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The map label for this gene is tnp

Identifier: 94310608

GI number: 94310608

Start: 1804904

End: 1805929

Strand: Direct

Name: tnp

Synonym: Rmet_1668

Alternate gene names: NA

Gene position: 1804904-1805929 (Clockwise)

Preceding gene: 335055541

Following gene: 94310609

Centisome position: 45.95

GC content: 59.06

Gene sequence:

>1026_bases
GTGATAAAGGAGCTGCCTGCTGGCGTAGCGAAGGTGCTCAAGCGCCTGCACCATCCGCTGGACGTGATCTTGCTGTGTGT
GCGCTGGTACGTGGCCTATTCGCTGAGCCTGCGTGATCTGGAGGAGATGATGGCCGAGCGTGGCCTCGCGGTCGATCATT
CGATGGTCCACCGCTGGGTCATCAAGCTACTGCCGCTGTTCGAGAAGGCGTTTCGTCGTCACAAGCGGTCGGTTAGCAAG
AGCTGGCGCATGGACGAGACCTACCTCAAGGTGCGGGGCAAGTGGGCATACCTCTATCGTGCCGTGGACAAAGCCGGCAA
CACCATCGACTTCCTGCTGTGTGCCCGCCGTGACAAGGTTGCGGCCCGGCGTTACTTCGAAAAGGCCATCGGCCAGAACG
GCGCTCCTGATACCGTGGCTATCGACAAAAGCGCGGCCAACCTGGCCGCGCTGCACGCCGTGAATGCGCATCGAGAGACG
CCCATCAGGATCCGTCAGCGCAAGTACCTGAACAACATCGTCGAGCAGGACCATCGGGCCATCAAACGACGAGCACGACC
CATGCTCGGGTTCAAGAATTTCCGTTGCGCGCGCATCCTTATCGGCGGCATCGAAACCATGCATATGATCGCCAAGGGCA
GATGCGGGGACCCGAAGGCATTCGCTTGTCCGCCGCGCAGCAATTCCATTCCCTGGTTTCATAGACCAGCGCACTCCAGC
CCACCGGCTTCGACCAACCGGCCTTATCGCGACAGAACCAAGGGCGCAGGTGCTCCAGCCTTTGGAATTCAGACACCATT
CGATAGCTCACGCGGCTCGTTGCTACTGCAATGGCAGGCCCGCTTAATGATCTTCGATGCCCTCTCACCCACTTCCAGAT
TTCACTCAGTGCCGGAGGCAATGCATCTTGGCAAAGTCGTGGTGGATCGCGGCTTCCGCCGCCCGCAAAGCTCATTGAGA
GTCGACACCGCTTCATACCGGATCAACCTCGCAGGAGAAAGACATGTATCAAGAACACACCAATGA

Upstream 100 bases:

>100_bases
CCACCGGGGCGCGGCTAGCGGTTCTGTCGCGCTAAGGGTGCCGGGGTGAGATTTCAGCAGACATTGCCCGGAACGGAAGC
GCGTCGTGAAGAAAGTATCT

Downstream 100 bases:

>100_bases
CCGCGAGATTGTTGTCATGAGGAGCGCACGCAGTATTCGGACCTCACGTTCTGCTTGCCTGGCAGTGATCGTTGCGATTG
CATGCCAGTTTGTGGCAGAT

Product: transposase (DDE site) ISRme7

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MIKELPAGVAKVLKRLHHPLDVILLCVRWYVAYSLSLRDLEEMMAERGLAVDHSMVHRWVIKLLPLFEKAFRRHKRSVSK
SWRMDETYLKVRGKWAYLYRAVDKAGNTIDFLLCARRDKVAARRYFEKAIGQNGAPDTVAIDKSAANLAALHAVNAHRET
PIRIRQRKYLNNIVEQDHRAIKRRARPMLGFKNFRCARILIGGIETMHMIAKGRCGDPKAFACPPRSNSIPWFHRPAHSS
PPASTNRPYRDRTKGAGAPAFGIQTPFDSSRGSLLLQWQARLMIFDALSPTSRFHSVPEAMHLGKVVVDRGFRRPQSSLR
VDTASYRINLAGERHVSRTHQ

Sequences:

>Translated_341_residues
MIKELPAGVAKVLKRLHHPLDVILLCVRWYVAYSLSLRDLEEMMAERGLAVDHSMVHRWVIKLLPLFEKAFRRHKRSVSK
SWRMDETYLKVRGKWAYLYRAVDKAGNTIDFLLCARRDKVAARRYFEKAIGQNGAPDTVAIDKSAANLAALHAVNAHRET
PIRIRQRKYLNNIVEQDHRAIKRRARPMLGFKNFRCARILIGGIETMHMIAKGRCGDPKAFACPPRSNSIPWFHRPAHSS
PPASTNRPYRDRTKGAGAPAFGIQTPFDSSRGSLLLQWQARLMIFDALSPTSRFHSVPEAMHLGKVVVDRGFRRPQSSLR
VDTASYRINLAGERHVSRTHQ
>Mature_341_residues
MIKELPAGVAKVLKRLHHPLDVILLCVRWYVAYSLSLRDLEEMMAERGLAVDHSMVHRWVIKLLPLFEKAFRRHKRSVSK
SWRMDETYLKVRGKWAYLYRAVDKAGNTIDFLLCARRDKVAARRYFEKAIGQNGAPDTVAIDKSAANLAALHAVNAHRET
PIRIRQRKYLNNIVEQDHRAIKRRARPMLGFKNFRCARILIGGIETMHMIAKGRCGDPKAFACPPRSNSIPWFHRPAHSS
PPASTNRPYRDRTKGAGAPAFGIQTPFDSSRGSLLLQWQARLMIFDALSPTSRFHSVPEAMHLGKVVVDRGFRRPQSSLR
VDTASYRINLAGERHVSRTHQ

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 38970; Mature: 38970

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKELPAGVAKVLKRLHHPLDVILLCVRWYVAYSLSLRDLEEMMAERGLAVDHSMVHRWV
CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH
IKLLPLFEKAFRRHKRSVSKSWRMDETYLKVRGKWAYLYRAVDKAGNTIDFLLCARRDKV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCHHHH
AARRYFEKAIGQNGAPDTVAIDKSAANLAALHAVNAHRETPIRIRQRKYLNNIVEQDHRA
HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IKRRARPMLGFKNFRCARILIGGIETMHMIAKGRCGDPKAFACPPRSNSIPWFHRPAHSS
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCC
PPASTNRPYRDRTKGAGAPAFGIQTPFDSSRGSLLLQWQARLMIFDALSPTSRFHSVPEA
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHEEECCCCHHHHHCCHHH
MHLGKVVVDRGFRRPQSSLRVDTASYRINLAGERHVSRTHQ
HHHHHHHHHCCCCCCHHHHEEEEHHEEEEECCCHHHHCCCC
>Mature Secondary Structure
MIKELPAGVAKVLKRLHHPLDVILLCVRWYVAYSLSLRDLEEMMAERGLAVDHSMVHRWV
CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHH
IKLLPLFEKAFRRHKRSVSKSWRMDETYLKVRGKWAYLYRAVDKAGNTIDFLLCARRDKV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCHHHH
AARRYFEKAIGQNGAPDTVAIDKSAANLAALHAVNAHRETPIRIRQRKYLNNIVEQDHRA
HHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
IKRRARPMLGFKNFRCARILIGGIETMHMIAKGRCGDPKAFACPPRSNSIPWFHRPAHSS
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCC
PPASTNRPYRDRTKGAGAPAFGIQTPFDSSRGSLLLQWQARLMIFDALSPTSRFHSVPEA
CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHEEECCCCHHHHHCCHHH
MHLGKVVVDRGFRRPQSSLRVDTASYRINLAGERHVSRTHQ
HHHHHHHHHCCCCCCHHHHEEEEHHEEEEECCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]