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The map label for this gene is bioH [C]

Identifier: 94310078

GI number: 94310078

Start: 1239498

End: 1240313

Strand: Reverse

Name: bioH [C]

Synonym: Rmet_1133

Alternate gene names: 94310078

Gene position: 1240313-1239498 (Counterclockwise)

Preceding gene: 94310079

Following gene: 94310077

Centisome position: 31.58

GC content: 68.63

Gene sequence:

>816_bases
ATGGAACTGAAACTCTCCGGCCACAAGGCCTACGCCTACACCGGCGGCAAGCCGTTCGACCCCGCCCTGCCCTGCGCCGT
CTTCGTGCACGGTGCGCAGAACGATCACAGCGTCTGGGGGCTGCAGACGCGCTGGTTCGCCAATCACGGCTTCTCGGTGC
TGTCCGTCGACCTGCCCGGACACAATCGCAGCGAAGGCGCGCCGCTGACGTCGGTCGAGGACATGGCCGACTGGGTGATG
GCGCTGGTCGCGGCAGCCGGCGTGAAGGCGCCGGCACTGGTGTTCGGCCACAGCATGGGCTCCCTGATCGCGCTCGAATG
CGCGGCGCGGCACCCCCAGGCGGTGCGCGCGATCGGCCTGCTGGCCACCGCCTATCCGATGAAGGTGTCCGACGCCCTGC
TCGACGCCGCCCTGAACCGCGAGGGCGATGCCATCGCGATGGTCAACCAGTGGTCGATCTCGAGCCTTGCCAGCAAGCCC
TCCTCCCCCGGCCCGGGCGCGTGGATGCACGGCGGCAGCCAGCGTCTGATGGAGCGGATCTCGGCGCGCAATCCCGGGGC
GCATGTGTTCCATACCGACTTCTCGGCGTGCAACGGCTACGCGCATGGTGAGGAAGCCGCAGCGGCGGTGGCATGTCCGG
CGCTGTTCGTGGTGGGGACCAAGGACATGATGACGTCGCCCAAGGCAGCCCAGGCCCTGGCCGGCAAGATGAAGAACGCC
AGGATCGTCACGGTGCCGAGCGGACACGCCATGATGGGAGAAAAGCCCGACGAGGTGCTGGACGCGCTGGCGGGATTCGC
GAAGACCGCCCGCTAG

Upstream 100 bases:

>100_bases
CGATCCGCCTGTCGATCGGCCTGGAGGATCCGGACGACCTGATCGACGACCTGAAACGCGGCCTCAAGGCCGCCGAGAAG
GCCATGGGAGGGAAAGCCTG

Downstream 100 bases:

>100_bases
GAAACACTAGAAAGAAAAAAACAGGAGACTGCCATGGCCCATGCCCACACCAAGGAATTCACCAGCTTTTCCGATTTCTA
CCCGTTCTACCTGAACGAGC

Product: alpha/beta hydrolase fold:Thioesterase

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase; Hydrolase; Hydrolase Protein; Hydolase; Carboxylesterase; Hydrolase Alpha/Beta Fold Family; Glutamate Decarboxylase-Like PLP-Dependent Protein; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MELKLSGHKAYAYTGGKPFDPALPCAVFVHGAQNDHSVWGLQTRWFANHGFSVLSVDLPGHNRSEGAPLTSVEDMADWVM
ALVAAAGVKAPALVFGHSMGSLIALECAARHPQAVRAIGLLATAYPMKVSDALLDAALNREGDAIAMVNQWSISSLASKP
SSPGPGAWMHGGSQRLMERISARNPGAHVFHTDFSACNGYAHGEEAAAAVACPALFVVGTKDMMTSPKAAQALAGKMKNA
RIVTVPSGHAMMGEKPDEVLDALAGFAKTAR

Sequences:

>Translated_271_residues
MELKLSGHKAYAYTGGKPFDPALPCAVFVHGAQNDHSVWGLQTRWFANHGFSVLSVDLPGHNRSEGAPLTSVEDMADWVM
ALVAAAGVKAPALVFGHSMGSLIALECAARHPQAVRAIGLLATAYPMKVSDALLDAALNREGDAIAMVNQWSISSLASKP
SSPGPGAWMHGGSQRLMERISARNPGAHVFHTDFSACNGYAHGEEAAAAVACPALFVVGTKDMMTSPKAAQALAGKMKNA
RIVTVPSGHAMMGEKPDEVLDALAGFAKTAR
>Mature_271_residues
MELKLSGHKAYAYTGGKPFDPALPCAVFVHGAQNDHSVWGLQTRWFANHGFSVLSVDLPGHNRSEGAPLTSVEDMADWVM
ALVAAAGVKAPALVFGHSMGSLIALECAARHPQAVRAIGLLATAYPMKVSDALLDAALNREGDAIAMVNQWSISSLASKP
SSPGPGAWMHGGSQRLMERISARNPGAHVFHTDFSACNGYAHGEEAAAAVACPALFVVGTKDMMTSPKAAQALAGKMKNA
RIVTVPSGHAMMGEKPDEVLDALAGFAKTAR

Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28339; Mature: 28339

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKLSGHKAYAYTGGKPFDPALPCAVFVHGAQNDHSVWGLQTRWFANHGFSVLSVDLPG
CCEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEECCEEEEECCCCCEEEEEECCC
HNRSEGAPLTSVEDMADWVMALVAAAGVKAPALVFGHSMGSLIALECAARHPQAVRAIGL
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHEECCCCCHHHHHHHHHCCHHHHHHHHH
LATAYPMKVSDALLDAALNREGDAIAMVNQWSISSLASKPSSPGPGAWMHGGSQRLMERI
HHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHH
SARNPGAHVFHTDFSACNGYAHGEEAAAAVACPALFVVGTKDMMTSPKAAQALAGKMKNA
HCCCCCCEEEECCHHHHCCCCCCHHHHHHHHCCEEEEEECHHHHCCCHHHHHHHHHCCCC
RIVTVPSGHAMMGEKPDEVLDALAGFAKTAR
EEEEECCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELKLSGHKAYAYTGGKPFDPALPCAVFVHGAQNDHSVWGLQTRWFANHGFSVLSVDLPG
CCEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEECCEEEEECCCCCEEEEEECCC
HNRSEGAPLTSVEDMADWVMALVAAAGVKAPALVFGHSMGSLIALECAARHPQAVRAIGL
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHEECCCCCHHHHHHHHHCCHHHHHHHHH
LATAYPMKVSDALLDAALNREGDAIAMVNQWSISSLASKPSSPGPGAWMHGGSQRLMERI
HHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCHHHHHHHH
SARNPGAHVFHTDFSACNGYAHGEEAAAAVACPALFVVGTKDMMTSPKAAQALAGKMKNA
HCCCCCCEEEECCHHHHCCCCCCHHHHHHHHCCEEEEEECHHHHCCCHHHHHHHHHCCCC
RIVTVPSGHAMMGEKPDEVLDALAGFAKTAR
EEEEECCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA