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The map label for this gene is kefA [C]

Identifier: 94310588

GI number: 94310588

Start: 1780504

End: 1782177

Strand: Direct

Name: kefA [C]

Synonym: Rmet_1646

Alternate gene names: 94310588

Gene position: 1780504-1782177 (Clockwise)

Preceding gene: 94310580

Following gene: 94310591

Centisome position: 45.33

GC content: 65.47

Gene sequence:

>1674_bases
ATGGAGATGATGGATTCACTGATACCACGGGGAGTGAAGCGAAGCAGCGGCGGCAGGGTGCCCGTCGCGCTATGGATCGC
GCTGCTGTGGTGGCTGACCATGCCTTTCGCCACGTGGGCTGCCGAGGCGTCCACGTCACCTGCGGCGCCGCCCGCTGATC
TGGTGCTGATGAACCTGCCGGTGGTGACGCTACGCGCGGAACTTGGTGGCACGCCACCCGCGGTGCGGGTCGCCCGCGCG
CAGGAGCGGTTCGACAAGCTTGACCGGCGCGAGCTCGGCGAACCCGTGACCCAATTGCCGGGCCGACTGGGCAACGTGTC
CGGCGTGGCAGTGCAGGTCGGTAACCGCATCCTGTTTTCGGTCGTCGATGGCGACCTGGACCCCGAACAGCCAGGGCAGA
CCGTGGAGTCCGTGGCTGCCACGGCCGCCGCGCAACTCCAGACTGCGCTCGATGCCCGCCGCGACCAGTTGCACTGGCCC
ACCATACTGCGTGGCACAAGCTACTCGCTGGCTGCGTTGCTGCTCCTGCTCGGCCTGTTGTGGTCCATCGCGCGCGGCCG
TCGTCGCCTCGATCTGATGCTCCGCCGCGCGCTGGAATCACGCTTGCGCACACGGACGTCGGGTCGTTTCGACTGGTCCG
GCGCGCTGCTGCAGCTTGCCAACAGCATCGCGCAGATCGTCGGCGCGGCGCTGATCGCGCTACTCATCTTCCTGTGGCTC
GATTTCGCGCTCGAACAGTTCCCGCTGACCCGGCCGCTGGGCCAGCGCATGGGGGCGTTCCTGCTCGGCCTGCTGGGGCA
TGTCGGCACGTCCATGCTAGACGCCGTCCCGGGGCTGGTGACCGTGGCGGTCATCCTGCTTATCACACGTGCCGTGCACA
AGCTGGTAGCCGCGATCTTTATTGCGGTGCAGCGGGGCCAGGTCACGGTGCCCGGCATGCACCCGGAAACCGCCGGCGCT
ACGCGGCGCATCGCGTCGACCGTGGTCTGGGCGCTGGGGCTGACGTTTGCATACCCGTACATTCCGGGCTCGCAGAGCGA
TGTATTCAAGGGCCTTTCGGTGCTGTTCGGGTTCATGGTGACGCTGGGATCGGCAAATATCGTCAACCAGATCATGAGCG
GCATGGTGCTGGTGTATTCACGCGCGCTCCGGCGCGGCGACATGGTCGATATCGGCGGCACGATCGGCACAGTGACGTCA
CTGGATTCGCTGTCGGTCAAGATCGTCAACGTGCGGCGAGAGGAAGTGACGCTGCCGAACGCGGTGGTGGTCGGCAGCGC
GATTCACAATTACTCTCGCCGGGGTGGTTCGGAAGCGAATGTGGGCGCGCTGGTCTCCACGTCGGTCACCATCGGCTATG
ACGCGCCATGGCGCCAGATTCACGGCATGTTGATCCGCGCGGCCGCCACCGTGCCGGGGCTTGGCAACAATCCGCCCCCT
TACGTGCTTCAGCGTGGTCTGCAGGACTTCTACGTCGAATACGAACTGTTTTGCTCGATTGACGACCCACGGCGGCGCTT
CGAGCTTCTATCGGTCCTGCACGCGGCGATCCAGGACGAATTCAACCGCAACGGGGTACAGATCATGTCCCCGCACTACA
TGGACCAGCCCGTCGCTCCGGTGGTGGTATCGCCAGACAATCAGTACGCGGCGCCAGGCGCGGAGAAGACGTAG

Upstream 100 bases:

>100_bases
TAGCGGACGGACCGAACTTAAATCACAACACGAATGATTTCACTTGCCTGAGGCGCCAAACGTGGGTGATATCGGCGATT
GTGAACGGCTAGGCGGATGC

Downstream 100 bases:

>100_bases
CCGTAGTCACTCAGCCCGTCAGCGCGGGGATTTCAGCAAGGCGCCATGGAACACGACTGGCCCGCTCGGCCCATCCGGAT
TGGTGGACCCGCCGAGTGGC

Product: putative mechanosensitive ion channel

Products: NA

Alternate protein names: Mechanosensitive Ion Channel Family Protein; Mechanosensitive Ion Channel MscS; Transporter MscS Family; Mechanosensitive Ion Channel Protein MscS; Mechano-Sensitive Channel; Small-Conductance Mechanosensitive Channel; Mechanosensitive Ion Channel; Ion Mechanosensitive Channel; Transmembrane Protein; Mechanosensitive Ion Channel MscS Family; Small-Conductance Mechanosensitive Channel MscS; Mechano-Sensitive Ion Channel; Mechanosensitive Ion Channel Protein; Conserved Protein; Mechanosensitive Channel Protein; Small-Conductance Mechanosensitive Channel-Like; Potassium Efflux System KEFA; Transport Channel Protein; Small Conductance Mechanosensitive Ion Channel

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MEMMDSLIPRGVKRSSGGRVPVALWIALLWWLTMPFATWAAEASTSPAAPPADLVLMNLPVVTLRAELGGTPPAVRVARA
QERFDKLDRRELGEPVTQLPGRLGNVSGVAVQVGNRILFSVVDGDLDPEQPGQTVESVAATAAAQLQTALDARRDQLHWP
TILRGTSYSLAALLLLLGLLWSIARGRRRLDLMLRRALESRLRTRTSGRFDWSGALLQLANSIAQIVGAALIALLIFLWL
DFALEQFPLTRPLGQRMGAFLLGLLGHVGTSMLDAVPGLVTVAVILLITRAVHKLVAAIFIAVQRGQVTVPGMHPETAGA
TRRIASTVVWALGLTFAYPYIPGSQSDVFKGLSVLFGFMVTLGSANIVNQIMSGMVLVYSRALRRGDMVDIGGTIGTVTS
LDSLSVKIVNVRREEVTLPNAVVVGSAIHNYSRRGGSEANVGALVSTSVTIGYDAPWRQIHGMLIRAAATVPGLGNNPPP
YVLQRGLQDFYVEYELFCSIDDPRRRFELLSVLHAAIQDEFNRNGVQIMSPHYMDQPVAPVVVSPDNQYAAPGAEKT

Sequences:

>Translated_557_residues
MEMMDSLIPRGVKRSSGGRVPVALWIALLWWLTMPFATWAAEASTSPAAPPADLVLMNLPVVTLRAELGGTPPAVRVARA
QERFDKLDRRELGEPVTQLPGRLGNVSGVAVQVGNRILFSVVDGDLDPEQPGQTVESVAATAAAQLQTALDARRDQLHWP
TILRGTSYSLAALLLLLGLLWSIARGRRRLDLMLRRALESRLRTRTSGRFDWSGALLQLANSIAQIVGAALIALLIFLWL
DFALEQFPLTRPLGQRMGAFLLGLLGHVGTSMLDAVPGLVTVAVILLITRAVHKLVAAIFIAVQRGQVTVPGMHPETAGA
TRRIASTVVWALGLTFAYPYIPGSQSDVFKGLSVLFGFMVTLGSANIVNQIMSGMVLVYSRALRRGDMVDIGGTIGTVTS
LDSLSVKIVNVRREEVTLPNAVVVGSAIHNYSRRGGSEANVGALVSTSVTIGYDAPWRQIHGMLIRAAATVPGLGNNPPP
YVLQRGLQDFYVEYELFCSIDDPRRRFELLSVLHAAIQDEFNRNGVQIMSPHYMDQPVAPVVVSPDNQYAAPGAEKT
>Mature_557_residues
MEMMDSLIPRGVKRSSGGRVPVALWIALLWWLTMPFATWAAEASTSPAAPPADLVLMNLPVVTLRAELGGTPPAVRVARA
QERFDKLDRRELGEPVTQLPGRLGNVSGVAVQVGNRILFSVVDGDLDPEQPGQTVESVAATAAAQLQTALDARRDQLHWP
TILRGTSYSLAALLLLLGLLWSIARGRRRLDLMLRRALESRLRTRTSGRFDWSGALLQLANSIAQIVGAALIALLIFLWL
DFALEQFPLTRPLGQRMGAFLLGLLGHVGTSMLDAVPGLVTVAVILLITRAVHKLVAAIFIAVQRGQVTVPGMHPETAGA
TRRIASTVVWALGLTFAYPYIPGSQSDVFKGLSVLFGFMVTLGSANIVNQIMSGMVLVYSRALRRGDMVDIGGTIGTVTS
LDSLSVKIVNVRREEVTLPNAVVVGSAIHNYSRRGGSEANVGALVSTSVTIGYDAPWRQIHGMLIRAAATVPGLGNNPPP
YVLQRGLQDFYVEYELFCSIDDPRRRFELLSVLHAAIQDEFNRNGVQIMSPHYMDQPVAPVVVSPDNQYAAPGAEKT

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60236; Mature: 60236

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMMDSLIPRGVKRSSGGRVPVALWIALLWWLTMPFATWAAEASTSPAAPPADLVLMNLP
CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
VVTLRAELGGTPPAVRVARAQERFDKLDRRELGEPVTQLPGRLGNVSGVAVQVGNRILFS
CEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHEEECCCEEEEE
VVDGDLDPEQPGQTVESVAATAAAQLQTALDARRDQLHWPTILRGTSYSLAALLLLLGLL
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHH
WSIARGRRRLDLMLRRALESRLRTRTSGRFDWSGALLQLANSIAQIVGAALIALLIFLWL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFALEQFPLTRPLGQRMGAFLLGLLGHVGTSMLDAVPGLVTVAVILLITRAVHKLVAAIF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVQRGQVTVPGMHPETAGATRRIASTVVWALGLTFAYPYIPGSQSDVFKGLSVLFGFMV
HHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
TLGSANIVNQIMSGMVLVYSRALRRGDMVDIGGTIGTVTSLDSLSVKIVNVRREEVTLPN
HHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCCCEEEEEEECHHHCCCCC
AVVVGSAIHNYSRRGGSEANVGALVSTSVTIGYDAPWRQIHGMLIRAAATVPGLGNNPPP
HHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCH
YVLQRGLQDFYVEYELFCSIDDPRRRFELLSVLHAAIQDEFNRNGVQIMSPHYMDQPVAP
HHHHHHHHHHHEEHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC
VVVSPDNQYAAPGAEKT
EEECCCCCCCCCCCCCC
>Mature Secondary Structure
MEMMDSLIPRGVKRSSGGRVPVALWIALLWWLTMPFATWAAEASTSPAAPPADLVLMNLP
CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
VVTLRAELGGTPPAVRVARAQERFDKLDRRELGEPVTQLPGRLGNVSGVAVQVGNRILFS
CEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHEEECCCEEEEE
VVDGDLDPEQPGQTVESVAATAAAQLQTALDARRDQLHWPTILRGTSYSLAALLLLLGLL
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHH
WSIARGRRRLDLMLRRALESRLRTRTSGRFDWSGALLQLANSIAQIVGAALIALLIFLWL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DFALEQFPLTRPLGQRMGAFLLGLLGHVGTSMLDAVPGLVTVAVILLITRAVHKLVAAIF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAVQRGQVTVPGMHPETAGATRRIASTVVWALGLTFAYPYIPGSQSDVFKGLSVLFGFMV
HHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
TLGSANIVNQIMSGMVLVYSRALRRGDMVDIGGTIGTVTSLDSLSVKIVNVRREEVTLPN
HHCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCCCEEEEEEECHHHCCCCC
AVVVGSAIHNYSRRGGSEANVGALVSTSVTIGYDAPWRQIHGMLIRAAATVPGLGNNPPP
HHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCH
YVLQRGLQDFYVEYELFCSIDDPRRRFELLSVLHAAIQDEFNRNGVQIMSPHYMDQPVAP
HHHHHHHHHHHEEHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC
VVVSPDNQYAAPGAEKT
EEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA