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The map label for this gene is ybhF [H]

Identifier: 94310221

GI number: 94310221

Start: 1398971

End: 1399222

Strand: Reverse

Name: ybhF [H]

Synonym: Rmet_1277

Alternate gene names: 94310221

Gene position: 1399222-1398971 (Counterclockwise)

Preceding gene: 94310225

Following gene: 94310220

Centisome position: 35.62

GC content: 57.94

Gene sequence:

>252_bases
TTGATTCACCGGACACGGTCTCTGTTTCTGGATGAACCCACTTCAGGGGTAGATCCCATCACCCGGCGCGAATTCTGGAC
CCACATCAACGGACTGGCCCGCAAGGGCGTGACCATCATGGTCACCACCCACTTCATGGACGAGGCCGAATACTGCGATC
GCGTGGCCATGCTGTCGCGTGCGCAACTGATTGCGCTGGATACGCCCGACGCGCTCAGTATGAGCTCCATTAACCGCATC
CTATTTGCCTAG

Upstream 100 bases:

>100_bases
CGCCACGCCCGCGCCAATAGTCGTGCATGAAGCCCGCGAATTCCCGCAAACCCATCCGGTACATGCGATACAGCATAAAC
AGCAAGTTTGAGATAGCCCC

Downstream 100 bases:

>100_bases
AGGGAAGTCGTGCACAGTTGACTGGGTGATGATTGAAAACGGAGTCGAGGATGTCGGAAGCGGTAGCGCAGTGGGCGGGC
CACTTGGAGGCGATCGAGGC

Product: putative transporter fused subunits of ABC superfamily: ATP-binding components (fragment)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MIHRTRSLFLDEPTSGVDPITRREFWTHINGLARKGVTIMVTTHFMDEAEYCDRVAMLSRAQLIALDTPDALSMSSINRI
LFA

Sequences:

>Translated_83_residues
MIHRTRSLFLDEPTSGVDPITRREFWTHINGLARKGVTIMVTTHFMDEAEYCDRVAMLSRAQLIALDTPDALSMSSINRI
LFA
>Mature_83_residues
MIHRTRSLFLDEPTSGVDPITRREFWTHINGLARKGVTIMVTTHFMDEAEYCDRVAMLSRAQLIALDTPDALSMSSINRI
LFA

Specific function: Unknown

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Escherichia coli, GI87081782, Length=78, Percent_Identity=65.3846153846154, Blast_Score=118, Evalue=7e-29,
Organism=Escherichia coli, GI48994943, Length=73, Percent_Identity=49.3150684931507, Blast_Score=79, Evalue=8e-17,
Organism=Escherichia coli, GI1786319, Length=73, Percent_Identity=38.3561643835616, Blast_Score=61, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85725262, Length=73, Percent_Identity=35.6164383561644, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 9453; Mature: 9453

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHRTRSLFLDEPTSGVDPITRREFWTHINGLARKGVTIMVTTHFMDEAEYCDRVAMLSR
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCC
AQLIALDTPDALSMSSINRILFA
CEEEEECCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIHRTRSLFLDEPTSGVDPITRREFWTHINGLARKGVTIMVTTHFMDEAEYCDRVAMLSR
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCC
AQLIALDTPDALSMSSINRILFA
CEEEEECCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]