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The map label for this gene is repA

Identifier: 94310427

GI number: 94310427

Start: 1604819

End: 1605688

Strand: Direct

Name: repA

Synonym: Rmet_1485

Alternate gene names: NA

Gene position: 1604819-1605688 (Clockwise)

Preceding gene: 94310426

Following gene: 94310428

Centisome position: 40.85

GC content: 67.24

Gene sequence:

>870_bases
ATGGCCTTCGCCATGTCCAGCCCTGCGCTGCCATCCCGGCAGCGGCCGTTGCAGGAGCGCGAACAGCTCGACCTGTTCCG
CGCCTTGCCCGGCGACATGGCGCCGCGCGACAGCCAGGACTTGATGGCCTATCCGTTCTTCTCGCTCGGCAAGTCCAAGC
GGGTCAAGCCCATCGACTTCCGCGCGGGCAACGTCACGATCCGCGTGGAAGGCACACAGGAGCACGGCATCGCCACGATT
TGGGATGCGGACGTGCTGATATGGGCGGCCTCGCAGATCGTGGAGGCGAAGGACGCAGGCTTGCGCCCATCGCGGCTGAT
GCGCGCCACGCCCTACGAGATCCTGCGCTTCATCGGGCGCGGCAAGTCGCTGCGCGACTACCAGCGCCTCAAGGCCGCAC
TCGACCGGCTGCAATCGACCACGGTGGCCACGTCCATCCGCGAGACGACCGGGCGGCGCCTGCACCGTTTCTCATGGATC
AACGAATGGAAGGAACTGGCCGATGCCAGCGGCACGCCGCTGGGCATCGAGCTGATCCTGCCGGACTGGTTCTATGCGGG
CGTGCTCGACGCGGCCCTGGTGCTGACCATCGACCCGGCATATTTCCGGCTGACTGGCGGCATCGAGCGGTGGCTGTACC
GGCTGGTGCGCAAGCACGGCGGCAAGCAGGCATACGGCTGGCAGTTCGACTTTCGCTACCTGCACCAGAAATCGGGCAGC
ACCGCCAAGCCCTACGAGTTCGCTTGCGACCTGCGCGCGCTGGTCGCGCGGCAGTCGCTGCCCGGCTACGTCCTGGGCAT
CGAGCGGATGCCGGACAGCGGCATGGAGCTGCTGACGTTCCGGCCCGTGCCGCATACGGCACGGGGATAA

Upstream 100 bases:

>100_bases
ATGCCTGGGCCGCCGAGCGCAGCTTCGAGAGCACATCCGATCCCGAATACGCCGAGCAGCATTCGGCGGACAGCCGTGCG
CGCTGATCGCTTGCGCGCGG

Downstream 100 bases:

>100_bases
CTCCGGGAAAGCCTGTGGATGGTGTCGTGCTATCAGGCGTGCGGGGTATCGTGCTATCAGGCGTGGGACTATCGTGCTAT
CAGGCGTGCCGATCGGCCGA

Product: replication initiation protein CMGI-3 (GI family Tn4371)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MAFAMSSPALPSRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLGKSKRVKPIDFRAGNVTIRVEGTQEHGIATI
WDADVLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSLRDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWI
NEWKELADASGTPLGIELILPDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGS
TAKPYEFACDLRALVARQSLPGYVLGIERMPDSGMELLTFRPVPHTARG

Sequences:

>Translated_289_residues
MAFAMSSPALPSRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLGKSKRVKPIDFRAGNVTIRVEGTQEHGIATI
WDADVLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSLRDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWI
NEWKELADASGTPLGIELILPDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGS
TAKPYEFACDLRALVARQSLPGYVLGIERMPDSGMELLTFRPVPHTARG
>Mature_288_residues
AFAMSSPALPSRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLGKSKRVKPIDFRAGNVTIRVEGTQEHGIATIW
DADVLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGRGKSLRDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWIN
EWKELADASGTPLGIELILPDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGST
AKPYEFACDLRALVARQSLPGYVLGIERMPDSGMELLTFRPVPHTARG

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 32785; Mature: 32654

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFAMSSPALPSRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLGKSKRVKPIDF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHCCCCCCCCCEEE
RAGNVTIRVEGTQEHGIATIWDADVLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGR
ECCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHC
GKSLRDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWKELADASGTPLGIELIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
PDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGS
CCHHHHHHHHHEEEEEECCHHEEECCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCC
TAKPYEFACDLRALVARQSLPGYVLGIERMPDSGMELLTFRPVPHTARG
CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
AFAMSSPALPSRQRPLQEREQLDLFRALPGDMAPRDSQDLMAYPFFSLGKSKRVKPIDF
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHCCCCCCCCCEEE
RAGNVTIRVEGTQEHGIATIWDADVLIWAASQIVEAKDAGLRPSRLMRATPYEILRFIGR
ECCEEEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHC
GKSLRDYQRLKAALDRLQSTTVATSIRETTGRRLHRFSWINEWKELADASGTPLGIELIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
PDWFYAGVLDAALVLTIDPAYFRLTGGIERWLYRLVRKHGGKQAYGWQFDFRYLHQKSGS
CCHHHHHHHHHEEEEEECCHHEEECCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCC
TAKPYEFACDLRALVARQSLPGYVLGIERMPDSGMELLTFRPVPHTARG
CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]