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The map label for this gene is yhiR [C]

Identifier: 94310826

GI number: 94310826

Start: 2055461

End: 2056318

Strand: Direct

Name: yhiR [C]

Synonym: Rmet_1888

Alternate gene names: 94310826

Gene position: 2055461-2056318 (Clockwise)

Preceding gene: 94310819

Following gene: 335055556

Centisome position: 52.33

GC content: 61.77

Gene sequence:

>858_bases
ATGCTCAGTTATCGTCACGCCTTCCACGCCGGCAATCATGCCGATGTCCTCAAGCACGCCGTCGTTGTCCAGTTGCTGGA
CTACCTGACGCAGAAGGACAAGGCGTTCTGGTACATCGACACCCACGCCGGCGCCGGGCTCTATGCCCTTGATCACGCCT
ACGCGCAGAAAAAATCGGAGTTCGAGACCGGCATTGGCCCGCTCTGGCGCGCCGCCGCGAACGGCCAGCCGATGCCTGCC
CTGCTCGACGCCTATCTCGAACAGGTACGTGCGCTGAACGAGGACGGCAATCTCAAGCACTATCCTGGTTCGCCGTGGCT
GGCGTGGCAAATGCTGCGCGATGCGGACCGCCTGCGCCTGTTCGAACTGCACAGCACCGAGATCCAGGTACTGCGCGACA
ATTTCCGCGGCGCGGGACGCAAGGTCATGCTCTATGACGGCGATGGCTTCAATGGCATCAAGGCTATCCTGCCGCCCCCG
CCCCGCCGCGCACTGGTGCTGATCGACCCTTCTTACGAAGACAAACAAGACTACGCCCGTACGCTCGATACGCTCAATGC
TGGCCTGGAGCGTTTCGCCACGGGCATCTATGCGATCTGGTATCCCGAGGTGCAACGACGGGAATCAACCCAGCTACCGG
CCCAGCTGAAGCGCCTGCCGCTCAAGAGCTGGCTGCACGTCACACTGACAGTCAAACACCCGGTCGCGGGCGGTCTGGGC
TTGCATGGCAGTGGTATGTTCATCGTCAATCCTCCCTGGACGCTCAAGGCGGAGCTCCAGGAAGCCATGCCGAAACTGGT
CGAACTGTTTGGTCAGGACGGCGGCGCGAAGTTCACGCTCGAGTCGCTGGATGGCTAA

Upstream 100 bases:

>100_bases
ATGGCGGCGGATGGTAGCATAGCGCCCTCCCCGCGCACCGCCCTGAAAATGCCTTCAAGGCCGTATTTGCGCGAAGTTTG
CGCGCCGTCATTCCCTCGCC

Downstream 100 bases:

>100_bases
ATCTGCACTTTGACTATCACCATAAAGTGCTTCATGCAAATCTTTCTGACTGTAAGTTGGATAAAATTAACTCATTCGAG
TTAATCCCCTCGTACGTAGG

Product: putative DNA (exogenous) processing protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MLSYRHAFHAGNHADVLKHAVVVQLLDYLTQKDKAFWYIDTHAGAGLYALDHAYAQKKSEFETGIGPLWRAAANGQPMPA
LLDAYLEQVRALNEDGNLKHYPGSPWLAWQMLRDADRLRLFELHSTEIQVLRDNFRGAGRKVMLYDGDGFNGIKAILPPP
PRRALVLIDPSYEDKQDYARTLDTLNAGLERFATGIYAIWYPEVQRRESTQLPAQLKRLPLKSWLHVTLTVKHPVAGGLG
LHGSGMFIVNPPWTLKAELQEAMPKLVELFGQDGGAKFTLESLDG

Sequences:

>Translated_285_residues
MLSYRHAFHAGNHADVLKHAVVVQLLDYLTQKDKAFWYIDTHAGAGLYALDHAYAQKKSEFETGIGPLWRAAANGQPMPA
LLDAYLEQVRALNEDGNLKHYPGSPWLAWQMLRDADRLRLFELHSTEIQVLRDNFRGAGRKVMLYDGDGFNGIKAILPPP
PRRALVLIDPSYEDKQDYARTLDTLNAGLERFATGIYAIWYPEVQRRESTQLPAQLKRLPLKSWLHVTLTVKHPVAGGLG
LHGSGMFIVNPPWTLKAELQEAMPKLVELFGQDGGAKFTLESLDG
>Mature_285_residues
MLSYRHAFHAGNHADVLKHAVVVQLLDYLTQKDKAFWYIDTHAGAGLYALDHAYAQKKSEFETGIGPLWRAAANGQPMPA
LLDAYLEQVRALNEDGNLKHYPGSPWLAWQMLRDADRLRLFELHSTEIQVLRDNFRGAGRKVMLYDGDGFNGIKAILPPP
PRRALVLIDPSYEDKQDYARTLDTLNAGLERFATGIYAIWYPEVQRRESTQLPAQLKRLPLKSWLHVTLTVKHPVAGGLG
LHGSGMFIVNPPWTLKAELQEAMPKLVELFGQDGGAKFTLESLDG

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=264, Percent_Identity=43.5606060606061, Blast_Score=225, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32009; Mature: 32009

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHAFHAGNHADVLKHAVVVQLLDYLTQKDKAFWYIDTHAGAGLYALDHAYAQKKSE
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
FETGIGPLWRAAANGQPMPALLDAYLEQVRALNEDGNLKHYPGSPWLAWQMLRDADRLRL
HHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHEEE
FELHSTEIQVLRDNFRGAGRKVMLYDGDGFNGIKAILPPPPRRALVLIDPSYEDKQDYAR
EEECCHHHHHHHHCCCCCCCEEEEEECCCCCCCEECCCCCCCCEEEEECCCCCCHHHHHH
TLDTLNAGLERFATGIYAIWYPEVQRRESTQLPAQLKRLPLKSWLHVTLTVKHPVAGGLG
HHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCC
LHGSGMFIVNPPWTLKAELQEAMPKLVELFGQDGGAKFTLESLDG
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
>Mature Secondary Structure
MLSYRHAFHAGNHADVLKHAVVVQLLDYLTQKDKAFWYIDTHAGAGLYALDHAYAQKKSE
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
FETGIGPLWRAAANGQPMPALLDAYLEQVRALNEDGNLKHYPGSPWLAWQMLRDADRLRL
HHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHEEE
FELHSTEIQVLRDNFRGAGRKVMLYDGDGFNGIKAILPPPPRRALVLIDPSYEDKQDYAR
EEECCHHHHHHHHCCCCCCCEEEEEECCCCCCCEECCCCCCCCEEEEECCCCCCHHHHHH
TLDTLNAGLERFATGIYAIWYPEVQRRESTQLPAQLKRLPLKSWLHVTLTVKHPVAGGLG
HHHHHHHHHHHHHCCEEEEECCCHHHCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCC
LHGSGMFIVNPPWTLKAELQEAMPKLVELFGQDGGAKFTLESLDG
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]