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The map label for this gene is yjbI [H]

Identifier: 94309844

GI number: 94309844

Start: 987709

End: 988152

Strand: Direct

Name: yjbI [H]

Synonym: Rmet_0899

Alternate gene names: 94309844

Gene position: 987709-988152 (Clockwise)

Preceding gene: 94309843

Following gene: 94309845

Centisome position: 25.14

GC content: 63.51

Gene sequence:

>444_bases
ATGAGCACCGAATCCACCAACCCGCCCGACGGGCAGTCCAACCAGCCCGAGGAGCAGCGGGAACAGATTACCGCGTACGA
ACTGATCGGCGGCGAGGCGCGCGTGCGCGAACTGGTTGATCGTTTCTACGACCTGATGGACCTGGAGACGGAGTTCGCCG
GCCTGCGCGCGCTGCATCCGCCCTCGCTGGAGGGTTCGCGCGACAAGCTGTTCTGGTTCCTGTGTGGTTGGCTGGGCGGG
CCGAACTACTTTATCGAGCGCTTCGGCCATCCCCGTCTGCGCGCGCGCCATTTGCCGTTCGAGATTGGCACCAGCGAGCG
TGACCAGTGGATGCGTTGCATGGCACTGGCGATGCAGGACGTGGGGCTGTCGGAAGATCTGCAGATGCGGCTGATGCAGG
CGCTTTTCCAGACTGCGGACTGGATGCGCAATGTCCAGCGATAA

Upstream 100 bases:

>100_bases
CATGATCTGCGCTTTTGCGGGCGGCTGGCTCGGATTGCGCGAGGTATTGCGGCAACCGGCGCTGGCGACGCTGCGCGACG
TCTGATTTCCCTGTATCGCC

Downstream 100 bases:

>100_bases
CCGGATGCCGGCGGCCGCGCAGGCCGTGCTCGATTTCTGGTTCGGCTTGCCAGGTGCGCCGGAATGGAACATTTCGCGGC
GCGAATGGTTCACCAAGTGC

Product: globin family protein

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSTESTNPPDGQSNQPEEQREQITAYELIGGEARVRELVDRFYDLMDLETEFAGLRALHPPSLEGSRDKLFWFLCGWLGG
PNYFIERFGHPRLRARHLPFEIGTSERDQWMRCMALAMQDVGLSEDLQMRLMQALFQTADWMRNVQR

Sequences:

>Translated_147_residues
MSTESTNPPDGQSNQPEEQREQITAYELIGGEARVRELVDRFYDLMDLETEFAGLRALHPPSLEGSRDKLFWFLCGWLGG
PNYFIERFGHPRLRARHLPFEIGTSERDQWMRCMALAMQDVGLSEDLQMRLMQALFQTADWMRNVQR
>Mature_146_residues
STESTNPPDGQSNQPEEQREQITAYELIGGEARVRELVDRFYDLMDLETEFAGLRALHPPSLEGSRDKLFWFLCGWLGGP
NYFIERFGHPRLRARHLPFEIGTSERDQWMRCMALAMQDVGLSEDLQMRLMQALFQTADWMRNVQR

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 17183; Mature: 17052

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTESTNPPDGQSNQPEEQREQITAYELIGGEARVRELVDRFYDLMDLETEFAGLRALHP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PSLEGSRDKLFWFLCGWLGGPNYFIERFGHPRLRARHLPFEIGTSERDQWMRCMALAMQD
CCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHCCCCEECCCCCHHHHHHHHHHHHHH
VGLSEDLQMRLMQALFQTADWMRNVQR
CCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STESTNPPDGQSNQPEEQREQITAYELIGGEARVRELVDRFYDLMDLETEFAGLRALHP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PSLEGSRDKLFWFLCGWLGGPNYFIERFGHPRLRARHLPFEIGTSERDQWMRCMALAMQD
CCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCHHHCCCCEECCCCCHHHHHHHHHHHHHH
VGLSEDLQMRLMQALFQTADWMRNVQR
CCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]