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The map label for this gene is dppA [H]

Identifier: 94310354

GI number: 94310354

Start: 1525561

End: 1526388

Strand: Direct

Name: dppA [H]

Synonym: Rmet_1412

Alternate gene names: 94310354

Gene position: 1525561-1526388 (Clockwise)

Preceding gene: 94310353

Following gene: 94310355

Centisome position: 38.84

GC content: 66.06

Gene sequence:

>828_bases
ATGAAGATTCTGGTTTCCACGGACATCGAAGGCGTGGCCGGCGTATTCCACGCCGAGCAAACACGCGCGGGGAATGGAGA
GTACGAACGCGCGCGTGCCTGGATGACGGCCGAAGCCAATGCCGCCGTGCAGGGCGCATTTGCGGGTGGCGCCACCGAGG
TGTTGGTCAACGATTCGCACGGGGGCTTCCGCAACCTGCTGCCGGATCAGATCGACCCGCGCGCGCAACTGGTGCTGGGC
AAGCCGCGCTATCTGAGCATGATGGCTGGCGTCGAGCAGGATTGCGACGGCGTGTTCATGATCGGCTATCACGGCCGGGC
GCAGAGCCGTGGCGTGCTGGCCCATACGATCAACAGCGGCGCGTTCGCGCGCGTCTGGCTCAACGGGCTGGAGCTGGGCG
AGGCGGGCATCTACGCCGCATTGGCCGGCGAGTTCGGCGTGCCGGTGATGCTGGCCAGCGGCGATGACGTCTTCATCGCG
GAAACGCAGCCGCTGATGCCTTGGGTGCGCTACGTGCAGACCAAGGCCGCAGGCGGGCAGGGCAGTGGCACCTCGTTGTC
GCCCGCTGCCGCTCGTGAAGCGATCGCAGTGGCCGCCGAGTCCGTGACGCGCGATGCGATCGTCCAAGCCAAGGCACGTT
GCTTCGAACTGCCTGGGCCGGTGAGTTGCCGCCTGCAGACAACGACCACCGCCCACGCCGACCTGTTCTGCCAATGGCCC
GAGTTCGAACGGGTCGACGGTGTCACGCTGACATTCACGGGGCCAACCGTGCAGGCTGTGGTGCGGATGCTGAACTGCTG
CTCGGCGATGTCGTTCATGCTGAAGTAG

Upstream 100 bases:

>100_bases
AGCAGGCCATCGTCAATGCGCTCTGGCATGGCGAAACCGTTCATGGCCGCGATGGGCACACCCGGCGGGCACTACGCGAA
CTGTTGCAGGAACTGATGGC

Downstream 100 bases:

>100_bases
TTGTTTTCCCCGTTTTCCCGCAACGCGGGAGAACGGAGCGAAAACAGTGGGACAATAGCGCCCGTTCCCGATTTCGCCCG
ACTTCCAATGACCCATCCGA

Product: D-aminopeptidase M55

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKILVSTDIEGVAGVFHAEQTRAGNGEYERARAWMTAEANAAVQGAFAGGATEVLVNDSHGGFRNLLPDQIDPRAQLVLG
KPRYLSMMAGVEQDCDGVFMIGYHGRAQSRGVLAHTINSGAFARVWLNGLELGEAGIYAALAGEFGVPVMLASGDDVFIA
ETQPLMPWVRYVQTKAAGGQGSGTSLSPAAAREAIAVAAESVTRDAIVQAKARCFELPGPVSCRLQTTTTAHADLFCQWP
EFERVDGVTLTFTGPTVQAVVRMLNCCSAMSFMLK

Sequences:

>Translated_275_residues
MKILVSTDIEGVAGVFHAEQTRAGNGEYERARAWMTAEANAAVQGAFAGGATEVLVNDSHGGFRNLLPDQIDPRAQLVLG
KPRYLSMMAGVEQDCDGVFMIGYHGRAQSRGVLAHTINSGAFARVWLNGLELGEAGIYAALAGEFGVPVMLASGDDVFIA
ETQPLMPWVRYVQTKAAGGQGSGTSLSPAAAREAIAVAAESVTRDAIVQAKARCFELPGPVSCRLQTTTTAHADLFCQWP
EFERVDGVTLTFTGPTVQAVVRMLNCCSAMSFMLK
>Mature_275_residues
MKILVSTDIEGVAGVFHAEQTRAGNGEYERARAWMTAEANAAVQGAFAGGATEVLVNDSHGGFRNLLPDQIDPRAQLVLG
KPRYLSMMAGVEQDCDGVFMIGYHGRAQSRGVLAHTINSGAFARVWLNGLELGEAGIYAALAGEFGVPVMLASGDDVFIA
ETQPLMPWVRYVQTKAAGGQGSGTSLSPAAAREAIAVAAESVTRDAIVQAKARCFELPGPVSCRLQTTTTAHADLFCQWP
EFERVDGVTLTFTGPTVQAVVRMLNCCSAMSFMLK

Specific function: Hydrolyzes N-terminal residues in D-amino acid containing peptides. Among the tested substrates, the highest activities are with D-Ala-D-Ala and D-Ala-Gly-Gly. The physiological role is not clear [H]

COG id: COG2362

COG function: function code E; D-aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M55 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007035 [H]

Pfam domain/function: PF04951 Peptidase_M55 [H]

EC number: NA

Molecular weight: Translated: 29188; Mature: 29188

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVSTDIEGVAGVFHAEQTRAGNGEYERARAWMTAEANAAVQGAFAGGATEVLVNDSH
CEEEEECCCCHHHHHHCCHHCCCCCCCHHHHHEEEEECCCCEEEEEECCCCEEEEEECCC
GGFRNLLPDQIDPRAQLVLGKPRYLSMMAGVEQDCDGVFMIGYHGRAQSRGVLAHTINSG
CCHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEECCC
AFARVWLNGLELGEAGIYAALAGEFGVPVMLASGDDVFIAETQPLMPWVRYVQTKAAGGQ
CEEEEEECCCEECCCCEEEEEECCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHCCCCC
GSGTSLSPAAAREAIAVAAESVTRDAIVQAKARCFELPGPVSCRLQTTTTAHADLFCQWP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECC
EFERVDGVTLTFTGPTVQAVVRMLNCCSAMSFMLK
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKILVSTDIEGVAGVFHAEQTRAGNGEYERARAWMTAEANAAVQGAFAGGATEVLVNDSH
CEEEEECCCCHHHHHHCCHHCCCCCCCHHHHHEEEEECCCCEEEEEECCCCEEEEEECCC
GGFRNLLPDQIDPRAQLVLGKPRYLSMMAGVEQDCDGVFMIGYHGRAQSRGVLAHTINSG
CCHHHCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEECCC
AFARVWLNGLELGEAGIYAALAGEFGVPVMLASGDDVFIAETQPLMPWVRYVQTKAAGGQ
CEEEEEECCCEECCCCEEEEEECCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHCCCCC
GSGTSLSPAAAREAIAVAAESVTRDAIVQAKARCFELPGPVSCRLQTTTTAHADLFCQWP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECC
EFERVDGVTLTFTGPTVQAVVRMLNCCSAMSFMLK
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]