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The map label for this gene is ycaC [H]

Identifier: 94310852

GI number: 94310852

Start: 2083058

End: 2083756

Strand: Direct

Name: ycaC [H]

Synonym: Rmet_1914

Alternate gene names: 94310852

Gene position: 2083058-2083756 (Clockwise)

Preceding gene: 94310842

Following gene: 94310854

Centisome position: 53.03

GC content: 61.8

Gene sequence:

>699_bases
ATGTCGAACGCCAAACTGGAAGTCCTGACCCCGCGCAACAGCCAGCTGATCATCATTGACCACCAGCCGCAAATGGCCTT
CGGCGTCCAGTCGATGGACCGTCAGACCATGAAGAACAACGTTGTGGGCCTGGCCAAGGCTGCGAAGGTCTTCGACGTGC
CGACCACCATCACCACCGTCGAAAGCGAGTCGTTCTCGGGCTACACCTACCCGGAACTGCTCGACGTGTTCCCCGGCAAG
CAAACCCTGGAACGCTCCTCGATGAACTCCTGGGACGACCAGAAAGTACGCGACGCGCTGGCCGCCAATGGCCGCAAGAA
GGTAATCGTGGCCGGCCTGTGGACCGAGGTCTGCAACACCACTTTCGCGCTCTCCGCCATGCTTGAAGGCGACTACGAAA
TCTACATGGTGGCCGACGCCTCGGGCGGCACCACCAAGGAAGCGCATGACTACGCCATGCAGCGCATGATCCAGGCCGGC
GTGGTACCGGTGACGTGGCAACAGGTTCTGCTGGAATGGCAACGCGACTGGAAGAACCGCGAAACGTACGACGCGGTGAT
GGCCGTGGCCAAGGAACACTCAGGCGCCTACGGCATGGGCATCGACTACGCCTACACGATGGTTCACAAGGCCGCGCAAC
GCACGGCAACCCCACACGCATCGATCGCGCCCGTACACGCACCGGTGATCGAGCGCTGA

Upstream 100 bases:

>100_bases
ATAGTTCTGCACATGGACAGCGCAACAACGCAACGAACTGAAAGCGGCGCTGCCAGACCAAGAACTCAAATTCCTTGAAT
AAAACTTAGTGGAGAGCACC

Downstream 100 bases:

>100_bases
AGCATGCCCGCAGCCAGTCATCCCACGGAGCACACAAGATGAAATCAGATCGAAGCGTGGTCAACGGCGCCCTCCTGCTG
GGATGCTGGCTGGCGGTCAG

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSNAKLEVLTPRNSQLIIIDHQPQMAFGVQSMDRQTMKNNVVGLAKAAKVFDVPTTITTVESESFSGYTYPELLDVFPGK
QTLERSSMNSWDDQKVRDALAANGRKKVIVAGLWTEVCNTTFALSAMLEGDYEIYMVADASGGTTKEAHDYAMQRMIQAG
VVPVTWQQVLLEWQRDWKNRETYDAVMAVAKEHSGAYGMGIDYAYTMVHKAAQRTATPHASIAPVHAPVIER

Sequences:

>Translated_232_residues
MSNAKLEVLTPRNSQLIIIDHQPQMAFGVQSMDRQTMKNNVVGLAKAAKVFDVPTTITTVESESFSGYTYPELLDVFPGK
QTLERSSMNSWDDQKVRDALAANGRKKVIVAGLWTEVCNTTFALSAMLEGDYEIYMVADASGGTTKEAHDYAMQRMIQAG
VVPVTWQQVLLEWQRDWKNRETYDAVMAVAKEHSGAYGMGIDYAYTMVHKAAQRTATPHASIAPVHAPVIER
>Mature_231_residues
SNAKLEVLTPRNSQLIIIDHQPQMAFGVQSMDRQTMKNNVVGLAKAAKVFDVPTTITTVESESFSGYTYPELLDVFPGKQ
TLERSSMNSWDDQKVRDALAANGRKKVIVAGLWTEVCNTTFALSAMLEGDYEIYMVADASGGTTKEAHDYAMQRMIQAGV
VPVTWQQVLLEWQRDWKNRETYDAVMAVAKEHSGAYGMGIDYAYTMVHKAAQRTATPHASIAPVHAPVIER

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787124, Length=172, Percent_Identity=36.046511627907, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 25778; Mature: 25646

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAKLEVLTPRNSQLIIIDHQPQMAFGVQSMDRQTMKNNVVGLAKAAKVFDVPTTITTV
CCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHEECCCEEEEE
ESESFSGYTYPELLDVFPGKQTLERSSMNSWDDQKVRDALAANGRKKVIVAGLWTEVCNT
CCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHH
TFALSAMLEGDYEIYMVADASGGTTKEAHDYAMQRMIQAGVVPVTWQQVLLEWQRDWKNR
HHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
ETYDAVMAVAKEHSGAYGMGIDYAYTMVHKAAQRTATPHASIAPVHAPVIER
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNAKLEVLTPRNSQLIIIDHQPQMAFGVQSMDRQTMKNNVVGLAKAAKVFDVPTTITTV
CCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHEECCCEEEEE
ESESFSGYTYPELLDVFPGKQTLERSSMNSWDDQKVRDALAANGRKKVIVAGLWTEVCNT
CCCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHH
TFALSAMLEGDYEIYMVADASGGTTKEAHDYAMQRMIQAGVVPVTWQQVLLEWQRDWKNR
HHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
ETYDAVMAVAKEHSGAYGMGIDYAYTMVHKAAQRTATPHASIAPVHAPVIER
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 9782055 [H]