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The map label for this gene is yiaO [C]

Identifier: 94310812

GI number: 94310812

Start: 2034857

End: 2035840

Strand: Direct

Name: yiaO [C]

Synonym: Rmet_1874

Alternate gene names: 94310812

Gene position: 2034857-2035840 (Clockwise)

Preceding gene: 94310811

Following gene: 94310813

Centisome position: 51.8

GC content: 62.09

Gene sequence:

>984_bases
ATGCGAGTCAAGGTATTGGCAGTTGCGGTGACGATGGCGGTGACAGGCGTTCTGCTGACCGCCACGGCGGCACGGGCGGA
TACGAAGTGGGACCTGCCCACGGGCTATCCGGCCACCAATCTGCACACGGAAAACCTGCAGCAGATGGCCAACGATGTCG
ACAAGGCCACCGGAGGCAAGCTCAAGATCGTGCTGCATCCCAATGGCTCGCTGCTCAAGGCCAATGAGATCAAGCGTGGC
GTGCAGACCGGCCAGGTGCAGATGGGTGAAATCCTGATGTCGACGCTGGCCAACGAAAACCCGGTTTTCGGCGTCGACGC
GGTGCCTTTCCTGGCCACGAGCTATGGCGATTCCTACAAGCTCTGGCAAGCCTCGCGAACCGTCACTGACAAGATACTCG
ACCGCCAGGGCATGAAACTGCTCTACGCGGTGGCCTGGCCGCCGCAGGGCATCTACGCGAACAAGCCCCTGAACAGTGCG
GCGGACATGAAGGGCCTGAAATGGCGCGCCTACAACCCCGCAACGTCGAAGATCGCCGAGCTGGTCAGCGCCCAGCCGGT
GACGATCCAGGCCGCTGACCTGGCGCAGGCGCTTGCCACGGGCACGGTCAACTCGTTCATGTCGTCTGGCGCAACGGGCG
TCGATACCAAGGTATGGGAGTCGGTGAAGTACTTCTATACCGTCGATGCGTGGCTGCCGAAGAACATGCTCGTCGTCAGC
AAGAAGGCCTTTAACGGGCTCGACAAGCCCACCCAGGACGCCCTGCTCAAGGCCGTGGCCGATGCCGAGAAGCGCGGCTG
GCAGGTCTCCGAACAGAAGACGCGCGAATATCTGGCGACGCTCTCCAAGAACGGCATGACCGTGGCGCCGCCTTCGCCGC
AGCTCAAATCCGACATGCAGAAGGTAGGCGAAGTCATGGTTGCCGACTGGGCGAAGAGCGCCGGCGACGATGGCAAGGCC
ATTCTCGACGCCTACAAGAAGTAG

Upstream 100 bases:

>100_bases
ATCACCAACAACCCGGGAATCGGCGCAGGTAGTTCCAGGAGGATAGTCAAACCCGCGTAGTCGGGCAGGCGCCCGCGCGC
AACATCAGGGAGAGATGGAA

Downstream 100 bases:

>100_bases
ATCCGAGCCATTTGCGAAAGCAGGCCCGCGACAATCCATCGTGGCGCCCGCCTGCTTTCGCCCGTGCATTGCAGCAGGCG
CGCGCCGCTGATCGCGCGCG

Product: TRAP-type transporter, periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MRVKVLAVAVTMAVTGVLLTATAARADTKWDLPTGYPATNLHTENLQQMANDVDKATGGKLKIVLHPNGSLLKANEIKRG
VQTGQVQMGEILMSTLANENPVFGVDAVPFLATSYGDSYKLWQASRTVTDKILDRQGMKLLYAVAWPPQGIYANKPLNSA
ADMKGLKWRAYNPATSKIAELVSAQPVTIQAADLAQALATGTVNSFMSSGATGVDTKVWESVKYFYTVDAWLPKNMLVVS
KKAFNGLDKPTQDALLKAVADAEKRGWQVSEQKTREYLATLSKNGMTVAPPSPQLKSDMQKVGEVMVADWAKSAGDDGKA
ILDAYKK

Sequences:

>Translated_327_residues
MRVKVLAVAVTMAVTGVLLTATAARADTKWDLPTGYPATNLHTENLQQMANDVDKATGGKLKIVLHPNGSLLKANEIKRG
VQTGQVQMGEILMSTLANENPVFGVDAVPFLATSYGDSYKLWQASRTVTDKILDRQGMKLLYAVAWPPQGIYANKPLNSA
ADMKGLKWRAYNPATSKIAELVSAQPVTIQAADLAQALATGTVNSFMSSGATGVDTKVWESVKYFYTVDAWLPKNMLVVS
KKAFNGLDKPTQDALLKAVADAEKRGWQVSEQKTREYLATLSKNGMTVAPPSPQLKSDMQKVGEVMVADWAKSAGDDGKA
ILDAYKK
>Mature_327_residues
MRVKVLAVAVTMAVTGVLLTATAARADTKWDLPTGYPATNLHTENLQQMANDVDKATGGKLKIVLHPNGSLLKANEIKRG
VQTGQVQMGEILMSTLANENPVFGVDAVPFLATSYGDSYKLWQASRTVTDKILDRQGMKLLYAVAWPPQGIYANKPLNSA
ADMKGLKWRAYNPATSKIAELVSAQPVTIQAADLAQALATGTVNSFMSSGATGVDTKVWESVKYFYTVDAWLPKNMLVVS
KKAFNGLDKPTQDALLKAVADAEKRGWQVSEQKTREYLATLSKNGMTVAPPSPQLKSDMQKVGEVMVADWAKSAGDDGKA
ILDAYKK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=271, Percent_Identity=24.7232472324723, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 35310; Mature: 35310

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKVLAVAVTMAVTGVLLTATAARADTKWDLPTGYPATNLHTENLQQMANDVDKATGGK
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCE
LKIVLHPNGSLLKANEIKRGVQTGQVQMGEILMSTLANENPVFGVDAVPFLATSYGDSYK
EEEEECCCCCEEEHHHHHHCHHCCCHHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCCEE
LWQASRTVTDKILDRQGMKLLYAVAWPPQGIYANKPLNSAADMKGLKWRAYNPATSKIAE
EHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHCCCCCEEEECCCHHHHHHH
LVSAQPVTIQAADLAQALATGTVNSFMSSGATGVDTKVWESVKYFYTVDAWLPKNMLVVS
HHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEECCCCCCEEEEE
KKAFNGLDKPTQDALLKAVADAEKRGWQVSEQKTREYLATLSKNGMTVAPPSPQLKSDMQ
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHH
KVGEVMVADWAKSAGDDGKAILDAYKK
HHHHHHHHHHHHCCCCCCHHHHHHHCC
>Mature Secondary Structure
MRVKVLAVAVTMAVTGVLLTATAARADTKWDLPTGYPATNLHTENLQQMANDVDKATGGK
CCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCE
LKIVLHPNGSLLKANEIKRGVQTGQVQMGEILMSTLANENPVFGVDAVPFLATSYGDSYK
EEEEECCCCCEEEHHHHHHCHHCCCHHHHHHHHHHHCCCCCEECCCCHHHHHHCCCCCEE
LWQASRTVTDKILDRQGMKLLYAVAWPPQGIYANKPLNSAADMKGLKWRAYNPATSKIAE
EHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHCCCCCEEEECCCHHHHHHH
LVSAQPVTIQAADLAQALATGTVNSFMSSGATGVDTKVWESVKYFYTVDAWLPKNMLVVS
HHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEECCCCCCEEEEE
KKAFNGLDKPTQDALLKAVADAEKRGWQVSEQKTREYLATLSKNGMTVAPPSPQLKSDMQ
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHH
KVGEVMVADWAKSAGDDGKAILDAYKK
HHHHHHHHHHHHCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]