Click here to switch to the map view.

The map label for this gene is 94309955

Identifier: 94309955

GI number: 94309955

Start: 1100024

End: 1100749

Strand: Reverse

Name: 94309955

Synonym: Rmet_1010

Alternate gene names: NA

Gene position: 1100749-1100024 (Counterclockwise)

Preceding gene: 94309956

Following gene: 94309952

Centisome position: 28.02

GC content: 64.46

Gene sequence:

>726_bases
ATGGCCGCTTCGACCGGTTTCAACCCTTACAAGCGGGACTTGCCCACCGCCTTCGATGCCATCCGCAAACTGCTGGCGGA
CGGCCACGACACGGAGCAGGTCTTCCGCATCATGCGGGCGCTCAACGGCCCGAGCATGCCGAAGAACTACAGCCGTCTGC
TGAGCACGCCGGAAGGCCGCCGCCTTGCTTACCTGCGAGAAGAACTGGCCGAGCGACTCTGCGATCCCACATACATCGCC
AGCTTTGCCCCGGGAACGGTCGGCGCGGCGTACCGTGGTTTTCTCGAAAAGACTGGCTATAGCGCGGATGGGTTGGCGAA
GGTCTCGAACCTGAACCAGGAACCGGTGGTCGAGGACGCGTATATGTGGTTCGGTCGGCGCACACGGGACATCCACGATA
TCTGGCACGTGTTGACCGGCTACCGTGCCGATGAAAGTCTCGGCGAGGCGGCGCTGGTCGCATTCAGCTATGCGCAGACC
GGCGGCAAGGGCTGGGCCTTCATCGCGGTCGCCGCTGCCCTGAAGAGCTGGCGGCTGACCGGCAGCCTCGCGTTCGCGCG
CGCAGTGCTCGAAGGCTACCGCCTGGGCAAGCGGGCGAAGTGGCTGCTGGCCGAAGACTACGATGTGCTGCTGAACGAGC
CGATCGACGCGGCCCGGGAGCGGCTTGGCATCTCGGAAGCAAAGCGATACCTCGCCTGCAATCCGATGGAGGAATGGTCG
GCCTGA

Upstream 100 bases:

>100_bases
CCGCGATCGATACCAGCGTGGATTTTGTCCGAAACGCGGCACTGCAACTGCACGAGCCAGTGTCCGCCTGATCCGCCCGC
CCGAAAATAGGAGCCCAACG

Downstream 100 bases:

>100_bases
GCCCCTGAGCCCGTGCGCCCCTGAGCCGTCCACGCGCCAACAAAAAAGCGACCTCGATGGGTCGCTTTTTGTTTCGGGTC
AGCGGCGCGTCAGACGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MAASTGFNPYKRDLPTAFDAIRKLLADGHDTEQVFRIMRALNGPSMPKNYSRLLSTPEGRRLAYLREELAERLCDPTYIA
SFAPGTVGAAYRGFLEKTGYSADGLAKVSNLNQEPVVEDAYMWFGRRTRDIHDIWHVLTGYRADESLGEAALVAFSYAQT
GGKGWAFIAVAAALKSWRLTGSLAFARAVLEGYRLGKRAKWLLAEDYDVLLNEPIDAARERLGISEAKRYLACNPMEEWS
A

Sequences:

>Translated_241_residues
MAASTGFNPYKRDLPTAFDAIRKLLADGHDTEQVFRIMRALNGPSMPKNYSRLLSTPEGRRLAYLREELAERLCDPTYIA
SFAPGTVGAAYRGFLEKTGYSADGLAKVSNLNQEPVVEDAYMWFGRRTRDIHDIWHVLTGYRADESLGEAALVAFSYAQT
GGKGWAFIAVAAALKSWRLTGSLAFARAVLEGYRLGKRAKWLLAEDYDVLLNEPIDAARERLGISEAKRYLACNPMEEWS
A
>Mature_240_residues
AASTGFNPYKRDLPTAFDAIRKLLADGHDTEQVFRIMRALNGPSMPKNYSRLLSTPEGRRLAYLREELAERLCDPTYIAS
FAPGTVGAAYRGFLEKTGYSADGLAKVSNLNQEPVVEDAYMWFGRRTRDIHDIWHVLTGYRADESLGEAALVAFSYAQTG
GKGWAFIAVAAALKSWRLTGSLAFARAVLEGYRLGKRAKWLLAEDYDVLLNEPIDAARERLGISEAKRYLACNPMEEWSA

Specific function: Unknown

COG id: COG5031

COG function: function code H; Uncharacterized protein involved in ubiquinone biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26867; Mature: 26736

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASTGFNPYKRDLPTAFDAIRKLLADGHDTEQVFRIMRALNGPSMPKNYSRLLSTPEGR
CCCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
RLAYLREELAERLCDPTYIASFAPGTVGAAYRGFLEKTGYSADGLAKVSNLNQEPVVEDA
HHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHH
YMWFGRRTRDIHDIWHVLTGYRADESLGEAALVAFSYAQTGGKGWAFIAVAAALKSWRLT
HHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GSLAFARAVLEGYRLGKRAKWLLAEDYDVLLNEPIDAARERLGISEAKRYLACNPMEEWS
HHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHCCCHHHHHHHHCHHHHHHHHCCCCHHHHC
A
C
>Mature Secondary Structure 
AASTGFNPYKRDLPTAFDAIRKLLADGHDTEQVFRIMRALNGPSMPKNYSRLLSTPEGR
CCCCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
RLAYLREELAERLCDPTYIASFAPGTVGAAYRGFLEKTGYSADGLAKVSNLNQEPVVEDA
HHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHHHH
YMWFGRRTRDIHDIWHVLTGYRADESLGEAALVAFSYAQTGGKGWAFIAVAAALKSWRLT
HHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GSLAFARAVLEGYRLGKRAKWLLAEDYDVLLNEPIDAARERLGISEAKRYLACNPMEEWS
HHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHCCCHHHHHHHHCHHHHHHHHCCCCHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA