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The map label for this gene is rimP [H]

Identifier: 94310971

GI number: 94310971

Start: 2201176

End: 2201664

Strand: Reverse

Name: rimP [H]

Synonym: Rmet_2033

Alternate gene names: 94310971

Gene position: 2201664-2201176 (Counterclockwise)

Preceding gene: 94310972

Following gene: 94310970

Centisome position: 56.05

GC content: 57.06

Gene sequence:

>489_bases
GTGCATCTGGCAGATTTGATCGAAACCACCCTTATCGGCATGGGCTACGAGTTGGTTGAGCTTGAGCGTGCCCCGGCCGG
ACTTCTGCGTGTCTATATCGATCAGCCTGAAACTGGCATCGTCATTGAGGATTGCGAGAAGGTCAGTCGCCAGCTCACTC
ACGTGCTCACTGTGGAGAACGTTGATTACGAGCGCCTCGAAGTGTCGTCGCCAGGCCTGGACCGGCCGCTGAAGAAGTTG
GCCGATTTCGTTCGCTTTGCCGGTGCTGAGGTCAGGGTTACGCTGCGCCTGCCGGTCAATGGCCAGAAGAATTTCGTGGG
CATCCTGTGTGAACCCGCAGGAGATGCCGGGGCCGAGAAGATCGGCCTGGAGTTCGAAGGCAAGGACGGTCCGGCACTGC
TGGAATTCGCCATATCCGATGTCGATCGCGCACGTTTGGTGCCGGTGATCGACTTCAAGGGAAATCAAAGAAAAGGGAAC
AAGCAATGA

Upstream 100 bases:

>100_bases
GCAGGCAGGACGGTTTGCAGGTCGCGTCGAGCATCAATTCCGAGCGTATTGCGTTGTCCGGTGTCTGCCACGGTATTGAA
GGCCACTACTCGGGATTACA

Downstream 100 bases:

>100_bases
GCCGCGAAGTTCTGTTGCTCGTCGATGCGCTAGCGCGCGAAAAGAACGTCGACAAGGATGTGGTTTTCGGTGCGCTGGAG
GCGGCTCTCGCCTCGGCCAC

Product: ribosome maturation protein RimP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MHLADLIETTLIGMGYELVELERAPAGLLRVYIDQPETGIVIEDCEKVSRQLTHVLTVENVDYERLEVSSPGLDRPLKKL
ADFVRFAGAEVRVTLRLPVNGQKNFVGILCEPAGDAGAEKIGLEFEGKDGPALLEFAISDVDRARLVPVIDFKGNQRKGN
KQ

Sequences:

>Translated_162_residues
MHLADLIETTLIGMGYELVELERAPAGLLRVYIDQPETGIVIEDCEKVSRQLTHVLTVENVDYERLEVSSPGLDRPLKKL
ADFVRFAGAEVRVTLRLPVNGQKNFVGILCEPAGDAGAEKIGLEFEGKDGPALLEFAISDVDRARLVPVIDFKGNQRKGN
KQ
>Mature_162_residues
MHLADLIETTLIGMGYELVELERAPAGLLRVYIDQPETGIVIEDCEKVSRQLTHVLTVENVDYERLEVSSPGLDRPLKKL
ADFVRFAGAEVRVTLRLPVNGQKNFVGILCEPAGDAGAEKIGLEFEGKDGPALLEFAISDVDRARLVPVIDFKGNQRKGN
KQ

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=41.0596026490066, Blast_Score=93, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 17857; Mature: 17857

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLADLIETTLIGMGYELVELERAPAGLLRVYIDQPETGIVIEDCEKVSRQLTHVLTVEN
CCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHEEEECC
VDYERLEVSSPGLDRPLKKLADFVRFAGAEVRVTLRLPVNGQKNFVGILCEPAGDAGAEK
CCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEE
IGLEFEGKDGPALLEFAISDVDRARLVPVIDFKGNQRKGNKQ
ECEEEECCCCCCEEHHHHHCCCCHHEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MHLADLIETTLIGMGYELVELERAPAGLLRVYIDQPETGIVIEDCEKVSRQLTHVLTVEN
CCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHEEEECC
VDYERLEVSSPGLDRPLKKLADFVRFAGAEVRVTLRLPVNGQKNFVGILCEPAGDAGAEK
CCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEE
IGLEFEGKDGPALLEFAISDVDRARLVPVIDFKGNQRKGNKQ
ECEEEECCCCCCEEHHHHHCCCCHHEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA