| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is ilvC [H]
Identifier: 94309858
GI number: 94309858
Start: 999199
End: 1000215
Strand: Direct
Name: ilvC [H]
Synonym: Rmet_0913
Alternate gene names: 94309858
Gene position: 999199-1000215 (Clockwise)
Preceding gene: 94309857
Following gene: 94309859
Centisome position: 25.44
GC content: 62.73
Gene sequence:
>1017_bases ATGAAAGTGTTTTACGACAAGGACGCCGACCTCTCCCTCATCAAGGGCAAGAACGTCACCATCATCGGCTACGGCTCGCA AGGCCACGCCCACGCGCTGAACCTGAAGGATTCGGGCGTGAACGTGACCGTTGGTCTGCGCAAGAGCGGCGCGTCGTGGA ACAAGGCCGTGAACGCCGGCCTGCAGGTCAAGGAAGTGGCCGAGGCAGTGAAGGGCGCTGACGTGGTCATGATCCTGCTG CCGGACGAGCAGATCGCCGACGTGTACAAGAACGAAGTGCACGCCAACATCAAGGAAGGCGCCGCGCTGGCCTTCGCCCA CGGCTTCAACGTGCACTACGGCGCCGTGATCCCGCGTGCCGACCTGGACGTGATCATGATCGCCCCGAAGGCCCCGGGCC ACACCGTGCGTTCGACGTACGCGCAAGGTGGCGGCGTGCCGCACCTGATCGCCGTGCATCAGAACAAGTCCGGCGCTGCC CGTGACATCGCTCTGTCGTACGCTACCGCCAACGGCGGCGGCCGCGCCGGCATCATCGAGACCAACTTCCGCGAAGAAAC CGAAACCGACCTGTTCGGCGAGCAAGCCGTGCTGTGCGGCGGTACCGTCGAGCTGATCAAGGCTGGCTTCGAAACGCTGG TGGAAGCCGGCTACGCTCCGGAAATGGCCTACTTCGAGTGCCTGCACGAGCTGAAGCTGATCGTCGACCTGATCTACGAA GGCGGCATCGCCAACATGAACTACTCGATCTCGAACAACGCCGAGTATGGTGAGTACGTCACCGGCCCGCGCGTGGTGAC CGAAGAGACCAAGAAGGCCATGAAGCAGTGCCTGAAGGACATCCAGACCGGCGAATACGCCAAGAGCTTCCTGCTCGAGA ACAAGGCTGGCGCCCCGACGCTGATCTCGCGCCGTCGCCTGACCGCCGAGCACCAGATCGAGGAAGTGGGCGGCAAGCTG CGCGCGATGATGCCGTGGATCGCCAAGAACAAGCTGGTTGACCAGTCGAAGAACTAA
Upstream 100 bases:
>100_bases GCAGTATCCCGAAGCAGCGCAGCGCGCTCAGTCCAGAATTGGCAAACGCGCGCTTCGCCGCCACCCAATAAGCAGATTTT GAGAAATTGAAGGAACCATC
Downstream 100 bases:
>100_bases GCAGTACCGGGCGAAGCAGGGCGCCGTGGCGTCCTGCGCACCCTGGAAGCCGCCGGGCTTTCCGCCAGATCCTGTGTTGC AGGAGACATTCTGGCGGGGG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKVFYDKDADLSLIKGKNVTIIGYGSQGHAHALNLKDSGVNVTVGLRKSGASWNKAVNAGLQVKEVAEAVKGADVVMILL PDEQIADVYKNEVHANIKEGAALAFAHGFNVHYGAVIPRADLDVIMIAPKAPGHTVRSTYAQGGGVPHLIAVHQNKSGAA RDIALSYATANGGGRAGIIETNFREETETDLFGEQAVLCGGTVELIKAGFETLVEAGYAPEMAYFECLHELKLIVDLIYE GGIANMNYSISNNAEYGEYVTGPRVVTEETKKAMKQCLKDIQTGEYAKSFLLENKAGAPTLISRRRLTAEHQIEEVGGKL RAMMPWIAKNKLVDQSKN
Sequences:
>Translated_338_residues MKVFYDKDADLSLIKGKNVTIIGYGSQGHAHALNLKDSGVNVTVGLRKSGASWNKAVNAGLQVKEVAEAVKGADVVMILL PDEQIADVYKNEVHANIKEGAALAFAHGFNVHYGAVIPRADLDVIMIAPKAPGHTVRSTYAQGGGVPHLIAVHQNKSGAA RDIALSYATANGGGRAGIIETNFREETETDLFGEQAVLCGGTVELIKAGFETLVEAGYAPEMAYFECLHELKLIVDLIYE GGIANMNYSISNNAEYGEYVTGPRVVTEETKKAMKQCLKDIQTGEYAKSFLLENKAGAPTLISRRRLTAEHQIEEVGGKL RAMMPWIAKNKLVDQSKN >Mature_338_residues MKVFYDKDADLSLIKGKNVTIIGYGSQGHAHALNLKDSGVNVTVGLRKSGASWNKAVNAGLQVKEVAEAVKGADVVMILL PDEQIADVYKNEVHANIKEGAALAFAHGFNVHYGAVIPRADLDVIMIAPKAPGHTVRSTYAQGGGVPHLIAVHQNKSGAA RDIALSYATANGGGRAGIIETNFREETETDLFGEQAVLCGGTVELIKAGFETLVEAGYAPEMAYFECLHELKLIVDLIYE GGIANMNYSISNNAEYGEYVTGPRVVTEETKKAMKQCLKDIQTGEYAKSFLLENKAGAPTLISRRRLTAEHQIEEVGGKL RAMMPWIAKNKLVDQSKN
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=321, Percent_Identity=37.6947040498442, Blast_Score=176, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6323387, Length=285, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=1e-30,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 36444; Mature: 36444
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFYDKDADLSLIKGKNVTIIGYGSQGHAHALNLKDSGVNVTVGLRKSGASWNKAVNAG CCEEECCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHCC LQVKEVAEAVKGADVVMILLPDEQIADVYKNEVHANIKEGAALAFAHGFNVHYGAVIPRA CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCHHCCCEEEEEECCCEEECEEECCC DLDVIMIAPKAPGHTVRSTYAQGGGVPHLIAVHQNKSGAARDIALSYATANGGGRAGIIE CCCEEEECCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEE TNFREETETDLFGEQAVLCGGTVELIKAGFETLVEAGYAPEMAYFECLHELKLIVDLIYE CCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC GGIANMNYSISNNAEYGEYVTGPRVVTEETKKAMKQCLKDIQTGEYAKSFLLENKAGAPT CCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCH LISRRRLTAEHQIEEVGGKLRAMMPWIAKNKLVDQSKN HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKVFYDKDADLSLIKGKNVTIIGYGSQGHAHALNLKDSGVNVTVGLRKSGASWNKAVNAG CCEEECCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHCC LQVKEVAEAVKGADVVMILLPDEQIADVYKNEVHANIKEGAALAFAHGFNVHYGAVIPRA CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCHHCCCEEEEEECCCEEECEEECCC DLDVIMIAPKAPGHTVRSTYAQGGGVPHLIAVHQNKSGAARDIALSYATANGGGRAGIIE CCCEEEECCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEEE TNFREETETDLFGEQAVLCGGTVELIKAGFETLVEAGYAPEMAYFECLHELKLIVDLIYE CCCCCCHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC GGIANMNYSISNNAEYGEYVTGPRVVTEETKKAMKQCLKDIQTGEYAKSFLLENKAGAPT CCCCCEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCH LISRRRLTAEHQIEEVGGKLRAMMPWIAKNKLVDQSKN HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA