| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is phnI [H]
Identifier: 94309709
GI number: 94309709
Start: 842040
End: 843161
Strand: Reverse
Name: phnI [H]
Synonym: Rmet_0764
Alternate gene names: 94309709
Gene position: 843161-842040 (Counterclockwise)
Preceding gene: 94309710
Following gene: 94309708
Centisome position: 21.46
GC content: 64.88
Gene sequence:
>1122_bases ATGTACGTAGCCGTCAAAGGGGGCGAACGCGCCATCCTGAACTCCTACCAGATGCTCGACGCCTATCGTCGAGGGGACAC GTCGGTACCGGAGATCACACTCGAACAAATCCGCGAACAGATGCCGCTGGCGGTATCGCGCGTGATGGCCGAGGGTTCGC TCTATGACCCACACCTGGCCGCGCTCGCGCTCAAGCAGGCTGCCGGCGATCAAATCGAAGCGATCTTCCTGCTGCGTGCC TATCGCACCACGCTCGCGCGCTTCGGTTATACCCAGGCGCTGGATACCGGCAAGATGTGCCTGCAGCGCCGAATCTCGTC AACGTTCAAGGACGTGCCCGGCGGACAAGTCCTCGGACCGACCTACGACTACACGCAGCGGCTGCTCGACTTCACGCTCG AAGCGGGCCGCGACCCCGCGCCGCTACCGCCCTCGCCAGAACCGCTTGCTCCGAACATGCCGCGCGTCACCAGCCTGCTG GAAGCCGAATCGCTGGTGGAAGCCGACGCGATTCCTCCGGGCGACCCCGCCCCGCCGGACCTGACACGCGAACCGCTGAC GTTCCCCGCCGAGCGTCCCGCACGCCTGCAGAACCTGGCGCGCGCCGATGAAGGCTTTCTGCTGTCGATGGGCTACTCCA CGCAGCGCGGCTATGGCAATTCGCACCCGTTCGCCGGCGAGATCCGCTATGGCAGCACCGAAGTCGAGATGTTCATCGAG GAACTCGGCTTCGCCATCACCATCGGTGAAGTGGAAGTGACTGAATGCCAGATGGTGAGCCAGTTTGCGGGCAACGCCGA CGAAGCGCCGCGACTCACGCGTGGCTACGGTCTCGTGTTCGGCTACAACGAGCGCAAGGCGATGTCGATGGCGCTGGCCG ATCGCGCGATGCGCGCGGAAGAACTCGGCGAGGCAGGTGACGCACCGGCCAACAATATCGAATTCATGCTGTACCACAGC GACAACGTCGAAGCGTCCGGCTTCGTGCAGCACCTGAAGCTGCCGCACTACGTGGACTTCCAGGCCAACCTCGAACTGCT GCGGCGGCTGCGCGCCGAGCAACAGGGCGCGGCCACCGATGCGCCGGCCGAAGACCAACCCCAGGAGGAGTCGCTGGCAT GA
Upstream 100 bases:
>100_bases CGCGCCAACAACGCGGGCTTTCCGCTCGGCGTGGACCTGCTGCTGGCCAGCGGCGACGAATTCTGCGCGATGACGCGCAC CACGCACGTGGAGGACTGAG
Downstream 100 bases:
>100_bases ACGCCACCGCTACCGTCGCACGCGACGAACACTACAACTTCGCCTATCTGGACGAATCGACCAAGCGGATGCTGCGCCGG GCGCTGCTCAAGGCCGTTGC
Product: carbon-phosphorus lyase complex subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MYVAVKGGERAILNSYQMLDAYRRGDTSVPEITLEQIREQMPLAVSRVMAEGSLYDPHLAALALKQAAGDQIEAIFLLRA YRTTLARFGYTQALDTGKMCLQRRISSTFKDVPGGQVLGPTYDYTQRLLDFTLEAGRDPAPLPPSPEPLAPNMPRVTSLL EAESLVEADAIPPGDPAPPDLTREPLTFPAERPARLQNLARADEGFLLSMGYSTQRGYGNSHPFAGEIRYGSTEVEMFIE ELGFAITIGEVEVTECQMVSQFAGNADEAPRLTRGYGLVFGYNERKAMSMALADRAMRAEELGEAGDAPANNIEFMLYHS DNVEASGFVQHLKLPHYVDFQANLELLRRLRAEQQGAATDAPAEDQPQEESLA
Sequences:
>Translated_373_residues MYVAVKGGERAILNSYQMLDAYRRGDTSVPEITLEQIREQMPLAVSRVMAEGSLYDPHLAALALKQAAGDQIEAIFLLRA YRTTLARFGYTQALDTGKMCLQRRISSTFKDVPGGQVLGPTYDYTQRLLDFTLEAGRDPAPLPPSPEPLAPNMPRVTSLL EAESLVEADAIPPGDPAPPDLTREPLTFPAERPARLQNLARADEGFLLSMGYSTQRGYGNSHPFAGEIRYGSTEVEMFIE ELGFAITIGEVEVTECQMVSQFAGNADEAPRLTRGYGLVFGYNERKAMSMALADRAMRAEELGEAGDAPANNIEFMLYHS DNVEASGFVQHLKLPHYVDFQANLELLRRLRAEQQGAATDAPAEDQPQEESLA >Mature_373_residues MYVAVKGGERAILNSYQMLDAYRRGDTSVPEITLEQIREQMPLAVSRVMAEGSLYDPHLAALALKQAAGDQIEAIFLLRA YRTTLARFGYTQALDTGKMCLQRRISSTFKDVPGGQVLGPTYDYTQRLLDFTLEAGRDPAPLPPSPEPLAPNMPRVTSLL EAESLVEADAIPPGDPAPPDLTREPLTFPAERPARLQNLARADEGFLLSMGYSTQRGYGNSHPFAGEIRYGSTEVEMFIE ELGFAITIGEVEVTECQMVSQFAGNADEAPRLTRGYGLVFGYNERKAMSMALADRAMRAEELGEAGDAPANNIEFMLYHS DNVEASGFVQHLKLPHYVDFQANLELLRRLRAEQQGAATDAPAEDQPQEESLA
Specific function: Belongs to an operon involved in utilization of glyphosate and other phosphonates [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=355, Percent_Identity=57.1830985915493, Blast_Score=399, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 41038; Mature: 41038
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGERAILNSYQMLDAYRRGDTSVPEITLEQIREQMPLAVSRVMAEGSLYDPHLA CEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHH ALALKQAAGDQIEAIFLLRAYRTTLARFGYTQALDTGKMCLQRRISSTFKDVPGGQVLGP HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECC TYDYTQRLLDFTLEAGRDPAPLPPSPEPLAPNMPRVTSLLEAESLVEADAIPPGDPAPPD CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC LTREPLTFPAERPARLQNLARADEGFLLSMGYSTQRGYGNSHPFAGEIRYGSTEVEMFIE CCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHH ELGFAITIGEVEVTECQMVSQFAGNADEAPRLTRGYGLVFGYNERKAMSMALADRAMRAE HCCCEEEECCEEHHHHHHHHHHCCCCCCCCCHHCCEEEEEECCHHHHHHHHHHHHHHHHH ELGEAGDAPANNIEFMLYHSDNVEASGFVQHLKLPHYVDFQANLELLRRLRAEQQGAATD HHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCCCC APAEDQPQEESLA CCCCCCCCHHCCC >Mature Secondary Structure MYVAVKGGERAILNSYQMLDAYRRGDTSVPEITLEQIREQMPLAVSRVMAEGSLYDPHLA CEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCHHHH ALALKQAAGDQIEAIFLLRAYRTTLARFGYTQALDTGKMCLQRRISSTFKDVPGGQVLGP HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECC TYDYTQRLLDFTLEAGRDPAPLPPSPEPLAPNMPRVTSLLEAESLVEADAIPPGDPAPPD CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC LTREPLTFPAERPARLQNLARADEGFLLSMGYSTQRGYGNSHPFAGEIRYGSTEVEMFIE CCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHH ELGFAITIGEVEVTECQMVSQFAGNADEAPRLTRGYGLVFGYNERKAMSMALADRAMRAE HCCCEEEECCEEHHHHHHHHHHCCCCCCCCCHHCCEEEEEECCHHHHHHHHHHHHHHHHH ELGEAGDAPANNIEFMLYHSDNVEASGFVQHLKLPHYVDFQANLELLRRLRAEQQGAATD HHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCCCC APAEDQPQEESLA CCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481431 [H]