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The map label for this gene is ssuD

Identifier: 94310313

GI number: 94310313

Start: 1480643

End: 1481806

Strand: Direct

Name: ssuD

Synonym: Rmet_1371

Alternate gene names: 94310313

Gene position: 1480643-1481806 (Clockwise)

Preceding gene: 94310312

Following gene: 94310314

Centisome position: 37.69

GC content: 67.7

Gene sequence:

>1164_bases
ATGCAAGTTCTCTGGTTCATTCCCACCCACGGCGACAGCCGCTACCTCGGCACGTCGGAAGGCGCGCGCGAGGTCAGCTT
CGACTATCTGAAGCAGGTCGCCGTGGCTGCCGACACGCTTGGCTATGACGGTGTGCTGATTCCCACCGGCCGCTCCTGCG
AAGACCCGTGGGTGGTGGCATCGGCCTTGGCCGCCGTCACCCGCAAGCTGCGGTTCCTGGTGGCGCTGCGTCCGGGTTTG
ATGACACCGACACTGGCCGCGCGCATGGCCGCCACGTTCGATCGCGTGTCCAACGGCCGCTTGCTCGTCAATCTGGTCAC
TGGCGGCGATGTGGCCGAACTGGAAGGCGACGGCTTGTTCCTGAACCACGCCGAACGCTATGAGGCTTCGGCGGAGTTCA
TCCGCGTGTGGCGCGACCTGCTGGCCGCCAGCCACGAGAACGGCGAGATCAGCTTCGAAGGCAAGCACGTCACGGTCAAG
GGCGCGCGCGTGCTGTACCCGCCGATTCAGCGACCGCATCCGCCGGTGTACTTCGGCGGGTCCTCCGAGGCTGCGCACGA
CCTCGCCGCCGAGCAGGTGGAGACGTACCTGACCTGGGGCGAGCCGCCCGCCGACGTCGCGAAGAAGATCGCCGACGTGC
GCGCCCGCGCCGCGAAGCACGGCCGCACGGTGCGCTTCGGCATCCGCCTGCACGTGATCGTGCGCGAGACCGACGCCGCA
GCATGGGCGGCTGCCGACGAACTGATCAGCAAGCTCGACGACCAGACCGTGGCACGCGCCCAGGCCGTGTTCGCGAAGAT
GGATTCGGAAGGGCAGCGGCGCATGGCGGCGCTGCACGCGGGTGGCACCCGTCGCACGCGTGAGGCGCTCGAGATCAGCC
CGAATCTGTGGGCGGGTGTCGGACTCGTGCGTGGCGGGGCTGGCACCGCACTGGTCGGCGATCCGAAGACCGTGGCGGCA
CGCATCGAGGAGTACGCGGCGCTGGGTATCGATACTTTCGTGCTCTCCGGCTATCCGCATCTGGAGGAGGCCTATCGTTT
TGCCGAACTCGTGTTCCCGCTGCTGCCGCGCAAGGTGCGCGACAAGTTGCCGGGGCAGGTGCTGTCCGGTCCGTTTGGTG
AAGTCATGGCCACCGGCATCGTGCCGATCGCCTCGCAAAGCTGA

Upstream 100 bases:

>100_bases
GCTGATTCCCAAACCGATCAGAGTTGCAGACGCTGCGTGGCAAGCCCCCACCACGCAACAGGCGCAGCGCTGATTTTTAT
CGACCCGCAGGAGGCACGAC

Downstream 100 bases:

>100_bases
GGGAGGCTGACCATGAGCGCGCCCCATTCCATTGCGCCACGCCGGATCGACTGGCGCCAGGCCGCCCGCGCGATTGCGCC
GTGGATCGTCCCGATCCTGC

Product: alkanesulfonate monooxygenase

Products: NA

Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MQVLWFIPTHGDSRYLGTSEGAREVSFDYLKQVAVAADTLGYDGVLIPTGRSCEDPWVVASALAAVTRKLRFLVALRPGL
MTPTLAARMAATFDRVSNGRLLVNLVTGGDVAELEGDGLFLNHAERYEASAEFIRVWRDLLAASHENGEISFEGKHVTVK
GARVLYPPIQRPHPPVYFGGSSEAAHDLAAEQVETYLTWGEPPADVAKKIADVRARAAKHGRTVRFGIRLHVIVRETDAA
AWAAADELISKLDDQTVARAQAVFAKMDSEGQRRMAALHAGGTRRTREALEISPNLWAGVGLVRGGAGTALVGDPKTVAA
RIEEYAALGIDTFVLSGYPHLEEAYRFAELVFPLLPRKVRDKLPGQVLSGPFGEVMATGIVPIASQS

Sequences:

>Translated_387_residues
MQVLWFIPTHGDSRYLGTSEGAREVSFDYLKQVAVAADTLGYDGVLIPTGRSCEDPWVVASALAAVTRKLRFLVALRPGL
MTPTLAARMAATFDRVSNGRLLVNLVTGGDVAELEGDGLFLNHAERYEASAEFIRVWRDLLAASHENGEISFEGKHVTVK
GARVLYPPIQRPHPPVYFGGSSEAAHDLAAEQVETYLTWGEPPADVAKKIADVRARAAKHGRTVRFGIRLHVIVRETDAA
AWAAADELISKLDDQTVARAQAVFAKMDSEGQRRMAALHAGGTRRTREALEISPNLWAGVGLVRGGAGTALVGDPKTVAA
RIEEYAALGIDTFVLSGYPHLEEAYRFAELVFPLLPRKVRDKLPGQVLSGPFGEVMATGIVPIASQS
>Mature_387_residues
MQVLWFIPTHGDSRYLGTSEGAREVSFDYLKQVAVAADTLGYDGVLIPTGRSCEDPWVVASALAAVTRKLRFLVALRPGL
MTPTLAARMAATFDRVSNGRLLVNLVTGGDVAELEGDGLFLNHAERYEASAEFIRVWRDLLAASHENGEISFEGKHVTVK
GARVLYPPIQRPHPPVYFGGSSEAAHDLAAEQVETYLTWGEPPADVAKKIADVRARAAKHGRTVRFGIRLHVIVRETDAA
AWAAADELISKLDDQTVARAQAVFAKMDSEGQRRMAALHAGGTRRTREALEISPNLWAGVGLVRGGAGTALVGDPKTVAA
RIEEYAALGIDTFVLSGYPHLEEAYRFAELVFPLLPRKVRDKLPGQVLSGPFGEVMATGIVPIASQS

Specific function: Catalyzes the desulfonation of aliphatic sulfonates

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SsuD family

Homologues:

Organism=Escherichia coli, GI1787166, Length=382, Percent_Identity=64.6596858638743, Blast_Score=498, Evalue=1e-142,
Organism=Escherichia coli, GI1787247, Length=385, Percent_Identity=25.7142857142857, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSUD_RALME (Q1LNM2)

Other databases:

- EMBL:   CP000352
- RefSeq:   YP_583523.1
- ProteinModelPortal:   Q1LNM2
- STRING:   Q1LNM2
- GeneID:   4038174
- GenomeReviews:   CP000352_GR
- KEGG:   rme:Rmet_1371
- eggNOG:   COG2141
- HOGENOM:   HBG639644
- OMA:   REVRFGI
- PhylomeDB:   Q1LNM2
- ProtClustDB:   PRK00719
- BioCyc:   RMET266264:RMET_1371-MONOMER
- HAMAP:   MF_01229
- InterPro:   IPR019911
- InterPro:   IPR011251
- InterPro:   IPR016048
- Gene3D:   G3DSA:3.20.20.30
- TIGRFAMs:   TIGR03565

Pfam domain/function: PF00296 Bac_luciferase; SSF51679 Luciferase_like

EC number: =1.14.14.5

Molecular weight: Translated: 41844; Mature: 41844

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLWFIPTHGDSRYLGTSEGAREVSFDYLKQVAVAADTLGYDGVLIPTGRSCEDPWVVA
CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHH
SALAAVTRKLRFLVALRPGLMTPTLAARMAATFDRVSNGRLLVNLVTGGDVAELEGDGLF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCEE
LNHAERYEASAEFIRVWRDLLAASHENGEISFEGKHVTVKGARVLYPPIQRPHPPVYFGG
ECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCEEEECCCCCCCCCEEECC
SSEAAHDLAAEQVETYLTWGEPPADVAKKIADVRARAAKHGRTVRFGIRLHVIVRETDAA
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCH
AWAAADELISKLDDQTVARAQAVFAKMDSEGQRRMAALHAGGTRRTREALEISPNLWAGV
HHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHCCC
GLVRGGAGTALVGDPKTVAARIEEYAALGIDTFVLSGYPHLEEAYRFAELVFPLLPRKVR
CEEECCCCCEEECCHHHHHHHHHHHHHHCHHHHEECCCCCHHHHHHHHHHHHHHCCHHHH
DKLPGQVLSGPFGEVMATGIVPIASQS
HHCCCHHHCCCHHHHHHHCCCEECCCC
>Mature Secondary Structure
MQVLWFIPTHGDSRYLGTSEGAREVSFDYLKQVAVAADTLGYDGVLIPTGRSCEDPWVVA
CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHH
SALAAVTRKLRFLVALRPGLMTPTLAARMAATFDRVSNGRLLVNLVTGGDVAELEGDGLF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCEE
LNHAERYEASAEFIRVWRDLLAASHENGEISFEGKHVTVKGARVLYPPIQRPHPPVYFGG
ECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCEEEECCCCCCCCCEEECC
SSEAAHDLAAEQVETYLTWGEPPADVAKKIADVRARAAKHGRTVRFGIRLHVIVRETDAA
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEECCCH
AWAAADELISKLDDQTVARAQAVFAKMDSEGQRRMAALHAGGTRRTREALEISPNLWAGV
HHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHCCCCHHCCC
GLVRGGAGTALVGDPKTVAARIEEYAALGIDTFVLSGYPHLEEAYRFAELVFPLLPRKVR
CEEECCCCCEEECCHHHHHHHHHHHHHHCHHHHEECCCCCHHHHHHHHHHHHHHCCHHHH
DKLPGQVLSGPFGEVMATGIVPIASQS
HHCCCHHHCCCHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA