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The map label for this gene is trbL

Identifier: 94310498

GI number: 94310498

Start: 1677817

End: 1679202

Strand: Direct

Name: trbL

Synonym: Rmet_1556

Alternate gene names: NA

Gene position: 1677817-1679202 (Clockwise)

Preceding gene: 94310497

Following gene: 94310499

Centisome position: 42.71

GC content: 68.11

Gene sequence:

>1386_bases
ATGAATGACGTGACCATCATCGACCAGTTCCTGAACACCTTTTCCACCTACATCGACTCGGGTTTCGGGCTGCTGCGGGG
CGAAGTGGCGTTCCTCACGGCCACGCTGATCGTCATCGACATGACGATCGCCGGCCTGTATTGGGCCATGAGCCATGCCA
CCGGCCAGGGCGAGGACGTGATCGCCAAGCTGCTGCGCAAGGTGCTCTACGTCGGTGCCTTCGCCTACATCATCAACAAC
TTCAACTGGCTGGCCGGCATCGTCTTCCGATCCTTTGCCGGACTGGGCATCACCGCCACCGGCTCGGCCATCACGATGGG
GAACTTCTTGCAGCCGGGCCGGTTGGCGAAAGCCGGCATCGACGCCGGGGCGCCGATCCTGAAGCAGATCGGCAAGATGG
CGGGCTTCCCCGAAGTGTTCGTGAACCTCGACCCCATCGTGGTGATGTTCCTCGCCTGGCTGGTTGTGGTGTTGTGCTTC
TTCGTGCTGGCGATCCAGCTTTTCATCACGCTGATCGAATTCAAGCTGACCACGCTGGCGGGCTTCGTGCTGGTGCCGTT
CGCGCTGTGGAACAAGACCAGCTTCCTGGCCGAGAAGGTGCTGGGCAACGTGGTATCCGCCGGCGTCAAGGTGCTGGTGC
TGGCCGTGATCGTCGGTATCGGCTCGGGCTTGTTCGCTCAGTTCCAAGTCCATCCCGCCGAGCCGTCCATCGACCATGCG
CTGGTCATCATGCTGGCCTCGCTCACCTTGCTGGCGCTTGGGATCTTCGGCCCCGGCATCGCCACGGGCCTCGTCTCCGG
TGCGCCACAGCTCGGCGCGGGCGCAATGGCCGGTGCTGCTGTCGGCGCTGCCGGCACCGCCGTCGCCATCGGCGCCGCCG
CGACGGGCGTGGGTGGCGCCGTGGCTGCTGGCGCTCGCATGGCCCCGGCTGCCGCCAAGCTGGCCGGTAGCGGCGCGCGC
GCCGCCACGTCGGCGGCCAGCAGTGCGAAGTCGGCGTTTCAGGCCGGTTCCGCCGCCGCTGGCGGCGGCGCGAAGGGCGC
GATGGCGGGCCTGGGCAATGTCGCCAAGACAGGCGCGCAGTCGGCCGGACGCGCGGCTGTGTCGCGTGCTTCCGCTGCCG
GGCAGCGAATGGCAGCTCCATTCCGCGCTGGCTGGAATGGCCCGGCCGCTGACTCTGGCGCGACAGCCGGCGGAGCCGGG
GCATCCGGCCAGGCCGCAACAGGCGAAGCCACTTCCGGCGCAGCCAACGCGCAACCCGCCTGGGCCAAGCGGCTGCATCG
CCGCCAGCAACTCACCCATGCCGCGACCACCACCGCCCACACGCTGCGCGGTGGCGATGGCGGCGGCTCCGGCCAGGGGC
CGAGCCTGCGCGATTCCGATTCATAA

Upstream 100 bases:

>100_bases
AGTACCAGACGGCGGCCGACCTGCCGCCGATCCCGCCGAGCTTCGATGAACCGGCCGATGGCGTGGCGCCAGCCGTTCCC
GCCCAACGGGAGGACACGCC

Downstream 100 bases:

>100_bases
GGAGAACTGACCATGCGATTCAAGAAACCACAGGTGCGCTATGCCGACACGCCGCAGGCTGCCACGCCTTATCAAGCTGC
CGGCCAGGTGTGGGACGAGC

Product: conjugal transfer protein TrbL

Products: NA

Alternate protein names: P-Type Conjugative Transfer Protein TrbL; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Conjugal Transfer Protein; P-Type Conjugative Transfer Protein Trbl; Conjugal Transfer Protein Trbl; Type IV Secretory Pathway TrbL Component; Type IV Secretion System Protein; Plasmid Conjugal Transfer Protein; Conjugative Transfer Protein TrbL; Type IV Secretory Pathway TrbL-Like Protein

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MNDVTIIDQFLNTFSTYIDSGFGLLRGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDVIAKLLRKVLYVGAFAYIINN
FNWLAGIVFRSFAGLGITATGSAITMGNFLQPGRLAKAGIDAGAPILKQIGKMAGFPEVFVNLDPIVVMFLAWLVVVLCF
FVLAIQLFITLIEFKLTTLAGFVLVPFALWNKTSFLAEKVLGNVVSAGVKVLVLAVIVGIGSGLFAQFQVHPAEPSIDHA
LVIMLASLTLLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAAGTAVAIGAAATGVGGAVAAGARMAPAAAKLAGSGAR
AATSAASSAKSAFQAGSAAAGGGAKGAMAGLGNVAKTGAQSAGRAAVSRASAAGQRMAAPFRAGWNGPAADSGATAGGAG
ASGQAATGEATSGAANAQPAWAKRLHRRQQLTHAATTTAHTLRGGDGGGSGQGPSLRDSDS

Sequences:

>Translated_461_residues
MNDVTIIDQFLNTFSTYIDSGFGLLRGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDVIAKLLRKVLYVGAFAYIINN
FNWLAGIVFRSFAGLGITATGSAITMGNFLQPGRLAKAGIDAGAPILKQIGKMAGFPEVFVNLDPIVVMFLAWLVVVLCF
FVLAIQLFITLIEFKLTTLAGFVLVPFALWNKTSFLAEKVLGNVVSAGVKVLVLAVIVGIGSGLFAQFQVHPAEPSIDHA
LVIMLASLTLLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAAGTAVAIGAAATGVGGAVAAGARMAPAAAKLAGSGAR
AATSAASSAKSAFQAGSAAAGGGAKGAMAGLGNVAKTGAQSAGRAAVSRASAAGQRMAAPFRAGWNGPAADSGATAGGAG
ASGQAATGEATSGAANAQPAWAKRLHRRQQLTHAATTTAHTLRGGDGGGSGQGPSLRDSDS
>Mature_461_residues
MNDVTIIDQFLNTFSTYIDSGFGLLRGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDVIAKLLRKVLYVGAFAYIINN
FNWLAGIVFRSFAGLGITATGSAITMGNFLQPGRLAKAGIDAGAPILKQIGKMAGFPEVFVNLDPIVVMFLAWLVVVLCF
FVLAIQLFITLIEFKLTTLAGFVLVPFALWNKTSFLAEKVLGNVVSAGVKVLVLAVIVGIGSGLFAQFQVHPAEPSIDHA
LVIMLASLTLLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAAGTAVAIGAAATGVGGAVAAGARMAPAAAKLAGSGAR
AATSAASSAKSAFQAGSAAAGGGAKGAMAGLGNVAKTGAQSAGRAAVSRASAAGQRMAAPFRAGWNGPAADSGATAGGAG
ASGQAATGEATSGAANAQPAWAKRLHRRQQLTHAATTTAHTLRGGDGGGSGQGPSLRDSDS

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45811; Mature: 45811

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDVTIIDQFLNTFSTYIDSGFGLLRGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDV
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IAKLLRKVLYVGAFAYIINNFNWLAGIVFRSFAGLGITATGSAITMGNFLQPGRLAKAGI
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCCHHHHCCC
DAGAPILKQIGKMAGFPEVFVNLDPIVVMFLAWLVVVLCFFVLAIQLFITLIEFKLTTLA
CCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVLVPFALWNKTSFLAEKVLGNVVSAGVKVLVLAVIVGIGSGLFAQFQVHPAEPSIDHA
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH
LVIMLASLTLLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAAGTAVAIGAAATGVGGA
HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHH
VAAGARMAPAAAKLAGSGARAATSAASSAKSAFQAGSAAAGGGAKGAMAGLGNVAKTGAQ
HHCCCHHCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHCHH
SAGRAAVSRASAAGQRMAAPFRAGWNGPAADSGATAGGAGASGQAATGEATSGAANAQPA
HHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
WAKRLHRRQQLTHAATTTAHTLRGGDGGGSGQGPSLRDSDS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNDVTIIDQFLNTFSTYIDSGFGLLRGEVAFLTATLIVIDMTIAGLYWAMSHATGQGEDV
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IAKLLRKVLYVGAFAYIINNFNWLAGIVFRSFAGLGITATGSAITMGNFLQPGRLAKAGI
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCCHHHHCCC
DAGAPILKQIGKMAGFPEVFVNLDPIVVMFLAWLVVVLCFFVLAIQLFITLIEFKLTTLA
CCCCHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFVLVPFALWNKTSFLAEKVLGNVVSAGVKVLVLAVIVGIGSGLFAQFQVHPAEPSIDHA
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHH
LVIMLASLTLLALGIFGPGIATGLVSGAPQLGAGAMAGAAVGAAGTAVAIGAAATGVGGA
HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHH
VAAGARMAPAAAKLAGSGARAATSAASSAKSAFQAGSAAAGGGAKGAMAGLGNVAKTGAQ
HHCCCHHCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHCHH
SAGRAAVSRASAAGQRMAAPFRAGWNGPAADSGATAGGAGASGQAATGEATSGAANAQPA
HHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
WAKRLHRRQQLTHAATTTAHTLRGGDGGGSGQGPSLRDSDS
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA