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The map label for this gene is omp32 [H]

Identifier: 94310845

GI number: 94310845

Start: 2076764

End: 2077879

Strand: Reverse

Name: omp32 [H]

Synonym: Rmet_1907

Alternate gene names: 94310845

Gene position: 2077879-2076764 (Counterclockwise)

Preceding gene: 94310846

Following gene: 94310844

Centisome position: 52.9

GC content: 62.19

Gene sequence:

>1116_bases
ATGCCCCCGATACTGCACCTGCGCCGACGCCACGTCATGCCACTGGTCGTCATGGCGACCGGCTTTGTCGCCGACGCCAG
CGCGGAAACCAACGTGACGATCTATGGCCGGCTCAACACAGCCATCGAGTATTCGAGCGCCAGTACCTCGACGAATGGCA
CGTCGCTTGGCAGCGTGGTGCGCCAGACCAACAACCGTTCGGTGTTCGGCTTCCGCGGTGAGGAAGATCTGGGAGGATCG
CTGAAGGCGGTGTGGCAGATCGAAAGCAACCTGTCGATCGATACCGGGCAGGGACAGATCGCGGGACGCAATTCGCGCAT
CGGTCTGCAGGGCGACTATGGCCTGTTTTTCATGGGGCATTGGACCACGCCCTACACCGAGGCAACGATGGGTTACGACC
CGTACTACCCGACCACCGCCGGCTACATGGCGCTGATCGGCAACGGATCGACCTCGAGCTCCGACAACGTGCAGGACACC
AGTTCGTTCGACCGGCGTCAGAAGAACATCGTGCAGTACCGTTCGCCGTCACTGGCCGGCGTCAGTGTCTCGCTCGGCTG
GGGGCTGCCAGAGGAAAAGCTCACCGTGCCGCGCAATCCGGCGCTGTACTCGATGGCTGCCGTCTACGAACGTGGCCCGC
TGAACGCCACCGTCGCCTACGAAATCCACCAACACTATCAGGCCGCGGGCCGCAACGACGATGCGCTGAAATTCGGCATC
GCTTACCAGTTGTTCCAGGGGACGCGCCTTGCGGCGATCTACGAGCACCTGCACTACCGCACCGATACGGGTGACCTGCA
GCGCAACGCCTATTACGCGTCGCTGGTGCAGCAGGTAGGTACCGGCAGTGTGCGCGCTGGCGTTGCATATGCCGCGAACG
GGACAGGGTCGTCGACCAGCACGATTGGCTACTTCCGCAGTGGCGCCGAGACGGGAGCTATCCAGTTCACGGTTGGCTAC
GACTATCCGCTGTCGAAGCGCACGGCGCTGTTCGCGTACTACAGCCGCATCAACAACAAGAAGAACGCGGTCTACGACTT
CGCAATCAACCAGCTCGGCATCAAGGCTGGCGCTGACCCGCAAACAGTGGCGCTCGGCATGCGTCACTTCTTCTGA

Upstream 100 bases:

>100_bases
GACCCTTGAAGTCCTCGTCCGCCCCGGAATGCAAACGTTTGCGCTTTATGCGGCCCGAGGCGGGCATCAGAAGAACATAA
AAAAACCTGGAGACAAAAAG

Downstream 100 bases:

>100_bases
CGTTCGAATACCCGCACCCGCACACGCATCGCGAGGAGACATATCATGCTTCGACGTTTCAAGGCGCTTGGCGCCATGCT
TTCCCTTGTAATGGCATCGA

Product: outer membrane protein (porin)

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MPPILHLRRRHVMPLVVMATGFVADASAETNVTIYGRLNTAIEYSSASTSTNGTSLGSVVRQTNNRSVFGFRGEEDLGGS
LKAVWQIESNLSIDTGQGQIAGRNSRIGLQGDYGLFFMGHWTTPYTEATMGYDPYYPTTAGYMALIGNGSTSSSDNVQDT
SSFDRRQKNIVQYRSPSLAGVSVSLGWGLPEEKLTVPRNPALYSMAAVYERGPLNATVAYEIHQHYQAAGRNDDALKFGI
AYQLFQGTRLAAIYEHLHYRTDTGDLQRNAYYASLVQQVGTGSVRAGVAYAANGTGSSTSTIGYFRSGAETGAIQFTVGY
DYPLSKRTALFAYYSRINNKKNAVYDFAINQLGIKAGADPQTVALGMRHFF

Sequences:

>Translated_371_residues
MPPILHLRRRHVMPLVVMATGFVADASAETNVTIYGRLNTAIEYSSASTSTNGTSLGSVVRQTNNRSVFGFRGEEDLGGS
LKAVWQIESNLSIDTGQGQIAGRNSRIGLQGDYGLFFMGHWTTPYTEATMGYDPYYPTTAGYMALIGNGSTSSSDNVQDT
SSFDRRQKNIVQYRSPSLAGVSVSLGWGLPEEKLTVPRNPALYSMAAVYERGPLNATVAYEIHQHYQAAGRNDDALKFGI
AYQLFQGTRLAAIYEHLHYRTDTGDLQRNAYYASLVQQVGTGSVRAGVAYAANGTGSSTSTIGYFRSGAETGAIQFTVGY
DYPLSKRTALFAYYSRINNKKNAVYDFAINQLGIKAGADPQTVALGMRHFF
>Mature_370_residues
PPILHLRRRHVMPLVVMATGFVADASAETNVTIYGRLNTAIEYSSASTSTNGTSLGSVVRQTNNRSVFGFRGEEDLGGSL
KAVWQIESNLSIDTGQGQIAGRNSRIGLQGDYGLFFMGHWTTPYTEATMGYDPYYPTTAGYMALIGNGSTSSSDNVQDTS
SFDRRQKNIVQYRSPSLAGVSVSLGWGLPEEKLTVPRNPALYSMAAVYERGPLNATVAYEIHQHYQAAGRNDDALKFGIA
YQLFQGTRLAAIYEHLHYRTDTGDLQRNAYYASLVQQVGTGSVRAGVAYAANGTGSSTSTIGYFRSGAETGAIQFTVGYD
YPLSKRTALFAYYSRINNKKNAVYDFAINQLGIKAGADPQTVALGMRHFF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40412; Mature: 40280

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPILHLRRRHVMPLVVMATGFVADASAETNVTIYGRLNTAIEYSSASTSTNGTSLGSVV
CCCHHHHHHHCCCEEEEEEECEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHH
RQTNNRSVFGFRGEEDLGGSLKAVWQIESNLSIDTGQGQIAGRNSRIGLQGDYGLFFMGH
HHCCCCEEEEECCCCCCCCCEEEEEEEECCCEEECCCCEEECCCCEEEECCCCCEEEEEC
WTTPYTEATMGYDPYYPTTAGYMALIGNGSTSSSDNVQDTSSFDRRQKNIVQYRSPSLAG
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCE
VSVSLGWGLPEEKLTVPRNPALYSMAAVYERGPLNATVAYEIHQHYQAAGRNDDALKFGI
EEEEECCCCCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCCCEEEHE
AYQLFQGTRLAAIYEHLHYRTDTGDLQRNAYYASLVQQVGTGSVRAGVAYAANGTGSSTS
EEEHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCEEEEECCCCCCCC
TIGYFRSGAETGAIQFTVGYDYPLSKRTALFAYYSRINNKKNAVYDFAINQLGIKAGADP
EEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCH
QTVALGMRHFF
HHEEHHHHHCC
>Mature Secondary Structure 
PPILHLRRRHVMPLVVMATGFVADASAETNVTIYGRLNTAIEYSSASTSTNGTSLGSVV
CCHHHHHHHCCCEEEEEEECEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCHHHHHH
RQTNNRSVFGFRGEEDLGGSLKAVWQIESNLSIDTGQGQIAGRNSRIGLQGDYGLFFMGH
HHCCCCEEEEECCCCCCCCCEEEEEEEECCCEEECCCCEEECCCCEEEECCCCCEEEEEC
WTTPYTEATMGYDPYYPTTAGYMALIGNGSTSSSDNVQDTSSFDRRQKNIVQYRSPSLAG
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCE
VSVSLGWGLPEEKLTVPRNPALYSMAAVYERGPLNATVAYEIHQHYQAAGRNDDALKFGI
EEEEECCCCCCCCEECCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCCCEEEHE
AYQLFQGTRLAAIYEHLHYRTDTGDLQRNAYYASLVQQVGTGSVRAGVAYAANGTGSSTS
EEEHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCEEEEECCCCCCCC
TIGYFRSGAETGAIQFTVGYDYPLSKRTALFAYYSRINNKKNAVYDFAINQLGIKAGADP
EEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCH
QTVALGMRHFF
HHEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]