| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is bug
Identifier: 94310577
GI number: 94310577
Start: 1763640
End: 1764641
Strand: Reverse
Name: bug
Synonym: Rmet_1635
Alternate gene names: NA
Gene position: 1764641-1763640 (Counterclockwise)
Preceding gene: 94310579
Following gene: 94310576
Centisome position: 44.92
GC content: 64.57
Gene sequence:
>1002_bases ATGTTTTTCACCCATCGTCGGATGCGGCCCATGCTGGCCGTGCTTTGTGCCGGATGCATGACCATCGCCACGCAGGCCGG CGCGCAGTCTGCCGATCACTGGCCCAGCAAGCCCATCACCTACGTGGTGCCATTCGCGGCGGGCGGCACTACCGATCTGC TGGGCCGCCTGATCGGGCAGCGCCTGTCGCAGACGCTGGGCCAGTCGATCGTGGTGGAAAACCGCGCGGGCGCGGGCGGC AACATCGGCTCGGACTACGTGGCCAAGGCCGCCCCCGATGGCTATACCCTGCTCGGCGGCACGATCAGCTCCCACGCGAT CAATATCAGCCTGTATCCGAAGATGCCGTATGACCCGGTCAAGAACTTCCAGCCTGTGGCACTGATCGGCACCCTGCCGA ACGTGCTGGTGGTCAATGCCAACAGCCCATGGAAGAGCGTGCAGGACGTGATCGCCGCGGCCAAGGCCAAGCCGGGCTCG GTCAACTTCGGGTCGTCGGGCAACGGCACGTCGCAGCATCTGGCAGCCGAACTGTTCGCCAACATGGCCGGGCTGCGCAT GACCCATGTTCCCTACAAAGGCAGCAGCCAGGCTGTGCAGGCGCTGCTGGGCAACCAGGTCGACATCGTGTTCGAGAACA GCGTGGCGGCGATGCCGATGATCCAGGCCGGCAAGTTCCGCGCGCTGGCCACGACTGGCGCAAAGCGCGCGCCGGAACTG CCCGACGTGCCGACCATGGCCGAGTCCGCCCCCGGCCTGTCCGGCTATGAAATCGTGTCATGGCAGGCGATCTTCGCGCC GGCTGGCACACCGATGCCGATCATCAACAAGCTCTCCGGCGAGATCGGCAAGATCATTCGCCAGCCCGATGTGCGCAGCA AGCTGGCAGCGATGGGCATCGAACCCTCGGGCGCCGGCCCCACCGAACTGGGCAACTTCCAGAAAAGCGAAGTTGCCAAA TGGGCAAACCTGATCAAGGTGGCCAATATTCACCTGGAGTAA
Upstream 100 bases:
>100_bases GGATCTGCCCACGGAACCGACAGGCAGAACAAGAAGAAAACACAGCGAATATCGTACCGCAACGCCGTACTCACCCGTTC GCGTAACAGGAGACAACGCA
Downstream 100 bases:
>100_bases GCATGAGTGAACACCGTATTCCGACCGCCGGCCTGCATCAGTGGGTGGTCGATCTCTGGCTGGCGGCAGGCTCCGATGCC CGCGAGGCCCGGCTGACCGC
Product: extra-cytoplasmic Solute Receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MFFTHRRMRPMLAVLCAGCMTIATQAGAQSADHWPSKPITYVVPFAAGGTTDLLGRLIGQRLSQTLGQSIVVENRAGAGG NIGSDYVAKAAPDGYTLLGGTISSHAINISLYPKMPYDPVKNFQPVALIGTLPNVLVVNANSPWKSVQDVIAAAKAKPGS VNFGSSGNGTSQHLAAELFANMAGLRMTHVPYKGSSQAVQALLGNQVDIVFENSVAAMPMIQAGKFRALATTGAKRAPEL PDVPTMAESAPGLSGYEIVSWQAIFAPAGTPMPIINKLSGEIGKIIRQPDVRSKLAAMGIEPSGAGPTELGNFQKSEVAK WANLIKVANIHLE
Sequences:
>Translated_333_residues MFFTHRRMRPMLAVLCAGCMTIATQAGAQSADHWPSKPITYVVPFAAGGTTDLLGRLIGQRLSQTLGQSIVVENRAGAGG NIGSDYVAKAAPDGYTLLGGTISSHAINISLYPKMPYDPVKNFQPVALIGTLPNVLVVNANSPWKSVQDVIAAAKAKPGS VNFGSSGNGTSQHLAAELFANMAGLRMTHVPYKGSSQAVQALLGNQVDIVFENSVAAMPMIQAGKFRALATTGAKRAPEL PDVPTMAESAPGLSGYEIVSWQAIFAPAGTPMPIINKLSGEIGKIIRQPDVRSKLAAMGIEPSGAGPTELGNFQKSEVAK WANLIKVANIHLE >Mature_333_residues MFFTHRRMRPMLAVLCAGCMTIATQAGAQSADHWPSKPITYVVPFAAGGTTDLLGRLIGQRLSQTLGQSIVVENRAGAGG NIGSDYVAKAAPDGYTLLGGTISSHAINISLYPKMPYDPVKNFQPVALIGTLPNVLVVNANSPWKSVQDVIAAAKAKPGS VNFGSSGNGTSQHLAAELFANMAGLRMTHVPYKGSSQAVQALLGNQVDIVFENSVAAMPMIQAGKFRALATTGAKRAPEL PDVPTMAESAPGLSGYEIVSWQAIFAPAGTPMPIINKLSGEIGKIIRQPDVRSKLAAMGIEPSGAGPTELGNFQKSEVAK WANLIKVANIHLE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34914; Mature: 34914
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFTHRRMRPMLAVLCAGCMTIATQAGAQSADHWPSKPITYVVPFAAGGTTDLLGRLIGQ CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH RLSQTLGQSIVVENRAGAGGNIGSDYVAKAAPDGYTLLGGTISSHAINISLYPKMPYDPV HHHHHHCCEEEEECCCCCCCCCCCHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCCCHH KNFQPVALIGTLPNVLVVNANSPWKSVQDVIAAAKAKPGSVNFGSSGNGTSQHLAAELFA CCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH NMAGLRMTHVPYKGSSQAVQALLGNQVDIVFENSVAAMPMIQAGKFRALATTGAKRAPEL HHHCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCHHCCHHCCCCEEEEECCCCCCCCCC PDVPTMAESAPGLSGYEIVSWQAIFAPAGTPMPIINKLSGEIGKIIRQPDVRSKLAAMGI CCCCCHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCC EPSGAGPTELGNFQKSEVAKWANLIKVANIHLE CCCCCCCHHHCCCCHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MFFTHRRMRPMLAVLCAGCMTIATQAGAQSADHWPSKPITYVVPFAAGGTTDLLGRLIGQ CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH RLSQTLGQSIVVENRAGAGGNIGSDYVAKAAPDGYTLLGGTISSHAINISLYPKMPYDPV HHHHHHCCEEEEECCCCCCCCCCCHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCCCHH KNFQPVALIGTLPNVLVVNANSPWKSVQDVIAAAKAKPGSVNFGSSGNGTSQHLAAELFA CCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH NMAGLRMTHVPYKGSSQAVQALLGNQVDIVFENSVAAMPMIQAGKFRALATTGAKRAPEL HHHCCEEEECCCCCCHHHHHHHHCCCEEEEECCCCHHCCHHCCCCEEEEECCCCCCCCCC PDVPTMAESAPGLSGYEIVSWQAIFAPAGTPMPIINKLSGEIGKIIRQPDVRSKLAAMGI CCCCCHHHCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCC EPSGAGPTELGNFQKSEVAKWANLIKVANIHLE CCCCCCCHHHCCCCHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]