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The map label for this gene is dnaB [H]

Identifier: 94310913

GI number: 94310913

Start: 2150962

End: 2152353

Strand: Reverse

Name: dnaB [H]

Synonym: Rmet_1975

Alternate gene names: 94310913

Gene position: 2152353-2150962 (Counterclockwise)

Preceding gene: 94310914

Following gene: 94310912

Centisome position: 54.79

GC content: 60.56

Gene sequence:

>1392_bases
ATGAACGCGCCCGCCGCAGATCCCCAACTAGACAGTCTCAAGGTTCCACCGCATTCCATCGAGGCCGAGCAATCGGTACT
TGGCGGGTTGCTGCTGGATAACGCCGCCTGGGACCGGATTGCCGACTTCATTTCTGAGGCGGATTTCTATCGTTTCGACC
ATCGGCTGATCTTTCAGAGCATTGCCCGTCTGATTTCGGCGACCAAGCCGGCCGACGTGATCACTGTCTTCGAGATGCTC
CAGGGAGCTGGCAAGGCCGAGGAGGTCGGAGGGCTGGCCTACCTGAACTCGCTGGCCCAAAACACGCCGAGTGCGGCCAA
TATCCGTCGTTACGCGGAAATCGTGCGCGAACGTGCGGTGCTGCGCAAGCTCGTGACCGTCGCCGATGACATTGCGTCGG
CGGCCTTCGCGCCCAAGGGGCGTGAGGTGCGCGAGCTGCTCGACGAAGCCGAGTCGAAAGTATTCGCCATTGCCGAAGAG
GGCGCGCGTGGCCAGAAGGGCTTCCAGGAAATCCAGCCGCTGCTGACGCAGGTGGTCGAGCGGATCGACGAGCTTTACCA
CCGTGACTCCACCACCGATGTGACCGGCGTACCCACCGGTTTCATCGACCTCGACCGCATGACCAGTGGTATGCAGGCGG
GGGATCTCATCATCGTGGCAGGGCGCCCCTCGATGGGTAAGACGGCATTCTCACTGAACATTGGCGAACACGTGGCTGTC
GAGCAGGGGCTGCCTGTAGCGGTCTTCTCGATGGAAATGGCGGGCGTCCAGCTGGCCATGCGTATGCTGGGTTCGGTGGG
GCGCCTCGATCAGCATCGCCTGCGTACCGGTCGACTGCTCGACGAGGACTGGCCGCGCTTGACGCACTCGATTCAGCGCA
TGAACGACGCGCAGTTGTTCATCGATGAGACGCCGGCGTTGAATCCCATGGAGTTGCGTGCCCGTTCCCGCCGTCTGGCG
CGGCAATGTGGGCAGCTTGGCCTGATCATCATCGATTACCTCCAACTGATGTCGGGTTCGGGTAGCGGCGAGAACCGTGC
CACCGAGATCTCGGAAATCTCGCGTTCGCTGAAGGGGTTGGCCAAGGAGCTCAACTGCCCGGTCATTGCCTTGTCGCAGC
TGAACCGCAGTCTGGAACAGCGCCCGAACAAGCGCCCCGTGATGTCCGACTTGCGAGAGTCGGGCGCTATCGAACAGGAT
GCCGACGTGATTCTGTTCATCTATCGCGACGAAGTTTACAACCCGGATTCGCAAGACAAGGGCACGGCCGAGATCATCAT
CGGCAAGCAGCGTAACGGTCCAATCGGTACCGTTAGGCTCACGTTCCTAGGTCAATTCACGAAATTTGACAATTTTAGCG
GTGGTCCGGCGTTCTTCGACAACGACACCTGA

Upstream 100 bases:

>100_bases
GCGCCAGTTCGGTTTGGCGTACGCGATGCACAGAAAGGCAGGAGCCGCGCTCCTGCCTTTTTTGTTTGCGCGGCCTTCAG
CGCCGCTATAATTGCCCCCC

Downstream 100 bases:

>100_bases
TTCGCCGTGATTACCCCGCAGGGCGACGCATACCTGTAAAATATTGCGCTTTGATGACAGCCGCCCTCGCGCGGCTGTCA
TGCAATTTGCCCTGCATCCC

Product: replicative DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNAPAADPQLDSLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFISEADFYRFDHRLIFQSIARLISATKPADVITVFEML
QGAGKAEEVGGLAYLNSLAQNTPSAANIRRYAEIVRERAVLRKLVTVADDIASAAFAPKGREVRELLDEAESKVFAIAEE
GARGQKGFQEIQPLLTQVVERIDELYHRDSTTDVTGVPTGFIDLDRMTSGMQAGDLIIVAGRPSMGKTAFSLNIGEHVAV
EQGLPVAVFSMEMAGVQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHSIQRMNDAQLFIDETPALNPMELRARSRRLA
RQCGQLGLIIIDYLQLMSGSGSGENRATEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQD
ADVILFIYRDEVYNPDSQDKGTAEIIIGKQRNGPIGTVRLTFLGQFTKFDNFSGGPAFFDNDT

Sequences:

>Translated_463_residues
MNAPAADPQLDSLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFISEADFYRFDHRLIFQSIARLISATKPADVITVFEML
QGAGKAEEVGGLAYLNSLAQNTPSAANIRRYAEIVRERAVLRKLVTVADDIASAAFAPKGREVRELLDEAESKVFAIAEE
GARGQKGFQEIQPLLTQVVERIDELYHRDSTTDVTGVPTGFIDLDRMTSGMQAGDLIIVAGRPSMGKTAFSLNIGEHVAV
EQGLPVAVFSMEMAGVQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHSIQRMNDAQLFIDETPALNPMELRARSRRLA
RQCGQLGLIIIDYLQLMSGSGSGENRATEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQD
ADVILFIYRDEVYNPDSQDKGTAEIIIGKQRNGPIGTVRLTFLGQFTKFDNFSGGPAFFDNDT
>Mature_463_residues
MNAPAADPQLDSLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFISEADFYRFDHRLIFQSIARLISATKPADVITVFEML
QGAGKAEEVGGLAYLNSLAQNTPSAANIRRYAEIVRERAVLRKLVTVADDIASAAFAPKGREVRELLDEAESKVFAIAEE
GARGQKGFQEIQPLLTQVVERIDELYHRDSTTDVTGVPTGFIDLDRMTSGMQAGDLIIVAGRPSMGKTAFSLNIGEHVAV
EQGLPVAVFSMEMAGVQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHSIQRMNDAQLFIDETPALNPMELRARSRRLA
RQCGQLGLIIIDYLQLMSGSGSGENRATEISEISRSLKGLAKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQD
ADVILFIYRDEVYNPDSQDKGTAEIIIGKQRNGPIGTVRLTFLGQFTKFDNFSGGPAFFDNDT

Specific function: Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with dnaC protein, primase, and other prepriming proteins [

COG id: COG0305

COG function: function code L; Replicative DNA helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SF4 helicase domain [H]

Homologues:

Organism=Escherichia coli, GI1790486, Length=455, Percent_Identity=56.9230769230769, Blast_Score=510, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR007692
- InterPro:   IPR007694
- InterPro:   IPR007693
- InterPro:   IPR016136 [H]

Pfam domain/function: PF00772 DnaB; PF03796 DnaB_C [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 50983; Mature: 50983

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPAADPQLDSLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFISEADFYRFDHRLIFQS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IARLISATKPADVITVFEMLQGAGKAEEVGGLAYLNSLAQNTPSAANIRRYAEIVRERAV
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LRKLVTVADDIASAAFAPKGREVRELLDEAESKVFAIAEEGARGQKGFQEIQPLLTQVVE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH
RIDELYHRDSTTDVTGVPTGFIDLDRMTSGMQAGDLIIVAGRPSMGKTAFSLNIGEHVAV
HHHHHHHCCCCCCCCCCCCCCEEHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHH
EQGLPVAVFSMEMAGVQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHSIQRMNDAQLF
HCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE
IDETPALNPMELRARSRRLARQCGQLGLIIIDYLQLMSGSGSGENRATEISEISRSLKGL
EECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
AKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSQDK
HHHCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCC
GTAEIIIGKQRNGPIGTVRLTFLGQFTKFDNFSGGPAFFDNDT
CCEEEEEECCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAPAADPQLDSLKVPPHSIEAEQSVLGGLLLDNAAWDRIADFISEADFYRFDHRLIFQS
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IARLISATKPADVITVFEMLQGAGKAEEVGGLAYLNSLAQNTPSAANIRRYAEIVRERAV
HHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LRKLVTVADDIASAAFAPKGREVRELLDEAESKVFAIAEEGARGQKGFQEIQPLLTQVVE
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH
RIDELYHRDSTTDVTGVPTGFIDLDRMTSGMQAGDLIIVAGRPSMGKTAFSLNIGEHVAV
HHHHHHHCCCCCCCCCCCCCCEEHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHH
EQGLPVAVFSMEMAGVQLAMRMLGSVGRLDQHRLRTGRLLDEDWPRLTHSIQRMNDAQLF
HCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEE
IDETPALNPMELRARSRRLARQCGQLGLIIIDYLQLMSGSGSGENRATEISEISRSLKGL
EECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
AKELNCPVIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDADVILFIYRDEVYNPDSQDK
HHHCCCCEEEHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCC
GTAEIIIGKQRNGPIGTVRLTFLGQFTKFDNFSGGPAFFDNDT
CCEEEEEECCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]