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The map label for this gene is trkD [H]

Identifier: 94310176

GI number: 94310176

Start: 1351097

End: 1353067

Strand: Direct

Name: trkD [H]

Synonym: Rmet_1231

Alternate gene names: 94310176

Gene position: 1351097-1353067 (Clockwise)

Preceding gene: 94310175

Following gene: 94310178

Centisome position: 34.4

GC content: 61.75

Gene sequence:

>1971_bases
ATGCCCGGCAGCCCGCCGGGTGAGCCGAAGTCAGGCCGTAGAGGCGCGAGCCGGTCCACCAGACCCAAATCCATGACTCA
ATCCACAACCAGTCACTACTACGTCGAAAGCCCGAGCTCCCGTGCGCTCGTGGTCGGCGCGATCGGTGTCGTCTTCGGCG
ATATCGGCACCAGTCCCCTTTACTCGCTCAAGGAATGCTTCAGCCCGGAACATGGCATTCCGTTCAGTCCCGATGCGGTA
CTCGGCATCATCTCGATGCTGTTCTGGGCCTTTGTTATCGTCGTGTCGCTGAAGTACGTGATGTTCGTGATGCGCGCCGA
CAACAACGGCGAGGGCGGCATTCTGGCGCTGATGGCGCTGGCCTTGCGCACAGCGGCGCCACGGTCACGCATGGCCAAGC
TGATCATGATGTTCGGCATCTTCGGCGCGTGCATGTTCTACGGCGACGCGGTGATCACGCCGGCCATCTCGGTGCTGTCT
GCCGTCGAAGGCCTGGAGATTGCCGCGCCGGGGCTTTCCCACTTCGTGATTCCGATCACGCTGCTGATCCTGGCCTTGCT
GTTCTTTATCCAGCGCAGCGGCACGCATGTGGTGGGCAAGCTGTTCGGGCCGATCATGGTGGTGTGGTTCCTGGCGCTCG
GCGCGCTGGGCCTGATCCATTTGGTGCAGGCACCCGGGATCGTCAAGGCCATCAACCCGGTCTATGCGGTGTCATTCCTG
CATGACCACTCGCTCCAGGCGTTCATCGTGCTGGGTAGCGTGTTCCTGGTGCTGACTGGCGCGGAGGCGCTCTACGCCGA
TATGGGCCACTTCGGCGCGAAGCCGATCCGCACGGCCTGGTTCGTGCTGGTCATGCCGTGCCTGATCCTGAACTACTTTG
GCCAGGGGGCAATGCTGCTGGGCAACCCCGACGCGATCGAAAATCCTTTCTACCTGATGGTGCCGTCGGCGCTGCAATTG
CCGATGGTGTTGCTGGCCACCGCGGCCACGGTGATTGCGTCGCAGGCCGTCATCTCGGGAGCGTTCTCGCTGACGAGCCA
GGCCATTCAGCTTGGTTTCATGCCGCGGATGCGTATCCGCTATACCTCGGCGGCGGAAATCGGCCAGATCTATATGCCCG
TGATCAACTGGATCCTGCTGGTACTTGTGATCTGCGTGGTGCTGGCGTTCAAGAAGTCCGATAACCTGGCGGCCGCGTAC
GGGATCGCCGTGACCACGACGATGGTGATCACCACGTTCCTGGCCGCGCTGGTGATGCGCAACGTCTGGAAGTGGAACCC
TGCATTGGTGACGCTGATCAGCCTGACGTTCCTGGTGGTCGACATGTCGTTCTTCGCGGCCAACCTGCTCAAGATCGCCG
AGGGCGGCTGGTTCCCGCTGCTGATGGGCGGTAGCGCGTTCTTCCTGTTGATGACCTGGCACAGTGGCCGGAAGCTGCTG
CGCGCGCGTAGCCTGGAGGATGGCATTCCGCTGGAGCCGTTTATCGCCGGCCTGCTGGCGCACCCGCCGCATCGCGTGGA
AGGTACGGCCGTGTTCCTGACCGGCAACACCGAATCGGTGCCGGTGTCGCTGCTGCACAACCTCAAGCACAACCGCGTGC
TGCACGAGCGGGTGGTTTTCCTGCAGTTCGTGACGCGTGACATTCCGTACGTGGACGACGACGAGCGCCTGAGCTGCAAG
GATCTGGGGGGAGGCGTCTACATCCTCAAGTCCGAATATGGCTTCAAGGAAACGCCTGATGTGCAGCGGGTTCTGGATCT
GGCCCAGCGCAAGCTCGGCATGCAATTCGAGCTGATGGAAACCTCATTCTTCATCGCGCGTGAATCGGTGATTCCGTCGA
AGCTGCCGGGTATGTCGATGTGGCGCGAAAGCCTGTTCGCGTGGATGCATCAGAACGGCGCCAAACCGTCGGACTTCTTC
TCGATTCCGGCCAACCGCGTGGTGGAGCTTGGGACGAAGGTAGAAATCTGA

Upstream 100 bases:

>100_bases
TGCAATGCAATAGAGGTAGAGACGGCCATACCGCCCCATCGGGGACCGGAGCCGCTTGCGCGAGAGAATTTGTGCCTGAA
TCACCACATCGGTAGGTGTT

Downstream 100 bases:

>100_bases
TTCCCGAGGTCCAGATGTGACAACGCCCCGCAATTGCGGGGCGTTTTGTTTTTTCCTCCTCTCCCGCGAGCGGGAGAGGA
GAACTGCCGGACTTAGCGCT

Product: putative potassium transport system protein kup

Products: K (I) [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 656; Mature: 655

Protein sequence:

>656_residues
MPGSPPGEPKSGRRGASRSTRPKSMTQSTTSHYYVESPSSRALVVGAIGVVFGDIGTSPLYSLKECFSPEHGIPFSPDAV
LGIISMLFWAFVIVVSLKYVMFVMRADNNGEGGILALMALALRTAAPRSRMAKLIMMFGIFGACMFYGDAVITPAISVLS
AVEGLEIAAPGLSHFVIPITLLILALLFFIQRSGTHVVGKLFGPIMVVWFLALGALGLIHLVQAPGIVKAINPVYAVSFL
HDHSLQAFIVLGSVFLVLTGAEALYADMGHFGAKPIRTAWFVLVMPCLILNYFGQGAMLLGNPDAIENPFYLMVPSALQL
PMVLLATAATVIASQAVISGAFSLTSQAIQLGFMPRMRIRYTSAAEIGQIYMPVINWILLVLVICVVLAFKKSDNLAAAY
GIAVTTTMVITTFLAALVMRNVWKWNPALVTLISLTFLVVDMSFFAANLLKIAEGGWFPLLMGGSAFFLLMTWHSGRKLL
RARSLEDGIPLEPFIAGLLAHPPHRVEGTAVFLTGNTESVPVSLLHNLKHNRVLHERVVFLQFVTRDIPYVDDDERLSCK
DLGGGVYILKSEYGFKETPDVQRVLDLAQRKLGMQFELMETSFFIARESVIPSKLPGMSMWRESLFAWMHQNGAKPSDFF
SIPANRVVELGTKVEI

Sequences:

>Translated_656_residues
MPGSPPGEPKSGRRGASRSTRPKSMTQSTTSHYYVESPSSRALVVGAIGVVFGDIGTSPLYSLKECFSPEHGIPFSPDAV
LGIISMLFWAFVIVVSLKYVMFVMRADNNGEGGILALMALALRTAAPRSRMAKLIMMFGIFGACMFYGDAVITPAISVLS
AVEGLEIAAPGLSHFVIPITLLILALLFFIQRSGTHVVGKLFGPIMVVWFLALGALGLIHLVQAPGIVKAINPVYAVSFL
HDHSLQAFIVLGSVFLVLTGAEALYADMGHFGAKPIRTAWFVLVMPCLILNYFGQGAMLLGNPDAIENPFYLMVPSALQL
PMVLLATAATVIASQAVISGAFSLTSQAIQLGFMPRMRIRYTSAAEIGQIYMPVINWILLVLVICVVLAFKKSDNLAAAY
GIAVTTTMVITTFLAALVMRNVWKWNPALVTLISLTFLVVDMSFFAANLLKIAEGGWFPLLMGGSAFFLLMTWHSGRKLL
RARSLEDGIPLEPFIAGLLAHPPHRVEGTAVFLTGNTESVPVSLLHNLKHNRVLHERVVFLQFVTRDIPYVDDDERLSCK
DLGGGVYILKSEYGFKETPDVQRVLDLAQRKLGMQFELMETSFFIARESVIPSKLPGMSMWRESLFAWMHQNGAKPSDFF
SIPANRVVELGTKVEI
>Mature_655_residues
PGSPPGEPKSGRRGASRSTRPKSMTQSTTSHYYVESPSSRALVVGAIGVVFGDIGTSPLYSLKECFSPEHGIPFSPDAVL
GIISMLFWAFVIVVSLKYVMFVMRADNNGEGGILALMALALRTAAPRSRMAKLIMMFGIFGACMFYGDAVITPAISVLSA
VEGLEIAAPGLSHFVIPITLLILALLFFIQRSGTHVVGKLFGPIMVVWFLALGALGLIHLVQAPGIVKAINPVYAVSFLH
DHSLQAFIVLGSVFLVLTGAEALYADMGHFGAKPIRTAWFVLVMPCLILNYFGQGAMLLGNPDAIENPFYLMVPSALQLP
MVLLATAATVIASQAVISGAFSLTSQAIQLGFMPRMRIRYTSAAEIGQIYMPVINWILLVLVICVVLAFKKSDNLAAAYG
IAVTTTMVITTFLAALVMRNVWKWNPALVTLISLTFLVVDMSFFAANLLKIAEGGWFPLLMGGSAFFLLMTWHSGRKLLR
ARSLEDGIPLEPFIAGLLAHPPHRVEGTAVFLTGNTESVPVSLLHNLKHNRVLHERVVFLQFVTRDIPYVDDDERLSCKD
LGGGVYILKSEYGFKETPDVQRVLDLAQRKLGMQFELMETSFFIARESVIPSKLPGMSMWRESLFAWMHQNGAKPSDFFS
IPANRVVELGTKVEI

Specific function: Transport of potassium into the cell [H]

COG id: COG3158

COG function: function code P; K+ transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family [H]

Homologues:

Organism=Escherichia coli, GI48994960, Length=615, Percent_Identity=50.7317073170732, Blast_Score=625, Evalue=1e-180,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003855
- InterPro:   IPR023051 [H]

Pfam domain/function: PF02705 K_trans [H]

EC number: NA

Molecular weight: Translated: 71580; Mature: 71449

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGSPPGEPKSGRRGASRSTRPKSMTQSTTSHYYVESPSSRALVVGAIGVVFGDIGTSPL
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEEEEEHHHHHHHCCCCCHH
YSLKECFSPEHGIPFSPDAVLGIISMLFWAFVIVVSLKYVMFVMRADNNGEGGILALMAL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHH
ALRTAAPRSRMAKLIMMFGIFGACMFYGDAVITPAISVLSAVEGLEIAAPGLSHFVIPIT
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
LLILALLFFIQRSGTHVVGKLFGPIMVVWFLALGALGLIHLVQAPGIVKAINPVYAVSFL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHH
HDHSLQAFIVLGSVFLVLTGAEALYADMGHFGAKPIRTAWFVLVMPCLILNYFGQGAMLL
HCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
GNPDAIENPFYLMVPSALQLPMVLLATAATVIASQAVISGAFSLTSQAIQLGFMPRMRIR
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
YTSAAEIGQIYMPVINWILLVLVICVVLAFKKSDNLAAAYGIAVTTTMVITTFLAALVMR
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NVWKWNPALVTLISLTFLVVDMSFFAANLLKIAEGGWFPLLMGGSAFFLLMTWHSGRKLL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEHHHHHHH
RARSLEDGIPLEPFIAGLLAHPPHRVEGTAVFLTGNTESVPVSLLHNLKHNRVLHERVVF
HHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LQFVTRDIPYVDDDERLSCKDLGGGVYILKSEYGFKETPDVQRVLDLAQRKLGMQFELME
HHHHHHCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEH
TSFFIARESVIPSKLPGMSMWRESLFAWMHQNGAKPSDFFSIPANRVVELGTKVEI
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PGSPPGEPKSGRRGASRSTRPKSMTQSTTSHYYVESPSSRALVVGAIGVVFGDIGTSPL
CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCEEEEEHHHHHHHCCCCCHH
YSLKECFSPEHGIPFSPDAVLGIISMLFWAFVIVVSLKYVMFVMRADNNGEGGILALMAL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHH
ALRTAAPRSRMAKLIMMFGIFGACMFYGDAVITPAISVLSAVEGLEIAAPGLSHFVIPIT
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCHHHHHHHHH
LLILALLFFIQRSGTHVVGKLFGPIMVVWFLALGALGLIHLVQAPGIVKAINPVYAVSFL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHH
HDHSLQAFIVLGSVFLVLTGAEALYADMGHFGAKPIRTAWFVLVMPCLILNYFGQGAMLL
HCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
GNPDAIENPFYLMVPSALQLPMVLLATAATVIASQAVISGAFSLTSQAIQLGFMPRMRIR
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
YTSAAEIGQIYMPVINWILLVLVICVVLAFKKSDNLAAAYGIAVTTTMVITTFLAALVMR
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NVWKWNPALVTLISLTFLVVDMSFFAANLLKIAEGGWFPLLMGGSAFFLLMTWHSGRKLL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEHHHHHHH
RARSLEDGIPLEPFIAGLLAHPPHRVEGTAVFLTGNTESVPVSLLHNLKHNRVLHERVVF
HHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LQFVTRDIPYVDDDERLSCKDLGGGVYILKSEYGFKETPDVQRVLDLAQRKLGMQFELME
HHHHHHCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEH
TSFFIARESVIPSKLPGMSMWRESLFAWMHQNGAKPSDFFSIPANRVVELGTKVEI
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: K (I) [Periplasm] [C]

Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA