGATGCCTGTGTCGATCAGCCTGGGGCTCTGGACATTCTTCCTGACCTATCTGATAT
CGGTGCCGCTGGGCATCTCCAAGGCAATCCGGGCCGGCAGCCGCTTCGACGTGATCAGCAGCATGATCGTGCTGGTGGGG
TATGCGATCCCCGGCTTCGTGCTCGGCGTGCTGCTGCTGGTGCTGTTTGGCGGCGGCACGTTCGTGCAGTGGTTCCCGCT
GCGCGGCCTGACCTCCGATGACTGGGACCAGTTGTCGCTCATGGGCAAGGTGATGGATTACCTCTGGCACCTGGTGCTGC
CGATCACGGCATCGGTCGTGGGCAGCTTCGCCGTGGTCACCATGCTGACCAAGAATGCGTTCCTGGAGGAAATCCGCAAG
CAGTACGTGCTGACCGCGCGGGCCAAGGGCCTGTCCGAGCACCGCGTGCTCTGGAAGCATGTGTTCCGTAACGCGCTGAT
TCCGCTCGTGACGGGGTTCCCGGCGGCGTTTATCGGCGCGTTCTTCACCGGCTCGCTGCTGATCGAAACACTGTTTTCGC
TCGACGGGCTGGGTCTGCTGTCCTATGAGGCGGTGCTGCGTCGTGACTACCCCGTGGTGCTCGGCACGCTGTACCTGTTC
ACGCTGATCGGTCTGGTGACGCGCCTGATTTCGGACATTTGCTACGTGATGGTCGATCCTCGTATTCACTTCGAGGGGAT
GCATCGATGA

Upstream 100 bases:

>100_bases
GCGTCTGCCGTACTTCTACACGGCGGAAGGCTGGATCCTCTCCAACTGGTGGCGCAATGACCTGGTGCCAAAGACCCAGT
AATCCCGAACCCGGACGGCC

Downstream 100 bases:

>100_bases
ATCCCTTCAAACGCGCCCCAATCCAGAACGGGCTGCCGCACTCGCTGTCTCCGCGTCAGCGCGCCTGGCAACGGTTCCGT
CGCAACCGGCTTGGCTACTG

Product: ABC superfamily transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MLAYLLKRILLMIPTLIGVITLTFVVIQFVPGGPVEQMMLEMKGRGGAAEASGGGAEYRGRRGVDPDKIKEIQALYGFDK
PPIERYFLMLKRFAKFDLGQSYFQHRSVWELVKSKMPVSISLGLWTFFLTYLISVPLGISKAIRAGSRFDVISSMIVLVG
YAIPGFVLGVLLLVLFGGGTFVQWFPLRGLTSDDWDQLSLMGKVMDYLWHLVLPITASVVGSFAVVTMLTKNAFLEEIRK
QYVLTARAKGLSEHRVLWKHVFRNALIPLVTGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYEAVLRRDYPVVLGTLYLF
TLIGLVTRLISDICYVMVDPRIHFEGMHR

Sequences:

>Translated_349_residues
MLAYLLKRILLMIPTLIGVITLTFVVIQFVPGGPVEQMMLEMKGRGGAAEASGGGAEYRGRRGVDPDKIKEIQALYGFDK
PPIERYFLMLKRFAKFDLGQSYFQHRSVWELVKSKMPVSISLGLWTFFLTYLISVPLGISKAIRAGSRFDVISSMIVLVG
YAIPGFVLGVLLLVLFGGGTFVQWFPLRGLTSDDWDQLSLMGKVMDYLWHLVLPITASVVGSFAVVTMLTKNAFLEEIRK
QYVLTARAKGLSEHRVLWKHVFRNALIPLVTGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYEAVLRRDYPVVLGTLYLF
TLIGLVTRLISDICYVMVDPRIHFEGMHR
>Mature_349_residues
MLAYLLKRILLMIPTLIGVITLTFVVIQFVPGGPVEQMMLEMKGRGGAAEASGGGAEYRGRRGVDPDKIKEIQALYGFDK
PPIERYFLMLKRFAKFDLGQSYFQHRSVWELVKSKMPVSISLGLWTFFLTYLISVPLGISKAIRAGSRFDVISSMIVLVG
YAIPGFVLGVLLLVLFGGGTFVQWFPLRGLTSDDWDQLSLMGKVMDYLWHLVLPITASVVGSFAVVTMLTKNAFLEEIRK
QYVLTARAKGLSEHRVLWKHVFRNALIPLVTGFPAAFIGAFFTGSLLIETLFSLDGLGLLSYEAVLRRDYPVVLGTLYLF
TLIGLVTRLISDICYVMVDPRIHFEGMHR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=363, Percent_Identity=54.8209366391185, Blast_Score=409, Evalue=1e-115,
Organism=Escherichia coli, GI1789965, Length=365, Percent_Identity=32.0547945205479, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1787497, Length=345, Percent_Identity=30.1449275362319, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787053, Length=345, Percent_Identity=28.695652173913, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1789888, Length=349, Percent_Identity=26.3610315186246, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1787761, Length=353, Percent_Identity=26.628895184136, Blast_Score=95, Evalue=7e-21,
Organism=Escherichia coli, GI1787550, Length=271, Percent_Identity=25.830258302583, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 39045; Mature: 39045

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAYLLKRILLMIPTLIGVITLTFVVIQFVPGGPVEQMMLEMKGRGGAAEASGGGAEYRG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
RRGVDPDKIKEIQALYGFDKPPIERYFLMLKRFAKFDLGQSYFQHRSVWELVKSKMPVSI
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
SLGLWTFFLTYLISVPLGISKAIRAGSRFDVISSMIVLVGYAIPGFVLGVLLLVLFGGGT
EHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FVQWFPLRGLTSDDWDQLSLMGKVMDYLWHLVLPITASVVGSFAVVTMLTKNAFLEEIRK
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYVLTARAKGLSEHRVLWKHVFRNALIPLVTGFPAAFIGAFFTGSLLIETLFSLDGLGLL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
SYEAVLRRDYPVVLGTLYLFTLIGLVTRLISDICYVMVDPRIHFEGMHR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLAYLLKRILLMIPTLIGVITLTFVVIQFVPGGPVEQMMLEMKGRGGAAEASGGGAEYRG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
RRGVDPDKIKEIQALYGFDKPPIERYFLMLKRFAKFDLGQSYFQHRSVWELVKSKMPVSI
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
SLGLWTFFLTYLISVPLGISKAIRAGSRFDVISSMIVLVGYAIPGFVLGVLLLVLFGGGT
EHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FVQWFPLRGLTSDDWDQLSLMGKVMDYLWHLVLPITASVVGSFAVVTMLTKNAFLEEIRK
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QYVLTARAKGLSEHRVLWKHVFRNALIPLVTGFPAAFIGAFFTGSLLIETLFSLDGLGLL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHH
SYEAVLRRDYPVVLGTLYLFTLIGLVTRLISDICYVMVDPRIHFEGMHR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]