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The map label for this gene is 94310171

Identifier: 94310171

GI number: 94310171

Start: 1346155

End: 1347348

Strand: Direct

Name: 94310171

Synonym: Rmet_1226

Alternate gene names: NA

Gene position: 1346155-1347348 (Clockwise)

Preceding gene: 94310170

Following gene: 94310172

Centisome position: 34.27

GC content: 63.9

Gene sequence:

>1194_bases
ATGCATCGCAATGCATCGCGCAGGCTATTGCCAGCCTGCCTCGCCGTCGCCACGCTGCTCGCCACGGGGTCCGTGGCACT
GGCCCAGAGTGCGCCGGCCACATCCAGCAAGATCAAGGTCGGCTTCATGCTGCCGTACACGGGCACTTATGCCGCCCTCG
GCGGGGCCATCGAGAATGGCTTCCGGATGTACGTGCAGGAGCAGGGCGGCAAGCTGGGCGGCCGCGAGGTTGAATACTTC
AAGGTCGATGACGAGTCCGATCCGGCCAAGGCGCCGGAAAATGCCACCAAGCTGATCAAGCGCGACCAGGTCGACGTGGT
GGTCGGCACGGTTCATTCGGGCGTGCAAATGGGCATCGTCAAGGTGGCCAAGGAAAACAATACGCTGCTGATCATTCCCA
ATGCCGGCGTGGACGAAGCCACCGGGCCGCTGTGCGGCTCCAACATCTTTCGTTCGTCGTTCTCGAACTGGCAGCCGGGC
TATGCAATGGGCCATGTGCTGGCGGATCGCGGCCTGAAGAAGGTGGTCACGCTGACGTGGAAATACGCAGCGGGCGAGCA
GTCGGTCAAGGGCTTCAAGGAAGCGTTCGAAGCCAAGGGCGGCAAGGTGGTGAAGGAGTTGAGCCTGCCGTTCCCGAACG
TCGAATTCCAGGCGCTGATTACCGAAGTGGCTTCGATCAAGCCCGACGCCGTGTTCGTGTTCTTCGCCGGCGGCGGCGCG
GTCAAGTTCGTCAAGGACTGGCAGGCCGCCGGTCTCAAGGACAAGATTCCGCTGTACGCATCAGGCTTCCTGACCGACGG
CACGCTCGAGGCGCAGGGCGTCGCGGCGCAGGGTCTGGAGACCACGCTGCACTATGCCGATGGCCTGACCAATCCGCGCG
ACAAGAGCTTCCGGCTCGACTACGCCAAGCTGTACAAGCTGCAGCCCGACGTCTACGCGGTACAAGGCTACGATGCCGCG
CAACTGCTGGCCGCTGGCGCCAATGCGGTCAAGGGCGACATGTCGCGCAAGCCGGAGGTCATCAAGGCGATGGAAGCCGC
GAAGGTGGATAGCCCGCGTGGCGCCTTCACGCTGTCGAAGGCGCACAACCCGGTGCAGGACTTCTATCTGCGCAAGGTCG
ATGGCCGCGACAACAAGGTCAGCAGCGTCGCCGTGAAGGCGCTGGCCGATCCGGCGCGCGGCTGCCGCCTGTAA

Upstream 100 bases:

>100_bases
TCAAATATAAAATAATTGGCCCGGACGGCAGGAACGCTGCCGTACCGCGGGCCAAATGGCTTGAAACCAAAGGCTTCAGA
CCACCAGGGAGGAGACCCCC

Downstream 100 bases:

>100_bases
TCGCACGTTGGAAAGCGGCATCGCGATGGACCTTGTCTCGTTTCTGATCCAGTGCCTGAACAGCGTGCAGTACGGGCTGC
TGCTGTTCCTCGTGGCCAGC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MHRNASRRLLPACLAVATLLATGSVALAQSAPATSSKIKVGFMLPYTGTYAALGGAIENGFRMYVQEQGGKLGGREVEYF
KVDDESDPAKAPENATKLIKRDQVDVVVGTVHSGVQMGIVKVAKENNTLLIIPNAGVDEATGPLCGSNIFRSSFSNWQPG
YAMGHVLADRGLKKVVTLTWKYAAGEQSVKGFKEAFEAKGGKVVKELSLPFPNVEFQALITEVASIKPDAVFVFFAGGGA
VKFVKDWQAAGLKDKIPLYASGFLTDGTLEAQGVAAQGLETTLHYADGLTNPRDKSFRLDYAKLYKLQPDVYAVQGYDAA
QLLAAGANAVKGDMSRKPEVIKAMEAAKVDSPRGAFTLSKAHNPVQDFYLRKVDGRDNKVSSVAVKALADPARGCRL

Sequences:

>Translated_397_residues
MHRNASRRLLPACLAVATLLATGSVALAQSAPATSSKIKVGFMLPYTGTYAALGGAIENGFRMYVQEQGGKLGGREVEYF
KVDDESDPAKAPENATKLIKRDQVDVVVGTVHSGVQMGIVKVAKENNTLLIIPNAGVDEATGPLCGSNIFRSSFSNWQPG
YAMGHVLADRGLKKVVTLTWKYAAGEQSVKGFKEAFEAKGGKVVKELSLPFPNVEFQALITEVASIKPDAVFVFFAGGGA
VKFVKDWQAAGLKDKIPLYASGFLTDGTLEAQGVAAQGLETTLHYADGLTNPRDKSFRLDYAKLYKLQPDVYAVQGYDAA
QLLAAGANAVKGDMSRKPEVIKAMEAAKVDSPRGAFTLSKAHNPVQDFYLRKVDGRDNKVSSVAVKALADPARGCRL
>Mature_397_residues
MHRNASRRLLPACLAVATLLATGSVALAQSAPATSSKIKVGFMLPYTGTYAALGGAIENGFRMYVQEQGGKLGGREVEYF
KVDDESDPAKAPENATKLIKRDQVDVVVGTVHSGVQMGIVKVAKENNTLLIIPNAGVDEATGPLCGSNIFRSSFSNWQPG
YAMGHVLADRGLKKVVTLTWKYAAGEQSVKGFKEAFEAKGGKVVKELSLPFPNVEFQALITEVASIKPDAVFVFFAGGGA
VKFVKDWQAAGLKDKIPLYASGFLTDGTLEAQGVAAQGLETTLHYADGLTNPRDKSFRLDYAKLYKLQPDVYAVQGYDAA
QLLAAGANAVKGDMSRKPEVIKAMEAAKVDSPRGAFTLSKAHNPVQDFYLRKVDGRDNKVSSVAVKALADPARGCRL

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 42408; Mature: 42408

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRNASRRLLPACLAVATLLATGSVALAQSAPATSSKIKVGFMLPYTGTYAALGGAIENG
CCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHCC
FRMYVQEQGGKLGGREVEYFKVDDESDPAKAPENATKLIKRDQVDVVVGTVHSGVQMGIV
EEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEHHCCHHEEEE
KVAKENNTLLIIPNAGVDEATGPLCGSNIFRSSFSNWQPGYAMGHVLADRGLKKVVTLTW
EEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEE
KYAAGEQSVKGFKEAFEAKGGKVVKELSLPFPNVEFQALITEVASIKPDAVFVFFAGGGA
EECCCCHHHHHHHHHHHCCCCCEEHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCE
VKFVKDWQAAGLKDKIPLYASGFLTDGTLEAQGVAAQGLETTLHYADGLTNPRDKSFRLD
EEEEHHHHHCCCCCCCCEEEECCEECCCCCCCCCHHCCHHHHHHHHCCCCCCCCCCEEEC
YAKLYKLQPDVYAVQGYDAAQLLAAGANAVKGDMSRKPEVIKAMEAAKVDSPRGAFTLSK
HHHHEEECCCEEEECCCCHHHHHHHCCCHHCCCCCCCCHHHHHHHHHCCCCCCCCEEECC
AHNPVQDFYLRKVDGRDNKVSSVAVKALADPARGCRL
CCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHRNASRRLLPACLAVATLLATGSVALAQSAPATSSKIKVGFMLPYTGTYAALGGAIENG
CCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHCC
FRMYVQEQGGKLGGREVEYFKVDDESDPAKAPENATKLIKRDQVDVVVGTVHSGVQMGIV
EEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEHHCCHHEEEE
KVAKENNTLLIIPNAGVDEATGPLCGSNIFRSSFSNWQPGYAMGHVLADRGLKKVVTLTW
EEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEE
KYAAGEQSVKGFKEAFEAKGGKVVKELSLPFPNVEFQALITEVASIKPDAVFVFFAGGGA
EECCCCHHHHHHHHHHHCCCCCEEHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCE
VKFVKDWQAAGLKDKIPLYASGFLTDGTLEAQGVAAQGLETTLHYADGLTNPRDKSFRLD
EEEEHHHHHCCCCCCCCEEEECCEECCCCCCCCCHHCCHHHHHHHHCCCCCCCCCCEEEC
YAKLYKLQPDVYAVQGYDAAQLLAAGANAVKGDMSRKPEVIKAMEAAKVDSPRGAFTLSK
HHHHEEECCCEEEECCCCHHHHHHHCCCHHCCCCCCCCHHHHHHHHHCCCCCCCCEEECC
AHNPVQDFYLRKVDGRDNKVSSVAVKALADPARGCRL
CCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA