| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is yhhW [C]
Identifier: 94309743
GI number: 94309743
Start: 874050
End: 874973
Strand: Reverse
Name: yhhW [C]
Synonym: Rmet_0798
Alternate gene names: 94309743
Gene position: 874973-874050 (Counterclockwise)
Preceding gene: 94309748
Following gene: 94309742
Centisome position: 22.27
GC content: 68.29
Gene sequence:
>924_bases ATGGACACCACCCGCATCCAGACCGTTCCGGCAACCGCCACGGAAACCGTGCAGCGCTCGCGCAGCGTGGACCGCGTGGT TCGCGGCATCGCCACATCCGACGGCGCCGGCGTCAAGCTGACCCGCGTGCTGACGCAGAACCTGCAGCGCAGGCTCGATC CGTTCCTGATGCTCGATGCCTTTGGCACCGACAACAAGGACGACTACATCGGCGGCTTCCCCGATCACCCGCACCGCGGC TTCGAGACCATCACCTACATGCTGGCCGGCCGTATGCGTCACCGCGACAGCGCCGGCCATGAAGGCCTGCTGGAAAACGG CGGCGCGCAATGGATGGTGGCGGGCGCCGGCGTGGTGCACTCGGAACTGCCCGAGCAGGAGGACGGCCGCATGGAAGGCT TCCAGCTCTGGCTGAACCTGCCGGCCGCGGACAAGATGACGACGCCGTGGTATCGCGACATGCCGGCGTCGGCCATCCCG ACCGTGGCGCTGCCATCGGGCGGCACCGTGCGCGTCCTGGCGGGCGCCTCGCATGGGGTGGCAGGTGCGGTGACGCGGCC GGTTACCCAGCCGCTGTACCTGGACGTGCACCTGCCCGCGGGCCAGACGTTCGCGCAGACGCTGACGGCCGGCCATAACG CGTTCCTCTACGTCTATCGCGGCGCGGTCACCGTGGGCGACGCCGATGGCGCCGTGGTTGAGGCCCAGCGCATGGGGGTG CTCGACAACGCCACCCGCGCCGACGGGGTCGTGATCAAGGCCGATGAGGACGCGCGCTTCCTGCTGATCGCAGGTCAGCC GCTGAACGAGCCGATCGCGCAGTACGGCCCGTTCGTGATGAATACGCAGGATCAGATCTACCAGACCCTGGCAGACTTCC GCGATGGCCGTTTCGCCACGATTCCGGCGAATCAGGCCAGTTGA
Upstream 100 bases:
>100_bases CAATCTGTTGCCTCCTGCCCCACTACCGCTTTGGCGCCAAAGCCTTACATTGAGTGGGTAGATCCGACGGCCAGAGCGCC GTCTCAATGGAGAGAAATTC
Downstream 100 bases:
>100_bases CCTGACCGTCTGAGCGCGTCGCCCGACGCGCCCGACGTGCACCCAGCCGCCGCTGGGTCGGGGTTTCCCCGGCCCAGCGG CGGTTTTTCTTTGCCACTGT
Product: putative Pirin-like protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA3240 [H]
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MDTTRIQTVPATATETVQRSRSVDRVVRGIATSDGAGVKLTRVLTQNLQRRLDPFLMLDAFGTDNKDDYIGGFPDHPHRG FETITYMLAGRMRHRDSAGHEGLLENGGAQWMVAGAGVVHSELPEQEDGRMEGFQLWLNLPAADKMTTPWYRDMPASAIP TVALPSGGTVRVLAGASHGVAGAVTRPVTQPLYLDVHLPAGQTFAQTLTAGHNAFLYVYRGAVTVGDADGAVVEAQRMGV LDNATRADGVVIKADEDARFLLIAGQPLNEPIAQYGPFVMNTQDQIYQTLADFRDGRFATIPANQAS
Sequences:
>Translated_307_residues MDTTRIQTVPATATETVQRSRSVDRVVRGIATSDGAGVKLTRVLTQNLQRRLDPFLMLDAFGTDNKDDYIGGFPDHPHRG FETITYMLAGRMRHRDSAGHEGLLENGGAQWMVAGAGVVHSELPEQEDGRMEGFQLWLNLPAADKMTTPWYRDMPASAIP TVALPSGGTVRVLAGASHGVAGAVTRPVTQPLYLDVHLPAGQTFAQTLTAGHNAFLYVYRGAVTVGDADGAVVEAQRMGV LDNATRADGVVIKADEDARFLLIAGQPLNEPIAQYGPFVMNTQDQIYQTLADFRDGRFATIPANQAS >Mature_307_residues MDTTRIQTVPATATETVQRSRSVDRVVRGIATSDGAGVKLTRVLTQNLQRRLDPFLMLDAFGTDNKDDYIGGFPDHPHRG FETITYMLAGRMRHRDSAGHEGLLENGGAQWMVAGAGVVHSELPEQEDGRMEGFQLWLNLPAADKMTTPWYRDMPASAIP TVALPSGGTVRVLAGASHGVAGAVTRPVTQPLYLDVHLPAGQTFAQTLTAGHNAFLYVYRGAVTVGDADGAVVEAQRMGV LDNATRADGVVIKADEDARFLLIAGQPLNEPIAQYGPFVMNTQDQIYQTLADFRDGRFATIPANQAS
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=283, Percent_Identity=39.5759717314488, Blast_Score=195, Evalue=4e-50, Organism=Homo sapiens, GI4505823, Length=283, Percent_Identity=39.5759717314488, Blast_Score=195, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 33132; Mature: 33132
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTTRIQTVPATATETVQRSRSVDRVVRGIATSDGAGVKLTRVLTQNLQRRLDPFLMLDA CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCEEEEEE FGTDNKDDYIGGFPDHPHRGFETITYMLAGRMRHRDSAGHEGLLENGGAQWMVAGAGVVH CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEECCCCHH SELPEQEDGRMEGFQLWLNLPAADKMTTPWYRDMPASAIPTVALPSGGTVRVLAGASHGV HCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEECCCCEEEEEECCCCCC AGAVTRPVTQPLYLDVHLPAGQTFAQTLTAGHNAFLYVYRGAVTVGDADGAVVEAQRMGV CCHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECEEEECCCCCCEEEHHHCCC LDNATRADGVVIKADEDARFLLIAGQPLNEPIAQYGPFVMNTQDQIYQTLADFRDGRFAT CCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHCCEEECCHHHHHHHHHHHCCCCEEE IPANQAS CCCCCCC >Mature Secondary Structure MDTTRIQTVPATATETVQRSRSVDRVVRGIATSDGAGVKLTRVLTQNLQRRLDPFLMLDA CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCEEEEEE FGTDNKDDYIGGFPDHPHRGFETITYMLAGRMRHRDSAGHEGLLENGGAQWMVAGAGVVH CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEECCCCHH SELPEQEDGRMEGFQLWLNLPAADKMTTPWYRDMPASAIPTVALPSGGTVRVLAGASHGV HCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHCCCCCCCCEEEECCCCEEEEEECCCCCC AGAVTRPVTQPLYLDVHLPAGQTFAQTLTAGHNAFLYVYRGAVTVGDADGAVVEAQRMGV CCHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEEEECEEEECCCCCCEEEHHHCCC LDNATRADGVVIKADEDARFLLIAGQPLNEPIAQYGPFVMNTQDQIYQTLADFRDGRFAT CCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHHHCCEEECCHHHHHHHHHHHCCCCEEE IPANQAS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]