Click here to switch to the map view.

The map label for this gene is wrbA [H]

Identifier: 94310075

GI number: 94310075

Start: 1236978

End: 1237607

Strand: Reverse

Name: wrbA [H]

Synonym: Rmet_1130

Alternate gene names: 94310075

Gene position: 1237607-1236978 (Counterclockwise)

Preceding gene: 94310077

Following gene: 94310074

Centisome position: 31.51

GC content: 68.89

Gene sequence:

>630_bases
ATGCACTTGCGCCGACCGCGCCCCGCCAATCCATCCATGACCGACATTCTCGTCCTTTACTACAGCCGCCACGGCGCCAC
CCGCAAACTCGCCGAACTGATCGCCCGCGGCATCGACAGTGTGCCCGGCGCCCAATCCCGCCTGCGCACCGTCCCGCCGG
TTTCCACGGTCTGCGAGGCCACTGCGCCGGACATCCCGCCCGAAGGCGCCCCGTATGCCGAACTGCGCGACCTCGAGGAA
TGCGCCGGCCTGGCGCTGGGCAGCCCGACGCGCTTCGGCAACATGGCCGCGCCGATGAAGTACTTTCTCGACGGCACCGT
CGCCCAGTGGCTTTCCGGCGCGCTGACTGGCAAGCCCGCCTGCGTGTTCACGTCGACGGGCAGCCTGCACGGCGGCCAGG
AGACCACACTGCTCTCGATGATGCTGCCGCTGCTGCACCACGGCATGTTGATCGTCGGCCTGCCCTACGCCGAGTCCGGC
CTGATGACCACCACGGCGGGCGGCACGCCCTACGGCCCGAGCCATTACGCCCACGTGGACAATCAAGGCCCGATCACCGA
GCAGGAAGCATCGCTCGCCACCGCGATGGGCCGCCGCCTGGCAGAAACCGCACTGAAGCTGGCGCGATGA

Upstream 100 bases:

>100_bases
GGTTCCACTCCCTGCGCAGGCGGGCGATGCGTACAGCGGTCATGCGGGGGCTTTCTCCTCGATGGGATGATGGCAAACTC
TCGCAAATATAATACGCGCA

Downstream 100 bases:

>100_bases
ACTCACCGGACACCCATCGGGACGGCTCCCCCGACGCCCTGCACAACCCGGCGCTCTGGAGCCTGAGCCTGGCCAGCCTG
ATCACCCTGATGCTGCTCTG

Product: multimeric flavodoxin WrbA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MHLRRPRPANPSMTDILVLYYSRHGATRKLAELIARGIDSVPGAQSRLRTVPPVSTVCEATAPDIPPEGAPYAELRDLEE
CAGLALGSPTRFGNMAAPMKYFLDGTVAQWLSGALTGKPACVFTSTGSLHGGQETTLLSMMLPLLHHGMLIVGLPYAESG
LMTTTAGGTPYGPSHYAHVDNQGPITEQEASLATAMGRRLAETALKLAR

Sequences:

>Translated_209_residues
MHLRRPRPANPSMTDILVLYYSRHGATRKLAELIARGIDSVPGAQSRLRTVPPVSTVCEATAPDIPPEGAPYAELRDLEE
CAGLALGSPTRFGNMAAPMKYFLDGTVAQWLSGALTGKPACVFTSTGSLHGGQETTLLSMMLPLLHHGMLIVGLPYAESG
LMTTTAGGTPYGPSHYAHVDNQGPITEQEASLATAMGRRLAETALKLAR
>Mature_209_residues
MHLRRPRPANPSMTDILVLYYSRHGATRKLAELIARGIDSVPGAQSRLRTVPPVSTVCEATAPDIPPEGAPYAELRDLEE
CAGLALGSPTRFGNMAAPMKYFLDGTVAQWLSGALTGKPACVFTSTGSLHGGQETTLLSMMLPLLHHGMLIVGLPYAESG
LMTTTAGGTPYGPSHYAHVDNQGPITEQEASLATAMGRRLAETALKLAR

Specific function: Seems To Enhance The Formation And/Or Stability Of Noncovalent Complexes Between The Trp Repressor Protein And Operator-Bearing DNA. However, Wrba Does Not Specifically Influence The Affinity Or Mode Of Binding Of Trpr To Its Operator. It Seems Possible T

COG id: COG0655

COG function: function code R; Multimeric flavodoxin WrbA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787239, Length=203, Percent_Identity=39.4088669950739, Blast_Score=123, Evalue=7e-30,
Organism=Saccharomyces cerevisiae, GI6319849, Length=201, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6320235, Length=199, Percent_Identity=31.1557788944724, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR010089
- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 22165; Mature: 22165

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLRRPRPANPSMTDILVLYYSRHGATRKLAELIARGIDSVPGAQSRLRTVPPVSTVCEA
CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHC
TAPDIPPEGAPYAELRDLEECAGLALGSPTRFGNMAAPMKYFLDGTVAQWLSGALTGKPA
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
CVFTSTGSLHGGQETTLLSMMLPLLHHGMLIVGLPYAESGLMTTTAGGTPYGPSHYAHVD
EEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEECCCCCCCCCCCCEECC
NQGPITEQEASLATAMGRRLAETALKLAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHLRRPRPANPSMTDILVLYYSRHGATRKLAELIARGIDSVPGAQSRLRTVPPVSTVCEA
CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHC
TAPDIPPEGAPYAELRDLEECAGLALGSPTRFGNMAAPMKYFLDGTVAQWLSGALTGKPA
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
CVFTSTGSLHGGQETTLLSMMLPLLHHGMLIVGLPYAESGLMTTTAGGTPYGPSHYAHVD
EEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEECCCCCCCCCCCCEECC
NQGPITEQEASLATAMGRRLAETALKLAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA