| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is gmk [H]
Identifier: 94309801
GI number: 94309801
Start: 936651
End: 937301
Strand: Direct
Name: gmk [H]
Synonym: Rmet_0856
Alternate gene names: 94309801
Gene position: 936651-937301 (Clockwise)
Preceding gene: 94309800
Following gene: 94309802
Centisome position: 23.84
GC content: 61.9
Gene sequence:
>651_bases ATGAGCGAAACGACCCACACCGCCATCGATACCGCCTATCCGGGCAACCTGTTCATGGTGGTGGCCCCGTCCGGGGCCGG CAAATCCACGCTGGTCAACGCGCTGCTGGCGCAGGACAAGGCAATCCGCCTGTCGATCTCGCACACCACGCGCAGTCCGC GTCCCGGTGAGCAGAACGGCCGCGAGTACCACTTCATCTCCGTGGACGAGTTCCGCGCCGCGCGCGATCGGGGCGAATTC CTGGAGTGGGCGGAAGTGCACGGCAATTACTACGCCACGTCCCGCGTCTGGATCGAGGAGCAGATGGCCCAGGGTACCGA CGTGCTGCTGGAGATCGACTGGCAGGGTGCGCAGCAGGTGCACAAGCGGTTTTCGAACGCCGTCGAGATCTTCATCCTGC CGCCGTCGCTGACGGCGCTGGAAGAACGCCTCAAGAAGCGGGGTCAGGACGAGCCCAATGTGATCGTCCGCCGCTTGCTT GCTGCGGGTAGCGAGATGTCGCATGCATCGGAGTCCGATTACGTGATCATCAACGAGGTATTCGATGACGCGTTGAAGCA GCTGCAGAACGTCGTTCATGCAACCCGTTTGCGCTTTTCGTCGCAGAAAGCACGGCACGCCGAGTTGTTCATCGAGCTCG GAATTCACTAA
Upstream 100 bases:
>100_bases GGCTCGAAAGCCGCCGCGAAGGAACTCGCCGATGCCTCGATGGAGCTCAAGCTCCTGATCGAGCAGATGCGCGAGCAGAT TCAAAACCTCGAATAAGATC
Downstream 100 bases:
>100_bases AGCAGGCGCGCGGCCGGAAGGTTCCGGCCGCGTGCTGTAAAATACTGGCCTGTCGAACAGGTTTCATCCCAAGGTGGATT TGATATGGCGCGTATTACCG
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSETTHTAIDTAYPGNLFMVVAPSGAGKSTLVNALLAQDKAIRLSISHTTRSPRPGEQNGREYHFISVDEFRAARDRGEF LEWAEVHGNYYATSRVWIEEQMAQGTDVLLEIDWQGAQQVHKRFSNAVEIFILPPSLTALEERLKKRGQDEPNVIVRRLL AAGSEMSHASESDYVIINEVFDDALKQLQNVVHATRLRFSSQKARHAELFIELGIH
Sequences:
>Translated_216_residues MSETTHTAIDTAYPGNLFMVVAPSGAGKSTLVNALLAQDKAIRLSISHTTRSPRPGEQNGREYHFISVDEFRAARDRGEF LEWAEVHGNYYATSRVWIEEQMAQGTDVLLEIDWQGAQQVHKRFSNAVEIFILPPSLTALEERLKKRGQDEPNVIVRRLL AAGSEMSHASESDYVIINEVFDDALKQLQNVVHATRLRFSSQKARHAELFIELGIH >Mature_215_residues SETTHTAIDTAYPGNLFMVVAPSGAGKSTLVNALLAQDKAIRLSISHTTRSPRPGEQNGREYHFISVDEFRAARDRGEFL EWAEVHGNYYATSRVWIEEQMAQGTDVLLEIDWQGAQQVHKRFSNAVEIFILPPSLTALEERLKKRGQDEPNVIVRRLLA AGSEMSHASESDYVIINEVFDDALKQLQNVVHATRLRFSSQKARHAELFIELGIH
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=172, Percent_Identity=39.5348837209302, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI4504221, Length=172, Percent_Identity=39.5348837209302, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI226874831, Length=175, Percent_Identity=38.8571428571429, Blast_Score=129, Evalue=3e-30, Organism=Homo sapiens, GI4505237, Length=179, Percent_Identity=29.0502793296089, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI262118259, Length=179, Percent_Identity=29.0502793296089, Blast_Score=74, Evalue=7e-14, Organism=Homo sapiens, GI262118263, Length=179, Percent_Identity=29.0502793296089, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI262118255, Length=179, Percent_Identity=29.0502793296089, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI38570142, Length=179, Percent_Identity=28.4916201117318, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI14780902, Length=192, Percent_Identity=25.5208333333333, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790080, Length=201, Percent_Identity=52.2388059701493, Blast_Score=211, Evalue=4e-56, Organism=Caenorhabditis elegans, GI193203132, Length=184, Percent_Identity=32.6086956521739, Blast_Score=104, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17508835, Length=184, Percent_Identity=32.6086956521739, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6320662, Length=182, Percent_Identity=39.5604395604396, Blast_Score=140, Evalue=2e-34, Organism=Drosophila melanogaster, GI21356141, Length=179, Percent_Identity=39.6648044692737, Blast_Score=121, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 24341; Mature: 24209
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETTHTAIDTAYPGNLFMVVAPSGAGKSTLVNALLAQDKAIRLSISHTTRSPRPGEQNG CCCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC REYHFISVDEFRAARDRGEFLEWAEVHGNYYATSRVWIEEQMAQGTDVLLEIDWQGAQQV CEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEEECCCCHHHH HKRFSNAVEIFILPPSLTALEERLKKRGQDEPNVIVRRLLAAGSEMSHASESDYVIINEV HHHHCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHH FDDALKQLQNVVHATRLRFSSQKARHAELFIELGIH HHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCC >Mature Secondary Structure SETTHTAIDTAYPGNLFMVVAPSGAGKSTLVNALLAQDKAIRLSISHTTRSPRPGEQNG CCCCCCEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCC REYHFISVDEFRAARDRGEFLEWAEVHGNYYATSRVWIEEQMAQGTDVLLEIDWQGAQQV CEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCEEEEEECCCCHHHH HKRFSNAVEIFILPPSLTALEERLKKRGQDEPNVIVRRLLAAGSEMSHASESDYVIINEV HHHHCCCEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHH FDDALKQLQNVVHATRLRFSSQKARHAELFIELGIH HHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA