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The map label for this gene is 94310841

Identifier: 94310841

GI number: 94310841

Start: 2072132

End: 2072869

Strand: Direct

Name: 94310841

Synonym: Rmet_1903

Alternate gene names: NA

Gene position: 2072132-2072869 (Clockwise)

Preceding gene: 94310840

Following gene: 335055564

Centisome position: 52.75

GC content: 59.08

Gene sequence:

>738_bases
ATGATTTCCGTCATTCTTATCGTCTTTGCTTGCTGCTTCGTACTGGAGCGCATTGCGCCGAGCTGGCCCCTGCCGCGCGT
GCGCACATGGCCTGTTCGAGTCCTGCTGGTCAACGCCGTCCAACTCGGTGTTGTGTTGCTCGCCGGCATGAGTTGGGAAC
GGTGGCTGGCATCGTGGTCGCTGTTCCGCCTCTCGGACCATGTTTCGCCGGCCGCCGGGGGGCTCCTCGCCTACTTCATC
GCGACCTTCGTCTTCTACTGGTGGCATCGCTGGCGCCACGAGTCGGACTTGCTCTGGCGCCTGTTCCACCAGATCCATCA
CAGCCCGCAACGGCTTGAGGTGATCACGTCGTTCTACAAGCACCCCGCTGAGATGGTTGTCAATTCAATAATCGGCAGCC
TGTTGGTCTACACGTTGCTTGGCCTGTCGCTTGAGGCGGGCGGCGTCTATACGCTGTGCACTGCGTTGGGTGAATTCTTC
TATCACACCAATGTCAGGTCGCCACGTTGGGTCGGATTTGTGTTCCAACGGCCAGAAATGCATCGCATCCACCATCGTCA
TGGGCATCACCGGAACAACTACGGTGACATCACCTGGTGGGACATGCTCTTCGGCACCTATGAGAATCCGGCCGAATGGC
GGGACAGTTGCGGCTTTGATAACAACCGCGAACAGCGGCTGACGGAGATGCTGGCCTGGCGTGATGTCCATGCTGATAAG
CGGCCGGATTCGCGGTGA

Upstream 100 bases:

>100_bases
CACCTGCCAGCCTCCTTTGCAGCCCCGCACTGGAACTGCTTTTCGATGGCACCGTCCAGCCAGCGCATGCTGCTGCCAAC
CGGTCCGGAGGAGCACAAGC

Downstream 100 bases:

>100_bases
TATGGACTAGCGGCTACAGCAGACTTGACCCGGGTCGTCCACGAATAGAGTCCAGCAATGCTCCCACAGCGGCGTGATTG
GGCCCGCCATGCTGAACATC

Product: hypothetical protein

Products: NA

Alternate protein names: Fatty Acid Hydroxylase; Methyltransferase Type

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MISVILIVFACCFVLERIAPSWPLPRVRTWPVRVLLVNAVQLGVVLLAGMSWERWLASWSLFRLSDHVSPAAGGLLAYFI
ATFVFYWWHRWRHESDLLWRLFHQIHHSPQRLEVITSFYKHPAEMVVNSIIGSLLVYTLLGLSLEAGGVYTLCTALGEFF
YHTNVRSPRWVGFVFQRPEMHRIHHRHGHHRNNYGDITWWDMLFGTYENPAEWRDSCGFDNNREQRLTEMLAWRDVHADK
RPDSR

Sequences:

>Translated_245_residues
MISVILIVFACCFVLERIAPSWPLPRVRTWPVRVLLVNAVQLGVVLLAGMSWERWLASWSLFRLSDHVSPAAGGLLAYFI
ATFVFYWWHRWRHESDLLWRLFHQIHHSPQRLEVITSFYKHPAEMVVNSIIGSLLVYTLLGLSLEAGGVYTLCTALGEFF
YHTNVRSPRWVGFVFQRPEMHRIHHRHGHHRNNYGDITWWDMLFGTYENPAEWRDSCGFDNNREQRLTEMLAWRDVHADK
RPDSR
>Mature_245_residues
MISVILIVFACCFVLERIAPSWPLPRVRTWPVRVLLVNAVQLGVVLLAGMSWERWLASWSLFRLSDHVSPAAGGLLAYFI
ATFVFYWWHRWRHESDLLWRLFHQIHHSPQRLEVITSFYKHPAEMVVNSIIGSLLVYTLLGLSLEAGGVYTLCTALGEFF
YHTNVRSPRWVGFVFQRPEMHRIHHRHGHHRNNYGDITWWDMLFGTYENPAEWRDSCGFDNNREQRLTEMLAWRDVHADK
RPDSR

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28912; Mature: 28912

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVILIVFACCFVLERIAPSWPLPRVRTWPVRVLLVNAVQLGVVLLAGMSWERWLASWS
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LFRLSDHVSPAAGGLLAYFIATFVFYWWHRWRHESDLLWRLFHQIHHSPQRLEVITSFYK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
HPAEMVVNSIIGSLLVYTLLGLSLEAGGVYTLCTALGEFFYHTNVRSPRWVGFVFQRPEM
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH
HRIHHRHGHHRNNYGDITWWDMLFGTYENPAEWRDSCGFDNNREQRLTEMLAWRDVHADK
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
RPDSR
CCCCC
>Mature Secondary Structure
MISVILIVFACCFVLERIAPSWPLPRVRTWPVRVLLVNAVQLGVVLLAGMSWERWLASWS
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LFRLSDHVSPAAGGLLAYFIATFVFYWWHRWRHESDLLWRLFHQIHHSPQRLEVITSFYK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
HPAEMVVNSIIGSLLVYTLLGLSLEAGGVYTLCTALGEFFYHTNVRSPRWVGFVFQRPEM
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH
HRIHHRHGHHRNNYGDITWWDMLFGTYENPAEWRDSCGFDNNREQRLTEMLAWRDVHADK
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
RPDSR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA