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The map label for this gene is 94310809

Identifier: 94310809

GI number: 94310809

Start: 2030521

End: 2031108

Strand: Reverse

Name: 94310809

Synonym: Rmet_1871

Alternate gene names: NA

Gene position: 2031108-2030521 (Counterclockwise)

Preceding gene: 94310818

Following gene: 94310808

Centisome position: 51.71

GC content: 65.48

Gene sequence:

>588_bases
ATGGCACGCAAGCCCGTTTCGGACAGCCCCGCCAACGCTGAGCCAGTGGCGAGCCCCTCACCGGCCGCGCCACTGGCGCG
CGCCGCCGGCGTCAACATTGTGTCGTCGTCGCATCTGGTTTCGGTGCGTAGCCCGGAATTGTCGGAATTCGAGTTCGGGC
TGAATACCGCTTACAACGCCTACAGCCGGTGGGTGGTGCGCTGCATGGGTGCCGCTGGCGTGCGCGACCTGACGTTCCTG
GACGTGCTGGTACTGCACCACGTCAATCATCGCGGACGCGCCAAGCGGCTGGCGGACATCTGCTTCGTGCTCAACGTCGA
AGACACCCACCTGGTGACATACGCGCTCAAGAAGCTCGTGGGGCTGGGACTGGTGGCCGGAGAGCGGGTTGGCAAGGAGG
CCACTTACGCCACCACGCAGGCCGGTGCCGACGCCTGCGCCAGGTACCGCGAGATCCGCGAGCAGTGCCTGACGAGCAAT
TTCACGGAGGGTAGCGAGGAAAACCTGGAGATCGGCGAACTGGCACGCCTGCTGCGTGTGTTGACCGGTCTCTACGAGCA
GGCGGCGCGCTCCGCCACCTCTCTTTAG

Upstream 100 bases:

>100_bases
GGCGGCGGATTTCTCCTCGAATTGCCGATAAACTGTCGCGTAAATCGCCCAAATCCGGGCGCCCAATGATCCAAAATCGC
ACCCCAGGAGACTGCTTTTC

Downstream 100 bases:

>100_bases
AAATGTGACGCATTGTGCTCTATAACGAGGCTTGGCCTGCCGATAATGACGTCGGTCAGGCCGTCCTTGACCGCTTTCTC
CCGGAATGTCCGTCGGTACC

Product: putative transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator; MarR Family Regulatory Helix-Turn-Helix Protein; Transcription Regulator MarR-Type HTH Domain

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MARKPVSDSPANAEPVASPSPAAPLARAAGVNIVSSSHLVSVRSPELSEFEFGLNTAYNAYSRWVVRCMGAAGVRDLTFL
DVLVLHHVNHRGRAKRLADICFVLNVEDTHLVTYALKKLVGLGLVAGERVGKEATYATTQAGADACARYREIREQCLTSN
FTEGSEENLEIGELARLLRVLTGLYEQAARSATSL

Sequences:

>Translated_195_residues
MARKPVSDSPANAEPVASPSPAAPLARAAGVNIVSSSHLVSVRSPELSEFEFGLNTAYNAYSRWVVRCMGAAGVRDLTFL
DVLVLHHVNHRGRAKRLADICFVLNVEDTHLVTYALKKLVGLGLVAGERVGKEATYATTQAGADACARYREIREQCLTSN
FTEGSEENLEIGELARLLRVLTGLYEQAARSATSL
>Mature_194_residues
ARKPVSDSPANAEPVASPSPAAPLARAAGVNIVSSSHLVSVRSPELSEFEFGLNTAYNAYSRWVVRCMGAAGVRDLTFLD
VLVLHHVNHRGRAKRLADICFVLNVEDTHLVTYALKKLVGLGLVAGERVGKEATYATTQAGADACARYREIREQCLTSNF
TEGSEENLEIGELARLLRVLTGLYEQAARSATSL

Specific function: Unknown

COG id: COG5631

COG function: function code K; Predicted transcription regulator, contains HTH domain (MarR family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21042; Mature: 20911

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKPVSDSPANAEPVASPSPAAPLARAAGVNIVSSSHLVSVRSPELSEFEFGLNTAYNA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEECCCCEEEECCCCCHHHHHCHHHHHHH
YSRWVVRCMGAAGVRDLTFLDVLVLHHVNHRGRAKRLADICFVLNVEDTHLVTYALKKLV
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHH
GLGLVAGERVGKEATYATTQAGADACARYREIREQCLTSNFTEGSEENLEIGELARLLRV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LTGLYEQAARSATSL
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARKPVSDSPANAEPVASPSPAAPLARAAGVNIVSSSHLVSVRSPELSEFEFGLNTAYNA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCEEECCCCEEEECCCCCHHHHHCHHHHHHH
YSRWVVRCMGAAGVRDLTFLDVLVLHHVNHRGRAKRLADICFVLNVEDTHLVTYALKKLV
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHH
GLGLVAGERVGKEATYATTQAGADACARYREIREQCLTSNFTEGSEENLEIGELARLLRV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
LTGLYEQAARSATSL
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA