Definition Cupriavidus metallidurans CH34 chromosome, complete genome.
Accession NC_007973
Length 3,928,089

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The map label for this gene is tmoD [H]

Identifier: 94310255

GI number: 94310255

Start: 1429148

End: 1429462

Strand: Reverse

Name: tmoD [H]

Synonym: Rmet_1313

Alternate gene names: 94310255

Gene position: 1429462-1429148 (Counterclockwise)

Preceding gene: 94310256

Following gene: 94310254

Centisome position: 36.39

GC content: 56.51

Gene sequence:

>315_bases
GTGACTAAAAACGATATTGCATCGGCCCACTTTAACAACAGGGTGGGTCCGGTCATGCGTGCTGGCGAGCTCGCTGAGGC
AGTAGTTGAGGCAGCGCGAGAGGACAACCCTGGCAAGGAAATTCGCGTGGACGACAAGCGCGCCTATTTGCGCATCGACA
CCGACGGGGAGTTAATCCTGCGCCGCGAAACGATTGAGCGGGCGCTGGGCCGGCCGTTCAAAATGCCTGACCTCGAGGTT
GAATTGAGTTCGTTTGCCGGGCGTATTGAAACTATGCCCGATCAGGTCCGCTTCTACTTTGAGAAGCAAGTCTGA

Upstream 100 bases:

>100_bases
GAAGGCGATGCGGTATTTGTGGAAACCGAGGGTGTGAAGCCGCTGTTCGCACATACGTGAGCAGCATTCGGTCCGCCAAT
TCGAAAGCAAGGAGAAAGCT

Downstream 100 bases:

>100_bases
GTAGCGGTACCGGACAACATCCGCCCCACCAAGTAAAGATTCGAGGAGACAAGCATGTCTGAAGTTCAAGTTCTCAAGCC
GCTCAAGACCTGGAGTCATC

Product: Toluene-4-monooxygenase system protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTKNDIASAHFNNRVGPVMRAGELAEAVVEAAREDNPGKEIRVDDKRAYLRIDTDGELILRRETIERALGRPFKMPDLEV
ELSSFAGRIETMPDQVRFYFEKQV

Sequences:

>Translated_104_residues
MTKNDIASAHFNNRVGPVMRAGELAEAVVEAAREDNPGKEIRVDDKRAYLRIDTDGELILRRETIERALGRPFKMPDLEV
ELSSFAGRIETMPDQVRFYFEKQV
>Mature_103_residues
TKNDIASAHFNNRVGPVMRAGELAEAVVEAAREDNPGKEIRVDDKRAYLRIDTDGELILRRETIERALGRPFKMPDLEVE
LSSFAGRIETMPDQVRFYFEKQV

Specific function: Hydroxylates toluene to form p-cresol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003454
- ProDom:   PD004249 [H]

Pfam domain/function: PF02406 MmoB_DmpM [H]

EC number: NA

Molecular weight: Translated: 11909; Mature: 11777

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNDIASAHFNNRVGPVMRAGELAEAVVEAAREDNPGKEIRVDDKRAYLRIDTDGELIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCEEE
RRETIERALGRPFKMPDLEVELSSFAGRIETMPDQVRFYFEKQV
EHHHHHHHHCCCCCCCCCEEEHHHHCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TKNDIASAHFNNRVGPVMRAGELAEAVVEAAREDNPGKEIRVDDKRAYLRIDTDGELIL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCEEE
RRETIERALGRPFKMPDLEVELSSFAGRIETMPDQVRFYFEKQV
EHHHHHHHHCCCCCCCCCEEEHHHHCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1885512 [H]