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The map label for this gene is livM [H]

Identifier: 94310173

GI number: 94310173

Start: 1348256

End: 1349320

Strand: Direct

Name: livM [H]

Synonym: Rmet_1228

Alternate gene names: 94310173

Gene position: 1348256-1349320 (Clockwise)

Preceding gene: 94310172

Following gene: 94310174

Centisome position: 34.32

GC content: 66.85

Gene sequence:

>1065_bases
ATGCATTCCGATTCCTTGACACCGCCACCGCAGGACATCCGCCGCCCGGCCTGGATGGCGACCGCTGGCTGGCTGGTGGC
CTTGGCCGTGCTCTGCGCCATGCCGATGCTGCTGACCGCCGACAGCCACAAGTACTACATCGAGCTGCTCAGCAAGGTCA
TGATCATGGCGATCTTCGCGCTGTCGCTGCAGCTGCTGATTGGCTACACCGGGCTGGTGAGCCTGGGCCACGCCGCCTAC
TTCGCAATGGCCGCCTATGCCACGGCGATGCTGGCGCCCGAGAGCGGGCCGGGCAATGGCTGGCTGCTGCTGTTCGGCGC
CGTGGGCGCGGCGGCCGCGCTGGCGCTGGTGGTTGGCGCGCTCGTGCTGCGCACGCGCGGCATCTACTTCATCATGGTCA
CGCTGGCCTTCGCGCAGATGGTGTACTTCGTGTTCCACGACACGAAGATCGCCGGTGGCAGCGACGGCACCTACATCTAC
TTCCGTCCCGAGTTCGGGCTGTTTTCGGCGCGACCGGTGACCGTGAACGACCCCGTGCAGTTCTATTGGCTGGTGCTCGT
TGCGCTGGCGCTGACCGTGGCCGCGCTGACCTTGCTGCTGCGTTCCCGCTTCGGCCACGCGCTGGTGGGGATCCGGCACA
ACGAGCAGCGGATGCGGGCGGCCGGGTTTGGCACGTATCGCTATCAGCTCGGGGCGTTCGTCGTGGGCGGTGCGTTCGCG
GGGCTGGCTGGGTACCTCTATGCGATCCAGTTCGGTTTCGTGAATCCCGAGATTGCTTCCTGGCATCAGTCGGGCAACGC
GATGCTGATGGTGATTCTTGGCGGCGTCGGCAGCCTGGCTGGCGCCGTGCTGGGTGCATTCTCGTTCGTGCTGCTGGCCG
AATGGTTCGGCACGTTGACCAAGCACTGGCAGCTGCTGATGGGCGGTTTCATCATCCTGGCGGTGGCGTTGCTGCCGCGT
GGGCTGGTCAGCGTGCCGGCGGTGCTGCGGCATCGTTCTCCGCGTCGCGCGCGGCGGGCCGGCGCGGCCACCGAATCGAA
CACACGCAGCCGGGAGGCCGTATGA

Upstream 100 bases:

>100_bases
GCAGGATGCGGCTGGCGTGCTGGTCTACCTGCTGATGGCCGTGATCCTGCTGTGGAAGCCCCAGGGGCTGTTCCGCGCGG
GCTGAGCAGGAAATCCTGAC

Downstream 100 bases:

>100_bases
GCACGATCCCATCGGTTCCGGTACTCGATGCGCAAAGCCTCACGCGCCGATTTGGCGGGCTGACGGCGGTCAACAGTGTG
GACCTGGCCCTGCATCTGCA

Product: putative branched-chain amino acid ABC transporter, permease protein

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein M [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MHSDSLTPPPQDIRRPAWMATAGWLVALAVLCAMPMLLTADSHKYYIELLSKVMIMAIFALSLQLLIGYTGLVSLGHAAY
FAMAAYATAMLAPESGPGNGWLLLFGAVGAAAALALVVGALVLRTRGIYFIMVTLAFAQMVYFVFHDTKIAGGSDGTYIY
FRPEFGLFSARPVTVNDPVQFYWLVLVALALTVAALTLLLRSRFGHALVGIRHNEQRMRAAGFGTYRYQLGAFVVGGAFA
GLAGYLYAIQFGFVNPEIASWHQSGNAMLMVILGGVGSLAGAVLGAFSFVLLAEWFGTLTKHWQLLMGGFIILAVALLPR
GLVSVPAVLRHRSPRRARRAGAATESNTRSREAV

Sequences:

>Translated_354_residues
MHSDSLTPPPQDIRRPAWMATAGWLVALAVLCAMPMLLTADSHKYYIELLSKVMIMAIFALSLQLLIGYTGLVSLGHAAY
FAMAAYATAMLAPESGPGNGWLLLFGAVGAAAALALVVGALVLRTRGIYFIMVTLAFAQMVYFVFHDTKIAGGSDGTYIY
FRPEFGLFSARPVTVNDPVQFYWLVLVALALTVAALTLLLRSRFGHALVGIRHNEQRMRAAGFGTYRYQLGAFVVGGAFA
GLAGYLYAIQFGFVNPEIASWHQSGNAMLMVILGGVGSLAGAVLGAFSFVLLAEWFGTLTKHWQLLMGGFIILAVALLPR
GLVSVPAVLRHRSPRRARRAGAATESNTRSREAV
>Mature_354_residues
MHSDSLTPPPQDIRRPAWMATAGWLVALAVLCAMPMLLTADSHKYYIELLSKVMIMAIFALSLQLLIGYTGLVSLGHAAY
FAMAAYATAMLAPESGPGNGWLLLFGAVGAAAALALVVGALVLRTRGIYFIMVTLAFAQMVYFVFHDTKIAGGSDGTYIY
FRPEFGLFSARPVTVNDPVQFYWLVLVALALTVAALTLLLRSRFGHALVGIRHNEQRMRAAGFGTYRYQLGAFVVGGAFA
GLAGYLYAIQFGFVNPEIASWHQSGNAMLMVILGGVGSLAGAVLGAFSFVLLAEWFGTLTKHWQLLMGGFIILAVALLPR
GLVSVPAVLRHRSPRRARRAGAATESNTRSREAV

Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789865, Length=317, Percent_Identity=31.5457413249211, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR021807 [H]

Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]

EC number: NA

Molecular weight: Translated: 38093; Mature: 38093

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSDSLTPPPQDIRRPAWMATAGWLVALAVLCAMPMLLTADSHKYYIELLSKVMIMAIFA
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LSLQLLIGYTGLVSLGHAAYFAMAAYATAMLAPESGPGNGWLLLFGAVGAAAALALVVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH
LVLRTRGIYFIMVTLAFAQMVYFVFHDTKIAGGSDGTYIYFRPEFGLFSARPVTVNDPVQ
HHHHHCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCCCCCCCCCCEECCCHHH
FYWLVLVALALTVAALTLLLRSRFGHALVGIRHNEQRMRAAGFGTYRYQLGAFVVGGAFA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHH
GLAGYLYAIQFGFVNPEIASWHQSGNAMLMVILGGVGSLAGAVLGAFSFVLLAEWFGTLT
HHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
KHWQLLMGGFIILAVALLPRGLVSVPAVLRHRSPRRARRAGAATESNTRSREAV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHSDSLTPPPQDIRRPAWMATAGWLVALAVLCAMPMLLTADSHKYYIELLSKVMIMAIFA
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LSLQLLIGYTGLVSLGHAAYFAMAAYATAMLAPESGPGNGWLLLFGAVGAAAALALVVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHH
LVLRTRGIYFIMVTLAFAQMVYFVFHDTKIAGGSDGTYIYFRPEFGLFSARPVTVNDPVQ
HHHHHCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCCCCCCCCCCEECCCHHH
FYWLVLVALALTVAALTLLLRSRFGHALVGIRHNEQRMRAAGFGTYRYQLGAFVVGGAFA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHH
GLAGYLYAIQFGFVNPEIASWHQSGNAMLMVILGGVGSLAGAVLGAFSFVLLAEWFGTLT
HHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
KHWQLLMGGFIILAVALLPRGLVSVPAVLRHRSPRRARRAGAATESNTRSREAV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2195019; 8041620; 9278503 [H]