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The map label for this gene is 94309827

Identifier: 94309827

GI number: 94309827

Start: 965698

End: 966642

Strand: Reverse

Name: 94309827

Synonym: Rmet_0882

Alternate gene names: NA

Gene position: 966642-965698 (Counterclockwise)

Preceding gene: 94309828

Following gene: 94309826

Centisome position: 24.61

GC content: 64.55

Gene sequence:

>945_bases
ATGACACACGATAACTATCCACGCGATCTCATTGGCTACGGCGCGCAGCCACCGCACGCCCGCTGGCCGGGCGGCGCGCG
CATCGCGCTGCAGTTCGTGCTCAATTACGAGGAAGGCGGTGAGAACTGCGTGCTGCACGGCGACGCGGCATCCGAGCAGT
TCCTGTCCGAGATCGTTGGTGCCGCCGCCTATCCGGCGCGACACATGAGCATGGAGGGCATCTACGAATACGGCTCGCGC
GCCGGCGTCTGGCGCCTGCTGCGCGAGTTCGAGCAACGCAAGCTGCCGCTGACGGTCTTCGGCGTGTCGATGGCGCTGCA
GCGCCATCCGGAACTGACCCGCGCGTTCGTCGAACTCGGTCACGAGATCGCCTGCCACGGCTACCGCTGGATTCACTACC
AGGGCATCGACGAAGCCATCGAGCGCGAGCACATGCGCATCGGCATGGAGATCATCAAGGAGCTGACCGGCGAGATGCCG
CTGGGCTGGTACACCGGCCGCGACAGCCCCAACACGCGCCGGCTGGTGGTCGAGCACGGCGGGCTGCTCTATGACGCCGA
CTACTACGGCGACGACCTGCCCTTCTGGACCGATGTGGAAATCACGGGTGGCCAGAAGAAGCCCCATCTGGTGGTGCCGT
ACACACTCGACACCAACGACATGCGCTTCGCCACGCCCCAGGGCTTCAACACGGGCGAGCAGTTCTTCCAGTATCTGAAG
GATGCCTTCGACGTGCTCTACGCCGAAGGCGATCCGCAGGGCCAGGACCGCCCGAAGATGCTGTCGATCGGCATGCATTG
CCGCTTGCTGGGCCGCCCGGGACGTTTCCGCGCGCTGCAGCGATTCCTGGATTACGTGCAGTCTCACGACAAGGTGTGGA
TCTGCAGGCGTGTCGATATCGCCCGCCACTGGATTGAAACCCACCCCTATCGGAGCCACGCATGA

Upstream 100 bases:

>100_bases
CCTACGGGAGCGTTTCTGGCATACGCCTTGCGTAAGTCCGGTCGCTTCGATGCATGGCTCCCGCGGGGCGGGCAGTTTCT
CCTGAAGCAGAAATAAAGAG

Downstream 100 bases:

>100_bases
GCCAGACCACCTACACGATCGCCCAACTCAACACGATGCCCGAGGCCGAATTCATCGCGGTCCTCGGCGGCATCTACGAA
CACTCCCCCTGGTTCGCCGA

Product: putative xylanase/chitin deacetylase

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Family; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Allantoinase; Uricase; Polysaccharide Deacetylase Domain Protein; Hydrolase; Deacetylase

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTHDNYPRDLIGYGAQPPHARWPGGARIALQFVLNYEEGGENCVLHGDAASEQFLSEIVGAAAYPARHMSMEGIYEYGSR
AGVWRLLREFEQRKLPLTVFGVSMALQRHPELTRAFVELGHEIACHGYRWIHYQGIDEAIEREHMRIGMEIIKELTGEMP
LGWYTGRDSPNTRRLVVEHGGLLYDADYYGDDLPFWTDVEITGGQKKPHLVVPYTLDTNDMRFATPQGFNTGEQFFQYLK
DAFDVLYAEGDPQGQDRPKMLSIGMHCRLLGRPGRFRALQRFLDYVQSHDKVWICRRVDIARHWIETHPYRSHA

Sequences:

>Translated_314_residues
MTHDNYPRDLIGYGAQPPHARWPGGARIALQFVLNYEEGGENCVLHGDAASEQFLSEIVGAAAYPARHMSMEGIYEYGSR
AGVWRLLREFEQRKLPLTVFGVSMALQRHPELTRAFVELGHEIACHGYRWIHYQGIDEAIEREHMRIGMEIIKELTGEMP
LGWYTGRDSPNTRRLVVEHGGLLYDADYYGDDLPFWTDVEITGGQKKPHLVVPYTLDTNDMRFATPQGFNTGEQFFQYLK
DAFDVLYAEGDPQGQDRPKMLSIGMHCRLLGRPGRFRALQRFLDYVQSHDKVWICRRVDIARHWIETHPYRSHA
>Mature_313_residues
THDNYPRDLIGYGAQPPHARWPGGARIALQFVLNYEEGGENCVLHGDAASEQFLSEIVGAAAYPARHMSMEGIYEYGSRA
GVWRLLREFEQRKLPLTVFGVSMALQRHPELTRAFVELGHEIACHGYRWIHYQGIDEAIEREHMRIGMEIIKELTGEMPL
GWYTGRDSPNTRRLVVEHGGLLYDADYYGDDLPFWTDVEITGGQKKPHLVVPYTLDTNDMRFATPQGFNTGEQFFQYLKD
AFDVLYAEGDPQGQDRPKMLSIGMHCRLLGRPGRFRALQRFLDYVQSHDKVWICRRVDIARHWIETHPYRSHA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36210; Mature: 36079

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDNYPRDLIGYGAQPPHARWPGGARIALQFVLNYEEGGENCVLHGDAASEQFLSEIVG
CCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHH
AAAYPARHMSMEGIYEYGSRAGVWRLLREFEQRKLPLTVFGVSMALQRHPELTRAFVELG
HHCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHCHHHHHHHHHHC
HEIACHGYRWIHYQGIDEAIEREHMRIGMEIIKELTGEMPLGWYTGRDSPNTRRLVVEHG
CCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEECC
GLLYDADYYGDDLPFWTDVEITGGQKKPHLVVPYTLDTNDMRFATPQGFNTGEQFFQYLK
CEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHH
DAFDVLYAEGDPQGQDRPKMLSIGMHCRLLGRPGRFRALQRFLDYVQSHDKVWICRRVDI
HHHHEEECCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHH
ARHWIETHPYRSHA
HHHHHHCCCCCCCC
>Mature Secondary Structure 
THDNYPRDLIGYGAQPPHARWPGGARIALQFVLNYEEGGENCVLHGDAASEQFLSEIVG
CCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEECCHHHHHHHHHHHH
AAAYPARHMSMEGIYEYGSRAGVWRLLREFEQRKLPLTVFGVSMALQRHPELTRAFVELG
HHCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHCHHHHHHHHHHC
HEIACHGYRWIHYQGIDEAIEREHMRIGMEIIKELTGEMPLGWYTGRDSPNTRRLVVEHG
CCEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEECC
GLLYDADYYGDDLPFWTDVEITGGQKKPHLVVPYTLDTNDMRFATPQGFNTGEQFFQYLK
CEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCHHHHHHHHH
DAFDVLYAEGDPQGQDRPKMLSIGMHCRLLGRPGRFRALQRFLDYVQSHDKVWICRRVDI
HHHHEEECCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEHHHH
ARHWIETHPYRSHA
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA