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The map label for this gene is ybiF [C]

Identifier: 94310829

GI number: 94310829

Start: 2058654

End: 2059556

Strand: Direct

Name: ybiF [C]

Synonym: Rmet_1891

Alternate gene names: 94310829

Gene position: 2058654-2059556 (Clockwise)

Preceding gene: 335055559

Following gene: 335055560

Centisome position: 52.41

GC content: 61.13

Gene sequence:

>903_bases
ATGAATGCCTATCTGGCTCCAGCAGGCGCGAGTGCAATCACGCCGACTTGCGCCCTGCAGGGCGCGGTTGCGATCGCTGC
ATTTGCCTCGAACGCGCTACTGTGCCGCGTCGCACTGTTCACTTACTCCATCGACGCAGCGACATTCTCCGATATCCGGC
TGCTGGCCGGAGGCGCGACGTTACTGGTCGTGACGAAGCTGAAACCGGAGTACACCCGGCAGCCCAATCCTGACCCTGAC
TGGATCTCAGCTACAGCGCTGGGGATTTTCGTGATCCTGTTCTCATTGTCGTATCTATCCCTCGGCGTCAGTTTCGGTGC
GCTCGTGTTGTTCGGGACGGTACAACTGACGATATTTATTGCCTGCCTTCTCAAAGGCGAGCGCTTCCACCGCGTGGCGC
TGATGGGCTATCTCCTGGCTATTGCCGGACTGTTATACCTGACCACACCCGGCATCGGCGTTCCGCGATTCTCCGGCTTG
CTGATGATGGTTGGGGCGGGCGTGGCATGGGGGATCTATACCTTGCGAGGCAGGCGAGCCGCAAGTCCACTCTCGGCAAC
GGCAGGAAACTTCCTGCGCGCGACTCCGATCTGCATCGTCCTCGGTTGGATGCTTCACGGCCATGCCCACGCGAGCGTAG
CCGGGGTTGCCCTCGCTGTGGCGTCAGGGGCTGTGACATCTGCTGTCGGCTTTGTCGTGTGGGCGTCGGTAATCCGAAAG
CTGCCGGCGATGTCCGCGGCCACCATCCAGCTACTGGTGCCACCCGTTGCAGCACTTGGCGGCGTTCTGTTCCTGCAGGA
ACCCGTAAGTACGCGTCTTGTTGTCAGTTTCGTTGCCGTCCTGTTCGGCGTCTGGCTGGCAGCGTCGGTTGGTGCAAGGC
ACAGCGTCACGGCTCGACGTTAG

Upstream 100 bases:

>100_bases
TATTTTCGGACGTCATCGAGCTACCTATTCTCCAGCAGACGCAAGGGTCGCGGCGCAATGCGCCCGTCAAAGGCCTGCGA
CGCTAAAGAAAGGAAGGGCG

Downstream 100 bases:

>100_bases
CGAAGCCTCCATGGGGAAGATGCATTCAGTTTGCGGCCGGCTTGGCTCGCCGCAGCCCATTTACGCGTCAGGTGCCACGA
TGAAAGCAGCAATTGGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNAYLAPAGASAITPTCALQGAVAIAAFASNALLCRVALFTYSIDAATFSDIRLLAGGATLLVVTKLKPEYTRQPNPDPD
WISATALGIFVILFSLSYLSLGVSFGALVLFGTVQLTIFIACLLKGERFHRVALMGYLLAIAGLLYLTTPGIGVPRFSGL
LMMVGAGVAWGIYTLRGRRAASPLSATAGNFLRATPICIVLGWMLHGHAHASVAGVALAVASGAVTSAVGFVVWASVIRK
LPAMSAATIQLLVPPVAALGGVLFLQEPVSTRLVVSFVAVLFGVWLAASVGARHSVTARR

Sequences:

>Translated_300_residues
MNAYLAPAGASAITPTCALQGAVAIAAFASNALLCRVALFTYSIDAATFSDIRLLAGGATLLVVTKLKPEYTRQPNPDPD
WISATALGIFVILFSLSYLSLGVSFGALVLFGTVQLTIFIACLLKGERFHRVALMGYLLAIAGLLYLTTPGIGVPRFSGL
LMMVGAGVAWGIYTLRGRRAASPLSATAGNFLRATPICIVLGWMLHGHAHASVAGVALAVASGAVTSAVGFVVWASVIRK
LPAMSAATIQLLVPPVAALGGVLFLQEPVSTRLVVSFVAVLFGVWLAASVGARHSVTARR
>Mature_300_residues
MNAYLAPAGASAITPTCALQGAVAIAAFASNALLCRVALFTYSIDAATFSDIRLLAGGATLLVVTKLKPEYTRQPNPDPD
WISATALGIFVILFSLSYLSLGVSFGALVLFGTVQLTIFIACLLKGERFHRVALMGYLLAIAGLLYLTTPGIGVPRFSGL
LMMVGAGVAWGIYTLRGRRAASPLSATAGNFLRATPICIVLGWMLHGHAHASVAGVALAVASGAVTSAVGFVVWASVIRK
LPAMSAATIQLLVPPVAALGGVLFLQEPVSTRLVVSFVAVLFGVWLAASVGARHSVTARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31094; Mature: 31094

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAYLAPAGASAITPTCALQGAVAIAAFASNALLCRVALFTYSIDAATFSDIRLLAGGAT
CCCEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHEECCCE
LLVVTKLKPEYTRQPNPDPDWISATALGIFVILFSLSYLSLGVSFGALVLFGTVQLTIFI
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACLLKGERFHRVALMGYLLAIAGLLYLTTPGIGVPRFSGLLMMVGAGVAWGIYTLRGRRA
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCC
ASPLSATAGNFLRATPICIVLGWMLHGHAHASVAGVALAVASGAVTSAVGFVVWASVIRK
CCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPAMSAATIQLLVPPVAALGGVLFLQEPVSTRLVVSFVAVLFGVWLAASVGARHSVTARR
CCCCCHHHHHHHHCCHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNAYLAPAGASAITPTCALQGAVAIAAFASNALLCRVALFTYSIDAATFSDIRLLAGGAT
CCCEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHEECCCE
LLVVTKLKPEYTRQPNPDPDWISATALGIFVILFSLSYLSLGVSFGALVLFGTVQLTIFI
EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ACLLKGERFHRVALMGYLLAIAGLLYLTTPGIGVPRFSGLLMMVGAGVAWGIYTLRGRRA
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCC
ASPLSATAGNFLRATPICIVLGWMLHGHAHASVAGVALAVASGAVTSAVGFVVWASVIRK
CCCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPAMSAATIQLLVPPVAALGGVLFLQEPVSTRLVVSFVAVLFGVWLAASVGARHSVTARR
CCCCCHHHHHHHHCCHHHHCCHHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 1938886 [H]