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The map label for this gene is yebC [C]

Identifier: 94309730

GI number: 94309730

Start: 861416

End: 862141

Strand: Reverse

Name: yebC [C]

Synonym: Rmet_0785

Alternate gene names: 94309730

Gene position: 862141-861416 (Counterclockwise)

Preceding gene: 94309732

Following gene: 94309729

Centisome position: 21.95

GC content: 62.81

Gene sequence:

>726_bases
ATGGCCGGTCATTCCAAATGGGCCAACATCAAACACAAGAAAGCCGCCGCTGACGCCAAGCGCGGCAAGGTCTGGACGCG
CCTGATCAAGGAAATCACCGTTGCCGCCAAGCTCGGCGGCGGCGAATTCGACTCCAACCCGCGTCTGCGCCTGGCCATGG
AAAAGGCCATGGACGCGAACATGCCCAAGGACAACATCCAGCGCGCGATCCAGCGCGGCGTGGGTGGCCTGGAAGGCGCA
AACTACGAAGAAATCCGTTACGAAGGCTACGGCCTGGCCGGTGCCGCCATCATCGTCGACTGCCTGACCGATAACCGCAC
CCGTACCGTGGCCGAAGTCCGCCACGCGTTCTCGAAGCACGGCGGCAACATGGGCACCGAAGGTTCGGTGGCCTTCATGT
TCACGCACTGCGGCCAGTTCCTGTTTGCCCCGGGCACCCCGGAAGACAAGCTGATGGACGCCGCGCTGGAAGCCGGCGCG
GACGACGTGGTCACCAACGACGACGAATCGATCGAAGTGACTTGCCCGCCCAATGACTTCGGCGCGGTCAAGGCCGCGCT
GGAAGCCGCCGGCTTCAAGGCCGAAGTGGCCGACGTGGTAATGAAGCCGCAGAACGAAGTGAGCTTCGTCGGCGACGACG
CCGTCAAGATGCAGAAGCTGCTGGACGCGCTGGAAAACCTGGACGACGTACAGGAAGTCTTCACCAACGCGGTGGTCGAG
GAATAA

Upstream 100 bases:

>100_bases
CCGGATTGTCAGCAACTGTCAAGGAAGCCTGATCCACGCCCGCGCCGCGCCAACAGCGGCCGCACGCCGCACGATTCGTT
TTTGCGCCACGGAGAGAAAC

Downstream 100 bases:

>100_bases
GCCTCTCGCGCCGCGCCCCATGGCGGCAGCCCGGCACCAGCCAGCTGCCGCTTTTCGCATGCGTTTCTTTTCTGGCAGTG
GATCATGAAAGTTTTGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MAGHSKWANIKHKKAAADAKRGKVWTRLIKEITVAAKLGGGEFDSNPRLRLAMEKAMDANMPKDNIQRAIQRGVGGLEGA
NYEEIRYEGYGLAGAAIIVDCLTDNRTRTVAEVRHAFSKHGGNMGTEGSVAFMFTHCGQFLFAPGTPEDKLMDAALEAGA
DDVVTNDDESIEVTCPPNDFGAVKAALEAAGFKAEVADVVMKPQNEVSFVGDDAVKMQKLLDALENLDDVQEVFTNAVVE
E

Sequences:

>Translated_241_residues
MAGHSKWANIKHKKAAADAKRGKVWTRLIKEITVAAKLGGGEFDSNPRLRLAMEKAMDANMPKDNIQRAIQRGVGGLEGA
NYEEIRYEGYGLAGAAIIVDCLTDNRTRTVAEVRHAFSKHGGNMGTEGSVAFMFTHCGQFLFAPGTPEDKLMDAALEAGA
DDVVTNDDESIEVTCPPNDFGAVKAALEAAGFKAEVADVVMKPQNEVSFVGDDAVKMQKLLDALENLDDVQEVFTNAVVE
E
>Mature_240_residues
AGHSKWANIKHKKAAADAKRGKVWTRLIKEITVAAKLGGGEFDSNPRLRLAMEKAMDANMPKDNIQRAIQRGVGGLEGAN
YEEIRYEGYGLAGAAIIVDCLTDNRTRTVAEVRHAFSKHGGNMGTEGSVAFMFTHCGQFLFAPGTPEDKLMDAALEAGAD
DVVTNDDESIEVTCPPNDFGAVKAALEAAGFKAEVADVVMKPQNEVSFVGDDAVKMQKLLDALENLDDVQEVFTNAVVEE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=245, Percent_Identity=26.530612244898, Blast_Score=99, Evalue=3e-21,
Organism=Escherichia coli, GI1788171, Length=241, Percent_Identity=56.4315352697095, Blast_Score=274, Evalue=4e-75,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=39.0557939914163, Blast_Score=143, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17556100, Length=250, Percent_Identity=23.2, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6321458, Length=266, Percent_Identity=33.8345864661654, Blast_Score=125, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=28.1124497991968, Blast_Score=90, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 25960; Mature: 25828

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHKKAAADAKRGKVWTRLIKEITVAAKLGGGEFDSNPRLRLAMEKAMDAN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHCCC
MPKDNIQRAIQRGVGGLEGANYEEIRYEGYGLAGAAIIVDCLTDNRTRTVAEVRHAFSKH
CCHHHHHHHHHHCCCCCCCCCHHHHEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GGNMGTEGSVAFMFTHCGQFLFAPGTPEDKLMDAALEAGADDVVTNDDESIEVTCPPNDF
CCCCCCCCCHHHHEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHH
GAVKAALEAAGFKAEVADVVMKPQNEVSFVGDDAVKMQKLLDALENLDDVQEVFTNAVVE
HHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHCC
E
C
>Mature Secondary Structure 
AGHSKWANIKHKKAAADAKRGKVWTRLIKEITVAAKLGGGEFDSNPRLRLAMEKAMDAN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHCCC
MPKDNIQRAIQRGVGGLEGANYEEIRYEGYGLAGAAIIVDCLTDNRTRTVAEVRHAFSKH
CCHHHHHHHHHHCCCCCCCCCHHHHEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC
GGNMGTEGSVAFMFTHCGQFLFAPGTPEDKLMDAALEAGADDVVTNDDESIEVTCPPNDF
CCCCCCCCCHHHHEECCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHH
GAVKAALEAAGFKAEVADVVMKPQNEVSFVGDDAVKMQKLLDALENLDDVQEVFTNAVVE
HHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA