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The map label for this gene is ybaQ [C]

Identifier: 94310238

GI number: 94310238

Start: 1410478

End: 1410861

Strand: Reverse

Name: ybaQ [C]

Synonym: Rmet_1294

Alternate gene names: 94310238

Gene position: 1410861-1410478 (Counterclockwise)

Preceding gene: 94310239

Following gene: 94310237

Centisome position: 35.92

GC content: 68.49

Gene sequence:

>384_bases
TTGATCAAGGCATCTCTCTCGTTCTGTTTCTTCATCATGACGCGCATTGGTCCACGTTCATCGCACCCTGCCGCACCGGT
TCTTCCGCCGGTGGGTGTGCCGCTGCGCGTGCCCACGCACCCTGGGCGGCTGCTGGCGCGCACCTGCTTGTTGCCGCTGG
CGTTGAACCAGAGCGAGGCGGCCCGGCTGCTGGGCCTCTCGCGCCGCCGCCTGCACGAGCTGGTGCATGGCCAGCGCGCA
ATGTCGCCCGACACCGCCATCCGTTGTGCGCGTCAGTTCGGCATCGACGCCGGCTTCTGGCTCGCGCAGCAGGCCGCCTG
GGACAGCTTCCACGCCTGGAAGCGCCTGTCCTCGGGTTCGGCCACGTCCCCTTTCCCCCGCTGA

Upstream 100 bases:

>100_bases
GCACGTTTAAAGAGTAACTCCCCCCCGCGCCGCCTTCGGCGTCACCCCCCCCTCTGGGGGCGGTGCTGGAGGCCCGGCGA
AGCCGGTTCCTCGGCACCTC

Downstream 100 bases:

>100_bases
TTTCACACAGGCTTGCCTGCCATGCGCACCACTCCGACCGAATCCACCTGTCACCCCGGTGGTGACACTCTGCCGGCCCG
CATCGTCGTGCTGGGCATCG

Product: putative plasmid maintenance system antidote protein

Products: NA

Alternate protein names: XRE Family Plasmid Maintenance System Antidote Protein

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MIKASLSFCFFIMTRIGPRSSHPAAPVLPPVGVPLRVPTHPGRLLARTCLLPLALNQSEAARLLGLSRRRLHELVHGQRA
MSPDTAIRCARQFGIDAGFWLAQQAAWDSFHAWKRLSSGSATSPFPR

Sequences:

>Translated_127_residues
MIKASLSFCFFIMTRIGPRSSHPAAPVLPPVGVPLRVPTHPGRLLARTCLLPLALNQSEAARLLGLSRRRLHELVHGQRA
MSPDTAIRCARQFGIDAGFWLAQQAAWDSFHAWKRLSSGSATSPFPR
>Mature_127_residues
MIKASLSFCFFIMTRIGPRSSHPAAPVLPPVGVPLRVPTHPGRLLARTCLLPLALNQSEAARLLGLSRRRLHELVHGQRA
MSPDTAIRCARQFGIDAGFWLAQQAAWDSFHAWKRLSSGSATSPFPR

Specific function: Unknown

COG id: COG3093

COG function: function code R; Plasmid maintenance system antidote protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13979; Mature: 13979

Theoretical pI: Translated: 12.25; Mature: 12.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKASLSFCFFIMTRIGPRSSHPAAPVLPPVGVPLRVPTHPGRLLARTCLLPLALNQSEA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHH
ARLLGLSRRRLHELVHGQRAMSPDTAIRCARQFGIDAGFWLAQQAAWDSFHAWKRLSSGS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
ATSPFPR
CCCCCCC
>Mature Secondary Structure
MIKASLSFCFFIMTRIGPRSSHPAAPVLPPVGVPLRVPTHPGRLLARTCLLPLALNQSEA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHH
ARLLGLSRRRLHELVHGQRAMSPDTAIRCARQFGIDAGFWLAQQAAWDSFHAWKRLSSGS
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
ATSPFPR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA