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The map label for this gene is tnpA

Identifier: 94310245

GI number: 94310245

Start: 1416784

End: 1417749

Strand: Direct

Name: tnpA

Synonym: Rmet_1301

Alternate gene names: NA

Gene position: 1416784-1417749 (Clockwise)

Preceding gene: 94310243

Following gene: 335055524

Centisome position: 36.07

GC content: 60.25

Gene sequence:

>966_bases
ATGCATCTGAGGCTGCACAAGAACGCCACCACGACACCCAGGATCCGCGCCGAGATCCAGGTCAGCAAGGAGCCCATGAG
GGTTCTGGCCCAGCGCTTTGGCGTGAGTGTCTCCACCATCGCTCGCTGGAAGAAGCGTGCATCGGTTCATGACGCCTCCC
ATACCCCTCATCGACTGCAAACCACGCTGACGCCGGCCCAGGAGTCCATCGTGCTCGTCTTGCGTAAAAGCCTGGGCCTT
TCGCTGGATGACCTGCTGGCAGTCGTACGCGAGTTCATCCATCCGACCGTCTCACGCGCTGCCTTGCACCGCATGCTCAA
ACGCCATGGAGTGTCGGCGCGCGAGGCATTGAGCGTGGATCGCCCCAGGACCAAGCCGTTCAAGGCCTACGAGCCCGGCT
TCGTCCACATCGATGTGAAGTACCTGCCGCAGATGGCGGACGAAACCACGCGGCGTTACCTGTTTGTGGCCATTGATCGC
GCCACCCGCTGGGTGTTCGTGCGTGTCTATGCCAGCAAGAGCGCTACCAACGCCCGGCGCTTCCTGAAGGAATTGCACAA
GGCCGCTGCCTTCCGTATCCGAACGATCCTGACCGACAACGGCAAGGAATTCACGGATCGCTTCATCACACGGGGAGAGC
GTACGCCGACCGGCAGGCATCAGTTCGATCAGCTCTGCGAGGAGCTAGGCATTGAGCATCGCCTGACCCGCCCAAAACAC
CCGCAGACCAACGGCATGGTTGAACGCTTCAACGGGCGCATCGCCGACATCCTGCGCACCCATCACTTCCATTCCGGCGA
AGAACTTGAGGCCACCATCCTGCGGTATGTCTGGCTGTACAATCACCAACTGCCACAGAAAGCCTTGGGGCATGTCAGCC
CCATCCAGGCCATGAAACAATGGCAGCGATCACACCCCGAACTGTTCAACAGACGTGTTACCAATCAGCCGGGACACGAC
ACCTAA

Upstream 100 bases:

>100_bases
ATCTGCAGGTGGTCCTGCAGTGTCGTGTCCCTGATGATTGGTTAATTGGTTCACGCCGTGGTTTACTCTTGGCCCGAGAG
GTCATGCTGGAGCTGAAACG

Downstream 100 bases:

>100_bases
TCGCCTTCGGCAGACCGCGATGCAATGCCACGCGTTCCAGAATGCGCGTCAGTCCGTGTCCGCTGATAGCTCGCTCCGGC
ACAATGGCCACGGCTTCATG

Product: transposase ISRme5 (copy c)

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Catalytic Subunit; Transcriptional Regulator; Integrase; Integrase Catalytic Domain-Containing Protein; Integrase Protein; Transposase For ISMyma; Integrase Catalytic Core; Fis Family Transcriptional Regulator; Transposase And Inactivated Derivatives; ISKpn8 Transposase; LOW QUALITY PROTEIN Integrase Catalytic Subunit; ISAca1 Transposase; Transposase ; Hypothethical Protein Transposase; Instegrase; Insertion Element ISCmi2 Transposase; Transcriptional Regulator Fis Family Protein; Insertion Sequence Transposase Protein; Transposase Of; LOW QUALITY PROTEIN Transposase

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MHLRLHKNATTTPRIRAEIQVSKEPMRVLAQRFGVSVSTIARWKKRASVHDASHTPHRLQTTLTPAQESIVLVLRKSLGL
SLDDLLAVVREFIHPTVSRAALHRMLKRHGVSAREALSVDRPRTKPFKAYEPGFVHIDVKYLPQMADETTRRYLFVAIDR
ATRWVFVRVYASKSATNARRFLKELHKAAAFRIRTILTDNGKEFTDRFITRGERTPTGRHQFDQLCEELGIEHRLTRPKH
PQTNGMVERFNGRIADILRTHHFHSGEELEATILRYVWLYNHQLPQKALGHVSPIQAMKQWQRSHPELFNRRVTNQPGHD
T

Sequences:

>Translated_321_residues
MHLRLHKNATTTPRIRAEIQVSKEPMRVLAQRFGVSVSTIARWKKRASVHDASHTPHRLQTTLTPAQESIVLVLRKSLGL
SLDDLLAVVREFIHPTVSRAALHRMLKRHGVSAREALSVDRPRTKPFKAYEPGFVHIDVKYLPQMADETTRRYLFVAIDR
ATRWVFVRVYASKSATNARRFLKELHKAAAFRIRTILTDNGKEFTDRFITRGERTPTGRHQFDQLCEELGIEHRLTRPKH
PQTNGMVERFNGRIADILRTHHFHSGEELEATILRYVWLYNHQLPQKALGHVSPIQAMKQWQRSHPELFNRRVTNQPGHD
T
>Mature_321_residues
MHLRLHKNATTTPRIRAEIQVSKEPMRVLAQRFGVSVSTIARWKKRASVHDASHTPHRLQTTLTPAQESIVLVLRKSLGL
SLDDLLAVVREFIHPTVSRAALHRMLKRHGVSAREALSVDRPRTKPFKAYEPGFVHIDVKYLPQMADETTRRYLFVAIDR
ATRWVFVRVYASKSATNARRFLKELHKAAAFRIRTILTDNGKEFTDRFITRGERTPTGRHQFDQLCEELGIEHRLTRPKH
PQTNGMVERFNGRIADILRTHHFHSGEELEATILRYVWLYNHQLPQKALGHVSPIQAMKQWQRSHPELFNRRVTNQPGHD
T

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37272; Mature: 37272

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLRLHKNATTTPRIRAEIQVSKEPMRVLAQRFGVSVSTIARWKKRASVHDASHTPHRLQ
CEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHH
TTLTPAQESIVLVLRKSLGLSLDDLLAVVREFIHPTVSRAALHRMLKRHGVSAREALSVD
HCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHCCC
RPRTKPFKAYEPGFVHIDVKYLPQMADETTRRYLFVAIDRATRWVFVRVYASKSATNARR
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHEEEEEEEECCCEEEEEEEEECCCHHHHHH
FLKELHKAAAFRIRTILTDNGKEFTDRFITRGERTPTGRHQFDQLCEELGIEHRLTRPKH
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHCCCCCCC
PQTNGMVERFNGRIADILRTHHFHSGEELEATILRYVWLYNHQLPQKALGHVSPIQAMKQ
CCCCCHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHH
WQRSHPELFNRRVTNQPGHDT
HHHCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHLRLHKNATTTPRIRAEIQVSKEPMRVLAQRFGVSVSTIARWKKRASVHDASHTPHRLQ
CEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHH
TTLTPAQESIVLVLRKSLGLSLDDLLAVVREFIHPTVSRAALHRMLKRHGVSAREALSVD
HCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHCCC
RPRTKPFKAYEPGFVHIDVKYLPQMADETTRRYLFVAIDRATRWVFVRVYASKSATNARR
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHEEEEEEEECCCEEEEEEEEECCCHHHHHH
FLKELHKAAAFRIRTILTDNGKEFTDRFITRGERTPTGRHQFDQLCEELGIEHRLTRPKH
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHCCCCCCC
PQTNGMVERFNGRIADILRTHHFHSGEELEATILRYVWLYNHQLPQKALGHVSPIQAMKQ
CCCCCHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHH
WQRSHPELFNRRVTNQPGHDT
HHHCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA