| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is fatA [H]
Identifier: 94310049
GI number: 94310049
Start: 1201230
End: 1203416
Strand: Reverse
Name: fatA [H]
Synonym: Rmet_1104
Alternate gene names: 94310049
Gene position: 1203416-1201230 (Counterclockwise)
Preceding gene: 94310054
Following gene: 94310042
Centisome position: 30.64
GC content: 62.19
Gene sequence:
>2187_bases ATGTCCATGCTTGATTCATCCAACAGGCACGCCAGCTTGCGTGCGCGCAATTCGACGCGCTCGGCACGCCCGCTGCCGAT CCTGTCGCCGGTAGCCATTGCCGTGCTGGGCTTCAGCCTTTCGCAGCCAGCGCAGGCACAGTCGCAGGACACAGCCGACG CGACCATGCTGCCGGCTGCTACCGTGGTGGCGGACCGCTCGGGGGAGGCCGTCAAGGTGGAACGGGTCAATGGCGGCGCG CTGGGCGACCGCAAGCCCGTGGATACCCCCTTCTCCGTGGTGGCCGTATCGGGCGACGAGATCCAGCAACGCCTGGCGCA GACGGCCAACGACGTGTTCAAGTACGACCCGGCCGTGTCGGTGCTGGGCGATAACGCGCGGACCGAGAACTCCTACTTCG CTGTGCGCGGCATGCGCGTGGACATGCTCAATGGCACCAAGGTGGATGGGCAGAACTTCGTCACGTGGGATGCCGACATT CCGCTCGAGCCATTCGAACAGGTGGAACTGCTCAAGGGGCTGTCAGGCTTCATGTACGGCTTCGGCTCGCCCGGCGGCAT CATCAACTATGTGGTGAAACGTCCGACGGACAAGCCGTTGCGGGAAGTCACGGTCGGCTACCAGGCCAACAGCGTCTGGA GCGAGAAAGTCGACCTCGGCGGCCGCTTCGGCGTGGATGATCGCTTCGGCTATCGGATCAATGCGGTCAACGAGGATGGC AACACCAACGAGCCGAACGTGCATGTGCGGCGCCAGGCCTTCTCGCTGGCCACGGATTTCCGCATCACCCCGGACCTCAC ATGGAATGCCGACGTCATGTACTGGAAGCGCAAGTCGCAGGGCACGATCTTCGGCCTGTCGTTCGCGTCGGACCTGTCCA TCCCGCCCGCCAGCAGCGTGGCCCGGAATCTGGCACAGCCGTGGTCGTCGCACGAGACCGACACGCTTACCGTAGGCACC GGCGTGGACTACCGTATCAACGATGCCTGGCAGGCCAGCTTCAAGTATCGATTCGCACGCCAGAACCGGCTTAACGCCGA CAGCTTCCTGTACGTCACCAATAGTGCCGGGGATTTCTCCGACACCAACTACCGCTGGAAAACCGCCTACTACTACCAGG CGTACGACGCAATGGTGCAGGGCAAGTTCGAGACGGGTGCGATCAAGCACGATATCGTTGCCGGCATCGGCTACCTGTCG CAGGTGCGCGAACTCGACAACGGTCTTGGCGGCAATGGCATACCCATGGGCACCAGCAATCTGTATAACCCGGTGCCGCT GCCCGAGCAGCCGGACGTGGGCAAGGACTACATCCCGTACCGCGACTACAGGATTCAGCAGAAGTCGGTCTACCTGAGCG ACACGATCCAGTTCACGCCACGTTTTTCGGTACTGGCCGGCGTTCGCTACAACGACTTCACGCAGGACAACTACGATCCG TCGCAAGTCAAAACCTCGCACTACAGCGCCAATCCGTTCACCCCAACCGTTGCGCTGATGTACAAGACCGACGACTTCTC CACGGCCTATTTCAGCTACGTGGAGTCGCTGGAGCAAGGAGGCTCGGCGGGCGTCACCAATGTCAACGCCGGGCAGACCT TTGGTCCGCTCAAGAGCCGGCAATACGAACTGGGATTCAAGACCGACCGCGACAAGTGGGGCGCCAATGTCGCGCTGTTC CGCGTCGAAAAGGGCTACGAGTACACCAACTCGGCCAACTACTTCGTGCAGGACGGCAGCCAGCGTTTCACCGGTCTGGA CACAAGCGGCTGGTTGCGCGTAGCACGCGATGTACGGCTGATGGGCGGTGTGCTTTGGCTCGACACGAAGACCTCTGGCG TCGACGATCCCCAGGTCAATGGCAAGCGCGTGTTTGCCACGCCGAGCTACATCGTGACGGGCCGCATCGAGTACGACACC CCGTTCGCCCCCGGCCTGACGCTGTGGACCGGCGCCAAGGTAACCGGCGATATGTATGTCAACTCGGCCAACACACAGCA CATACCGTCATACACCACCGCCGATGTCGGCGCGCGCTACACCACGCGCATGGCTGGCAAGACGCTGACAGTGCGCGCTG TGGTCAACAATGTGTTTGGACGGCGGTACTGGACGACCACGTACGATGGCTTTGTCCTGCCAGCGTCAACACGCACGTTC CTGGCGAACGCGTCGCTGCAGTTCTGA
Upstream 100 bases:
>100_bases AAATACTAATCATTTGCATTCGCATTAGTATTTCGGTCGAATTCAGCCACGTCCAGGTGCTGAGCCACGCACCAGAACAA CAGCAATCCAGGAAGTCCGT
Downstream 100 bases:
>100_bases CGACCACGCGCACCATCAGCATTCATTGGCTGCCCCGACCTGGCCCGGCCCCCTGCCGCCTGATTTCAGACTCCGGCTGG CACTCGAGGTGGCGCTTCGA
Product: putative ferric siderophore receptor
Products: NA
Alternate protein names: OM2 [H]
Number of amino acids: Translated: 728; Mature: 727
Protein sequence:
>728_residues MSMLDSSNRHASLRARNSTRSARPLPILSPVAIAVLGFSLSQPAQAQSQDTADATMLPAATVVADRSGEAVKVERVNGGA LGDRKPVDTPFSVVAVSGDEIQQRLAQTANDVFKYDPAVSVLGDNARTENSYFAVRGMRVDMLNGTKVDGQNFVTWDADI PLEPFEQVELLKGLSGFMYGFGSPGGIINYVVKRPTDKPLREVTVGYQANSVWSEKVDLGGRFGVDDRFGYRINAVNEDG NTNEPNVHVRRQAFSLATDFRITPDLTWNADVMYWKRKSQGTIFGLSFASDLSIPPASSVARNLAQPWSSHETDTLTVGT GVDYRINDAWQASFKYRFARQNRLNADSFLYVTNSAGDFSDTNYRWKTAYYYQAYDAMVQGKFETGAIKHDIVAGIGYLS QVRELDNGLGGNGIPMGTSNLYNPVPLPEQPDVGKDYIPYRDYRIQQKSVYLSDTIQFTPRFSVLAGVRYNDFTQDNYDP SQVKTSHYSANPFTPTVALMYKTDDFSTAYFSYVESLEQGGSAGVTNVNAGQTFGPLKSRQYELGFKTDRDKWGANVALF RVEKGYEYTNSANYFVQDGSQRFTGLDTSGWLRVARDVRLMGGVLWLDTKTSGVDDPQVNGKRVFATPSYIVTGRIEYDT PFAPGLTLWTGAKVTGDMYVNSANTQHIPSYTTADVGARYTTRMAGKTLTVRAVVNNVFGRRYWTTTYDGFVLPASTRTF LANASLQF
Sequences:
>Translated_728_residues MSMLDSSNRHASLRARNSTRSARPLPILSPVAIAVLGFSLSQPAQAQSQDTADATMLPAATVVADRSGEAVKVERVNGGA LGDRKPVDTPFSVVAVSGDEIQQRLAQTANDVFKYDPAVSVLGDNARTENSYFAVRGMRVDMLNGTKVDGQNFVTWDADI PLEPFEQVELLKGLSGFMYGFGSPGGIINYVVKRPTDKPLREVTVGYQANSVWSEKVDLGGRFGVDDRFGYRINAVNEDG NTNEPNVHVRRQAFSLATDFRITPDLTWNADVMYWKRKSQGTIFGLSFASDLSIPPASSVARNLAQPWSSHETDTLTVGT GVDYRINDAWQASFKYRFARQNRLNADSFLYVTNSAGDFSDTNYRWKTAYYYQAYDAMVQGKFETGAIKHDIVAGIGYLS QVRELDNGLGGNGIPMGTSNLYNPVPLPEQPDVGKDYIPYRDYRIQQKSVYLSDTIQFTPRFSVLAGVRYNDFTQDNYDP SQVKTSHYSANPFTPTVALMYKTDDFSTAYFSYVESLEQGGSAGVTNVNAGQTFGPLKSRQYELGFKTDRDKWGANVALF RVEKGYEYTNSANYFVQDGSQRFTGLDTSGWLRVARDVRLMGGVLWLDTKTSGVDDPQVNGKRVFATPSYIVTGRIEYDT PFAPGLTLWTGAKVTGDMYVNSANTQHIPSYTTADVGARYTTRMAGKTLTVRAVVNNVFGRRYWTTTYDGFVLPASTRTF LANASLQF >Mature_727_residues SMLDSSNRHASLRARNSTRSARPLPILSPVAIAVLGFSLSQPAQAQSQDTADATMLPAATVVADRSGEAVKVERVNGGAL GDRKPVDTPFSVVAVSGDEIQQRLAQTANDVFKYDPAVSVLGDNARTENSYFAVRGMRVDMLNGTKVDGQNFVTWDADIP LEPFEQVELLKGLSGFMYGFGSPGGIINYVVKRPTDKPLREVTVGYQANSVWSEKVDLGGRFGVDDRFGYRINAVNEDGN TNEPNVHVRRQAFSLATDFRITPDLTWNADVMYWKRKSQGTIFGLSFASDLSIPPASSVARNLAQPWSSHETDTLTVGTG VDYRINDAWQASFKYRFARQNRLNADSFLYVTNSAGDFSDTNYRWKTAYYYQAYDAMVQGKFETGAIKHDIVAGIGYLSQ VRELDNGLGGNGIPMGTSNLYNPVPLPEQPDVGKDYIPYRDYRIQQKSVYLSDTIQFTPRFSVLAGVRYNDFTQDNYDPS QVKTSHYSANPFTPTVALMYKTDDFSTAYFSYVESLEQGGSAGVTNVNAGQTFGPLKSRQYELGFKTDRDKWGANVALFR VEKGYEYTNSANYFVQDGSQRFTGLDTSGWLRVARDVRLMGGVLWLDTKTSGVDDPQVNGKRVFATPSYIVTGRIEYDTP FAPGLTLWTGAKVTGDMYVNSANTQHIPSYTTADVGARYTTRMAGKTLTVRAVVNNVFGRRYWTTTYDGFVLPASTRTFL ANASLQF
Specific function: Anguibactin receptor, essential component of the iron uptake system of V.anguillarum [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=769, Percent_Identity=25.3576072821847, Blast_Score=161, Evalue=1e-40, Organism=Escherichia coli, GI1787344, Length=748, Percent_Identity=20.855614973262, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80563; Mature: 80432
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMLDSSNRHASLRARNSTRSARPLPILSPVAIAVLGFSLSQPAQAQSQDTADATMLPAA CCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE TVVADRSGEAVKVERVNGGALGDRKPVDTPFSVVAVSGDEIQQRLAQTANDVFKYDPAVS EEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHEECCCCEE VLGDNARTENSYFAVRGMRVDMLNGTKVDGQNFVTWDADIPLEPFEQVELLKGLSGFMYG EECCCCCCCCCEEEEEEEEEEECCCCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC FGSPGGIINYVVKRPTDKPLREVTVGYQANSVWSEKVDLGGRFGVDDRFGYRINAVNEDG CCCCCCEEEHEEECCCCCCHHHEEECCCCCCCCHHHHCCCCEECCCCCCCEEEEEECCCC NTNEPNVHVRRQAFSLATDFRITPDLTWNADVMYWKRKSQGTIFGLSFASDLSIPPASSV CCCCCCEEEEEEEHHHEECCEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHH ARNLAQPWSSHETDTLTVGTGVDYRINDAWQASFKYRFARQNRLNADSFLYVTNSAGDFS HHHHHCCCCCCCCCEEEEECCCCEEECCCCCCCEEEEEHHCCCCCCCEEEEEECCCCCCC DTNYRWKTAYYYQAYDAMVQGKFETGAIKHDIVAGIGYLSQVRELDNGLGGNGIPMGTSN CCCEEEEEEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LYNPVPLPEQPDVGKDYIPYRDYRIQQKSVYLSDTIQFTPRFSVLAGVRYNDFTQDNYDP CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCH SQVKTSHYSANPFTPTVALMYKTDDFSTAYFSYVESLEQGGSAGVTNVNAGQTFGPLKSR HHEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC QYELGFKTDRDKWGANVALFRVEKGYEYTNSANYFVQDGSQRFTGLDTSGWLRVARDVRL EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHH MGGVLWLDTKTSGVDDPQVNGKRVFATPSYIVTGRIEYDTPFAPGLTLWTGAKVTGDMYV HCCEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCEEEEECCEEECEEEE NSANTQHIPSYTTADVGARYTTRMAGKTLTVRAVVNNVFGRRYWTTTYDGFVLPASTRTF ECCCCCCCCCCCCCCCCCCEEHHHCCCEEEEHHHHHHHHCCEEEEEECCCEEECCCCEEE LANASLQF EECCCCCC >Mature Secondary Structure SMLDSSNRHASLRARNSTRSARPLPILSPVAIAVLGFSLSQPAQAQSQDTADATMLPAA CCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE TVVADRSGEAVKVERVNGGALGDRKPVDTPFSVVAVSGDEIQQRLAQTANDVFKYDPAVS EEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHEECCCCEE VLGDNARTENSYFAVRGMRVDMLNGTKVDGQNFVTWDADIPLEPFEQVELLKGLSGFMYG EECCCCCCCCCEEEEEEEEEEECCCCEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCC FGSPGGIINYVVKRPTDKPLREVTVGYQANSVWSEKVDLGGRFGVDDRFGYRINAVNEDG CCCCCCEEEHEEECCCCCCHHHEEECCCCCCCCHHHHCCCCEECCCCCCCEEEEEECCCC NTNEPNVHVRRQAFSLATDFRITPDLTWNADVMYWKRKSQGTIFGLSFASDLSIPPASSV CCCCCCEEEEEEEHHHEECCEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHH ARNLAQPWSSHETDTLTVGTGVDYRINDAWQASFKYRFARQNRLNADSFLYVTNSAGDFS HHHHHCCCCCCCCCEEEEECCCCEEECCCCCCCEEEEEHHCCCCCCCEEEEEECCCCCCC DTNYRWKTAYYYQAYDAMVQGKFETGAIKHDIVAGIGYLSQVRELDNGLGGNGIPMGTSN CCCEEEEEEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LYNPVPLPEQPDVGKDYIPYRDYRIQQKSVYLSDTIQFTPRFSVLAGVRYNDFTQDNYDP CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCCH SQVKTSHYSANPFTPTVALMYKTDDFSTAYFSYVESLEQGGSAGVTNVNAGQTFGPLKSR HHEEECCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC QYELGFKTDRDKWGANVALFRVEKGYEYTNSANYFVQDGSQRFTGLDTSGWLRVARDVRL EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCEEECCCCCCHHHHHHHHHH MGGVLWLDTKTSGVDDPQVNGKRVFATPSYIVTGRIEYDTPFAPGLTLWTGAKVTGDMYV HCCEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCEEEEECCEEECEEEE NSANTQHIPSYTTADVGARYTTRMAGKTLTVRAVVNNVFGRRYWTTTYDGFVLPASTRTF ECCCCCCCCCCCCCCCCCCEEHHHCCCEEEEHHHHHHHHCCEEEEEECCCEEECCCCEEE LANASLQF EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2830268; 13129954; 2311935 [H]