| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is ispZ
Identifier: 94310804
GI number: 94310804
Start: 2023877
End: 2024416
Strand: Direct
Name: ispZ
Synonym: Rmet_1866
Alternate gene names: 94310804
Gene position: 2023877-2024416 (Clockwise)
Preceding gene: 94310803
Following gene: 94310805
Centisome position: 51.52
GC content: 58.7
Gene sequence:
>540_bases ATGAAATTTCTTTTCGACCTGTTCCCGGTCATCCTTTTTTTCGTCGCCTTCAAGCTGTTCGGCATCTATCCCGCGACGGC CGTGGCGATCGGCGCGACGGTGGTCCAGATTGCCTGGGTTCATTTCCGTCACGGCAAGGCCGAGCCCATGCAATGGGTCA GCCTGGCGATCATCGCCGTATTCGGTGGCGCCACGATCCTGCTGCACAACGAGACCTTCATCAAGTGGAAACCGACGGTG CTCTACTGGCTGTTCGCGGTCACCCTGATCGGCTCGGTCATCGGATGGCGCAAGAACCTTATCCGCGCCATGATGGAAAA GCAGGTGACGCTGCCCGAACCGATGTGGGGCCGCCTCAACGTCGCATGGGCGGGCTTTTTCGCCGTGATGGGCGTGCTCA ACCTGTATGTGGCGTACCAGTTTTCGACCGACACCTGGGTCAACTTCAAGCTGTTCGGCAGCATGGGCCTGATGCTGGTG TTCATTGTGGCGCAGAGTATCTGGCTGTCGCGCCATATCCAGGAAACCCCGTCCGAGTAA
Upstream 100 bases:
>100_bases GGTGACGACACCCGCACTCCGGTCGCATGACCGATCTGCCAGGCGGCGGATCGCCCGCGGGCCAGCCTGATCGCCGATCC GCCAACCTTATCGCATCCGC
Downstream 100 bases:
>100_bases GCCACCGCGCCGCGGACTCATCGATTCAGAACAGAACAGAAGGAAATCCGGATGGCAGCTGACCCCGCCACCATCGAAGC GCTGCTCCAGGCAGCGCTTG
Product: intracellular septation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKFLFDLFPVILFFVAFKLFGIYPATAVAIGATVVQIAWVHFRHGKAEPMQWVSLAIIAVFGGATILLHNETFIKWKPTV LYWLFAVTLIGSVIGWRKNLIRAMMEKQVTLPEPMWGRLNVAWAGFFAVMGVLNLYVAYQFSTDTWVNFKLFGSMGLMLV FIVAQSIWLSRHIQETPSE
Sequences:
>Translated_179_residues MKFLFDLFPVILFFVAFKLFGIYPATAVAIGATVVQIAWVHFRHGKAEPMQWVSLAIIAVFGGATILLHNETFIKWKPTV LYWLFAVTLIGSVIGWRKNLIRAMMEKQVTLPEPMWGRLNVAWAGFFAVMGVLNLYVAYQFSTDTWVNFKLFGSMGLMLV FIVAQSIWLSRHIQETPSE >Mature_179_residues MKFLFDLFPVILFFVAFKLFGIYPATAVAIGATVVQIAWVHFRHGKAEPMQWVSLAIIAVFGGATILLHNETFIKWKPTV LYWLFAVTLIGSVIGWRKNLIRAMMEKQVTLPEPMWGRLNVAWAGFFAVMGVLNLYVAYQFSTDTWVNFKLFGSMGLMLV FIVAQSIWLSRHIQETPSE
Specific function: Involved in cell division; probably involved in intracellular septation
COG id: COG2917
COG function: function code D; Intracellular septation protein A
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispZ family
Homologues:
Organism=Escherichia coli, GI1787507, Length=181, Percent_Identity=43.646408839779, Blast_Score=150, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ISPZ_RALME (Q1LM81)
Other databases:
- EMBL: CP000352 - RefSeq: YP_584014.1 - STRING: Q1LM81 - GeneID: 4038668 - GenomeReviews: CP000352_GR - KEGG: rme:Rmet_1866 - eggNOG: COG2917 - HOGENOM: HBG663014 - OMA: HDETFIK - PhylomeDB: Q1LM81 - ProtClustDB: PRK00259 - BioCyc: RMET266264:RMET_1866-MONOMER - HAMAP: MF_00189 - InterPro: IPR006008 - TIGRFAMs: TIGR00997
Pfam domain/function: PF04279 IspA
EC number: NA
Molecular weight: Translated: 20409; Mature: 20409
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x15f893ec)-; HASH(0x167d0a6c)-; HASH(0x1656e008)-; HASH(0x16812a0c)-; HASH(0x163ad778)-; HASH(0x138522a8)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLFDLFPVILFFVAFKLFGIYPATAVAIGATVVQIAWVHFRHGKAEPMQWVSLAIIAV CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FGGATILLHNETFIKWKPTVLYWLFAVTLIGSVIGWRKNLIRAMMEKQVTLPEPMWGRLN HCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH VAWAGFFAVMGVLNLYVAYQFSTDTWVNFKLFGSMGLMLVFIVAQSIWLSRHIQETPSE HHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCH >Mature Secondary Structure MKFLFDLFPVILFFVAFKLFGIYPATAVAIGATVVQIAWVHFRHGKAEPMQWVSLAIIAV CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FGGATILLHNETFIKWKPTVLYWLFAVTLIGSVIGWRKNLIRAMMEKQVTLPEPMWGRLN HCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH VAWAGFFAVMGVLNLYVAYQFSTDTWVNFKLFGSMGLMLVFIVAQSIWLSRHIQETPSE HHHHHHHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA