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The map label for this gene is yjjL [H]

Identifier: 94310673

GI number: 94310673

Start: 1879570

End: 1880901

Strand: Reverse

Name: yjjL [H]

Synonym: Rmet_1735

Alternate gene names: 94310673

Gene position: 1880901-1879570 (Counterclockwise)

Preceding gene: 94310675

Following gene: 94310672

Centisome position: 47.88

GC content: 66.44

Gene sequence:

>1332_bases
ATGCACGGATACCGTTCCACCCTTGCGCCAATGGCAGGCGCGCCTGCCAAGGCCAGGCTGTCGCGATATTACCCGTGGCT
GGTCTTCGCGCTGAGCTTTGGGTTGCTCCTCTCGGACTATATGTCCCGGCAGGTTTTGAATGCGCTGTTCCCAATGCTCA
AGCTCGAGTGGGGACTCAGCGACACTGAATTGGGCGCCTTGGGCGGCGTCGTTGCGTTGATGGTGGGGGTACTGACCTTC
CCGCTGTCGATCCTTGCTGACCGTTGGGGCCGCGTGCGCAGCCTGACGCTGATGGCAGCGCTTTGGAGCCTGGCCACGCT
CGGTTGCGCGCTGGCCAATTCCTTCGGCGAGATGTTCCTCGCACGGCTTTGCGTTGGTATTGGCGAGGCCGCCTATGGCA
GCGTCGGCATTGCCGTGGTGGTCTCGGTATTCCCCCGGCACCTGCGTGCCAGCCTCAGCGCAGCCTTCATCGCCGGTGGC
GCATTCGGCTCGGTACTGGGCATGGGGCTGGGCGGTGTGATTTCCGCTCACTTCGGATGGCGCGTTGCTTTCGGCGGCAT
GGCGCTCTTCGGCCTGATCCTGGTGGCGCTGTACCGCCTGCTGATTACTGAGAAGGGCCTGCTGGCCCGCCGCCAGGAAC
TCGGCGAGGACGTCTCCGCCAGCCAGACGCAGGCCAAGCTGGAGCTTCGCCCGCTGGTCTCCGCGCTGTTCTCCACCCGT
TCGATTCTCTGCGCCTATGTGGGCAGCGCCCTGCAATTGTTCGTCATGGCTTCGATGCTGGCCTGGCTGCCGAGCTACTT
CGGCCGCTACTACGGCATGAGCGGCGCGCAAGCCGGCCTGACTGCCGCCGCTTTTGTGCTGATCGGTGGCGCCGGCATGA
TCATGTGCGGGGCCTTCACCGACTGGATTGCCCGTCATATCCCGGCCCGCAAGTGGATCGTGGCCATCGCCTACAGCGTG
CTCTGCTGCGTGCTGCTGGGCGCAGCCTTCCAGCTGCCGCCGGGCACGGCCCAGCTCGTGCTGATCGGCGCCGGGATGCT
GCTGGCAGGCGGCACGGCCGGCCCGGCCAGCGCCGCGGTGGCCAACCTGACCGCGCCTGCGATTCATGGCTCCGCGTTTG
CCACGCTCACGCTGGTCAACAACCTGCTTGGACTCGCGCCGGGTCCGTTCTTCACCGGCCTGATCGCCGATCACATCGGC
CTGCGCGGCGCGCTGCAGTTCCTGCCGCTGGTTGGCTTGCTGGCCGCCGTCTGCTTCGTTATCGGGCGTCGCACCTACAG
CGCGGACGTACACCGCCTGGAGCGTATGCGTGCCGCCGCCGGCAATCGCTGA

Upstream 100 bases:

>100_bases
TGTCCCGAATGATCAAACCGTAGGCTGCGAATCCTAGATACTTCGCCGGTCACGACCCGACGCTGTCATCACGATGTCAC
GGGTCATTTAGGAGGCAGAC

Downstream 100 bases:

>100_bases
CCCCAACACCATTTACCCGTTTTCGCAATGGACTTTCTGGCTGACACCACCGTACTGTTCGTTCCCGGCTTGCGCGACCA
CGTGCCCGAGCACTGGCAGA

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MHGYRSTLAPMAGAPAKARLSRYYPWLVFALSFGLLLSDYMSRQVLNALFPMLKLEWGLSDTELGALGGVVALMVGVLTF
PLSILADRWGRVRSLTLMAALWSLATLGCALANSFGEMFLARLCVGIGEAAYGSVGIAVVVSVFPRHLRASLSAAFIAGG
AFGSVLGMGLGGVISAHFGWRVAFGGMALFGLILVALYRLLITEKGLLARRQELGEDVSASQTQAKLELRPLVSALFSTR
SILCAYVGSALQLFVMASMLAWLPSYFGRYYGMSGAQAGLTAAAFVLIGGAGMIMCGAFTDWIARHIPARKWIVAIAYSV
LCCVLLGAAFQLPPGTAQLVLIGAGMLLAGGTAGPASAAVANLTAPAIHGSAFATLTLVNNLLGLAPGPFFTGLIADHIG
LRGALQFLPLVGLLAAVCFVIGRRTYSADVHRLERMRAAAGNR

Sequences:

>Translated_443_residues
MHGYRSTLAPMAGAPAKARLSRYYPWLVFALSFGLLLSDYMSRQVLNALFPMLKLEWGLSDTELGALGGVVALMVGVLTF
PLSILADRWGRVRSLTLMAALWSLATLGCALANSFGEMFLARLCVGIGEAAYGSVGIAVVVSVFPRHLRASLSAAFIAGG
AFGSVLGMGLGGVISAHFGWRVAFGGMALFGLILVALYRLLITEKGLLARRQELGEDVSASQTQAKLELRPLVSALFSTR
SILCAYVGSALQLFVMASMLAWLPSYFGRYYGMSGAQAGLTAAAFVLIGGAGMIMCGAFTDWIARHIPARKWIVAIAYSV
LCCVLLGAAFQLPPGTAQLVLIGAGMLLAGGTAGPASAAVANLTAPAIHGSAFATLTLVNNLLGLAPGPFFTGLIADHIG
LRGALQFLPLVGLLAAVCFVIGRRTYSADVHRLERMRAAAGNR
>Mature_443_residues
MHGYRSTLAPMAGAPAKARLSRYYPWLVFALSFGLLLSDYMSRQVLNALFPMLKLEWGLSDTELGALGGVVALMVGVLTF
PLSILADRWGRVRSLTLMAALWSLATLGCALANSFGEMFLARLCVGIGEAAYGSVGIAVVVSVFPRHLRASLSAAFIAGG
AFGSVLGMGLGGVISAHFGWRVAFGGMALFGLILVALYRLLITEKGLLARRQELGEDVSASQTQAKLELRPLVSALFSTR
SILCAYVGSALQLFVMASMLAWLPSYFGRYYGMSGAQAGLTAAAFVLIGGAGMIMCGAFTDWIARHIPARKWIVAIAYSV
LCCVLLGAAFQLPPGTAQLVLIGAGMLLAGGTAGPASAAVANLTAPAIHGSAFATLTLVNNLLGLAPGPFFTGLIADHIG
LRGALQFLPLVGLLAAVCFVIGRRTYSADVHRLERMRAAAGNR

Specific function: Responsible for the transport of L-galactonate from the periplasm across the inner membrane (Probable). Is essential for growth on L-galactonate as the sole carbon source [H]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI2367379, Length=312, Percent_Identity=27.2435897435897, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1789515, Length=448, Percent_Identity=24.7767857142857, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789152, Length=471, Percent_Identity=22.9299363057325, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17557872, Length=455, Percent_Identity=22.6373626373626, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17539092, Length=397, Percent_Identity=25.6926952141058, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46407; Mature: 46407

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGYRSTLAPMAGAPAKARLSRYYPWLVFALSFGLLLSDYMSRQVLNALFPMLKLEWGLS
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTELGALGGVVALMVGVLTFPLSILADRWGRVRSLTLMAALWSLATLGCALANSFGEMFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLCVGIGEAAYGSVGIAVVVSVFPRHLRASLSAAFIAGGAFGSVLGMGLGGVISAHFGW
HHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHCCH
RVAFGGMALFGLILVALYRLLITEKGLLARRQELGEDVSASQTQAKLELRPLVSALFSTR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SILCAYVGSALQLFVMASMLAWLPSYFGRYYGMSGAQAGLTAAAFVLIGGAGMIMCGAFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
DWIARHIPARKWIVAIAYSVLCCVLLGAAFQLPPGTAQLVLIGAGMLLAGGTAGPASAAV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCCHHHHH
ANLTAPAIHGSAFATLTLVNNLLGLAPGPFFTGLIADHIGLRGALQFLPLVGLLAAVCFV
HHHHCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGRRTYSADVHRLERMRAAAGNR
HHCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHGYRSTLAPMAGAPAKARLSRYYPWLVFALSFGLLLSDYMSRQVLNALFPMLKLEWGLS
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DTELGALGGVVALMVGVLTFPLSILADRWGRVRSLTLMAALWSLATLGCALANSFGEMFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLCVGIGEAAYGSVGIAVVVSVFPRHLRASLSAAFIAGGAFGSVLGMGLGGVISAHFGW
HHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHCCH
RVAFGGMALFGLILVALYRLLITEKGLLARRQELGEDVSASQTQAKLELRPLVSALFSTR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
SILCAYVGSALQLFVMASMLAWLPSYFGRYYGMSGAQAGLTAAAFVLIGGAGMIMCGAFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
DWIARHIPARKWIVAIAYSVLCCVLLGAAFQLPPGTAQLVLIGAGMLLAGGTAGPASAAV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCCHHHHH
ANLTAPAIHGSAFATLTLVNNLLGLAPGPFFTGLIADHIGLRGALQFLPLVGLLAAVCFV
HHHHCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGRRTYSADVHRLERMRAAAGNR
HHCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]