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The map label for this gene is rfaB [C]

Identifier: 94309700

GI number: 94309700

Start: 833150

End: 834412

Strand: Direct

Name: rfaB [C]

Synonym: Rmet_0755

Alternate gene names: 94309700

Gene position: 833150-834412 (Clockwise)

Preceding gene: 94309699

Following gene: 94309702

Centisome position: 21.21

GC content: 65.95

Gene sequence:

>1263_bases
ATGGCTGACCCGACGAAGGCGCTGGCCGCGCAGGGCGAGCGCAAGCCGCGCGTCCTGTTTCACGTCACGCACTTCCTGCA
CGGCGGGATCGAAACGTCGCTGGTGTCGCTGATCACCGCGCTGGATCGGGAAGGGTTCGAGATCGGCCTGACGGTGACGT
ATCCGTCCGAGGCGCTCGAGACCCATTTCCGCGCGCGGCTGCCGGCCGGCGTGAAGCTTCAGGTGCTGGCGCCCGAACGC
TGGCTCTCGCATTGCCGCCAGCTCAAGAAGGCGCGCAAGCTCGGGCCGCTTGGCAAGATCTACGAGGAAGTGCTGCTGCC
GCCCGTACGCAAGCCGCTGATGAATCGCCGCTTCCGGCAGGTGCTGGCGCAGGGCTACGACGTGGTGGTCGACTACGACA
TGTCGCTGTCGCGCATCACCGGTCCGCTGCCGGTCCCGATGATGGGATACCAGCACTTCAGCGTGGCGCACCTCGAGCGG
GGTCATCGGCGCAAGCTGCGCAAGCTTCGGCACCAGTGCCGAACCGACTACGCAGCCGTGGTGATGCTGACCGACAGCAT
GTTGAACGATGCGCGGGCGCTGATTCCCGATGTGGCGGACAAGCTCGTGCGGCTCTACAACACCATTGACCTCGACAGCA
TCCGTGCAAGGGCGAACGCGCCGCTCGATCCTTCCGCGCAGCCGGCGGGACCGTACATCGTGTCCGTCGGTCGGCTCGAG
GAAAGTCAAAAGGATTTCACGACGCTGCTGCACGCTTATGCGCAGCTTGCGAAGGAAGGTATCGACGAGGATCTGGTGCT
GGTCGGCGATGGTGCATCGCGGCAGCAACTCGAGGCGCTGGCCGCATCGCTCGGTATCGCCGATCGCGTGACCTTTGCTG
GCTTCCAGTCGAACCCCCATGCCTGGATTCGCAAGTCGCGGCTCCTGGCGTTCAGTTCGAAGATGGAAGGTTTGCCCAAT
GTGCTGCTCGAAGGGCTGGCGGTAGGGCAAGTGGTGGTCAGCACCGATTGTCCGACGGGGCCGCGCGAGATCCTCGACGA
TGGCCGCGCCGGGCTGTTGGTGCCGGTGGGCGATGCCGCGCAGCTTGCGGCGGCGATCAGGCGTGGCCTGCAGGACGCCG
CGCTGCGCGAGTCACTGCTGGCCCACGCAGCGACCCATATCGAGCAGATGGGCTTCAGGCCGACGGCCCAGGCGTTCAGT
GTGCTTGCGGATCGCCTGATGCGGCGGGCTGGCGTGCCGACTGTTGCAGCAGCCACAGCTTGA

Upstream 100 bases:

>100_bases
CAGTGCGAGGCGATGCTGGGTGACCAATGGCAGATCACGCCTTCGGAGGAAGCGTTGACGAGCCTGCGTACCGCCCTGGG
CGATACCGTGCGCGTGTTGT

Downstream 100 bases:

>100_bases
TGTACTTGTAGTAGCTGGCCTGACCGTTCATCAGCGCGATGGCCAAGCCCTGCGGGCCGTCCAGAAATCCGCGGCGCAGC
AGGTAGGTGCGCAGGAATGC

Product: putative glycosyl transferase (LPS biosynthesis-related)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MADPTKALAAQGERKPRVLFHVTHFLHGGIETSLVSLITALDREGFEIGLTVTYPSEALETHFRARLPAGVKLQVLAPER
WLSHCRQLKKARKLGPLGKIYEEVLLPPVRKPLMNRRFRQVLAQGYDVVVDYDMSLSRITGPLPVPMMGYQHFSVAHLER
GHRRKLRKLRHQCRTDYAAVVMLTDSMLNDARALIPDVADKLVRLYNTIDLDSIRARANAPLDPSAQPAGPYIVSVGRLE
ESQKDFTTLLHAYAQLAKEGIDEDLVLVGDGASRQQLEALAASLGIADRVTFAGFQSNPHAWIRKSRLLAFSSKMEGLPN
VLLEGLAVGQVVVSTDCPTGPREILDDGRAGLLVPVGDAAQLAAAIRRGLQDAALRESLLAHAATHIEQMGFRPTAQAFS
VLADRLMRRAGVPTVAAATA

Sequences:

>Translated_420_residues
MADPTKALAAQGERKPRVLFHVTHFLHGGIETSLVSLITALDREGFEIGLTVTYPSEALETHFRARLPAGVKLQVLAPER
WLSHCRQLKKARKLGPLGKIYEEVLLPPVRKPLMNRRFRQVLAQGYDVVVDYDMSLSRITGPLPVPMMGYQHFSVAHLER
GHRRKLRKLRHQCRTDYAAVVMLTDSMLNDARALIPDVADKLVRLYNTIDLDSIRARANAPLDPSAQPAGPYIVSVGRLE
ESQKDFTTLLHAYAQLAKEGIDEDLVLVGDGASRQQLEALAASLGIADRVTFAGFQSNPHAWIRKSRLLAFSSKMEGLPN
VLLEGLAVGQVVVSTDCPTGPREILDDGRAGLLVPVGDAAQLAAAIRRGLQDAALRESLLAHAATHIEQMGFRPTAQAFS
VLADRLMRRAGVPTVAAATA
>Mature_419_residues
ADPTKALAAQGERKPRVLFHVTHFLHGGIETSLVSLITALDREGFEIGLTVTYPSEALETHFRARLPAGVKLQVLAPERW
LSHCRQLKKARKLGPLGKIYEEVLLPPVRKPLMNRRFRQVLAQGYDVVVDYDMSLSRITGPLPVPMMGYQHFSVAHLERG
HRRKLRKLRHQCRTDYAAVVMLTDSMLNDARALIPDVADKLVRLYNTIDLDSIRARANAPLDPSAQPAGPYIVSVGRLEE
SQKDFTTLLHAYAQLAKEGIDEDLVLVGDGASRQQLEALAASLGIADRVTFAGFQSNPHAWIRKSRLLAFSSKMEGLPNV
LLEGLAVGQVVVSTDCPTGPREILDDGRAGLLVPVGDAAQLAAAIRRGLQDAALRESLLAHAATHIEQMGFRPTAQAFSV
LADRLMRRAGVPTVAAATA

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 45976; Mature: 45845

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPTKALAAQGERKPRVLFHVTHFLHGGIETSLVSLITALDREGFEIGLTVTYPSEALE
CCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHH
THFRARLPAGVKLQVLAPERWLSHCRQLKKARKLGPLGKIYEEVLLPPVRKPLMNRRFRQ
HHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
VLAQGYDVVVDYDMSLSRITGPLPVPMMGYQHFSVAHLERGHRRKLRKLRHQCRTDYAAV
HHHCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEE
VMLTDSMLNDARALIPDVADKLVRLYNTIDLDSIRARANAPLDPSAQPAGPYIVSVGRLE
EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEECHHH
ESQKDFTTLLHAYAQLAKEGIDEDLVLVGDGASRQQLEALAASLGIADRVTFAGFQSNPH
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCHHHHHEECCCCCCCH
AWIRKSRLLAFSSKMEGLPNVLLEGLAVGQVVVSTDCPTGPREILDDGRAGLLVPVGDAA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEECCCCCCCHHHHCCCCCEEEEECCCHH
QLAAAIRRGLQDAALRESLLAHAATHIEQMGFRPTAQAFSVLADRLMRRAGVPTVAAATA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure 
ADPTKALAAQGERKPRVLFHVTHFLHGGIETSLVSLITALDREGFEIGLTVTYPSEALE
CCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHH
THFRARLPAGVKLQVLAPERWLSHCRQLKKARKLGPLGKIYEEVLLPPVRKPLMNRRFRQ
HHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHH
VLAQGYDVVVDYDMSLSRITGPLPVPMMGYQHFSVAHLERGHRRKLRKLRHQCRTDYAAV
HHHCCCCEEEECCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEE
VMLTDSMLNDARALIPDVADKLVRLYNTIDLDSIRARANAPLDPSAQPAGPYIVSVGRLE
EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEECHHH
ESQKDFTTLLHAYAQLAKEGIDEDLVLVGDGASRQQLEALAASLGIADRVTFAGFQSNPH
HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCHHHHHEECCCCCCCH
AWIRKSRLLAFSSKMEGLPNVLLEGLAVGQVVVSTDCPTGPREILDDGRAGLLVPVGDAA
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEECCCCCCCHHHHCCCCCEEEEECCCHH
QLAAAIRRGLQDAALRESLLAHAATHIEQMGFRPTAQAFSVLADRLMRRAGVPTVAAATA
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]