Click here to switch to the map view.

The map label for this gene is 94309692

Identifier: 94309692

GI number: 94309692

Start: 824219

End: 825352

Strand: Reverse

Name: 94309692

Synonym: Rmet_0747

Alternate gene names: NA

Gene position: 825352-824219 (Counterclockwise)

Preceding gene: 94309698

Following gene: 94309691

Centisome position: 21.01

GC content: 63.84

Gene sequence:

>1134_bases
ATGCGGCCAAATCGGCACACTGCGCAATACCTCGCGAAATCCCTCTGCAGGCTGGCACTGCTGGGTGCCGCCTGGTCTGC
AGCGACGGCGCAGGCCGCCCTGCCGATCGACCAGATCCGGCTGCCGCCAGGCTTCAAGATCGAAGTGCTCAGCGACGACG
TGCCCGGCGCGCGGGCCATGACGCTGTCGCCGAAGGGCACGCTGTTCGTGGGCAGCCGCGCGGAGGGCAAGGTATATGCG
CTGGAGTCGCCGCTCGGCCCGCATCCGAAGATGCGCGTCATCGCATCCGGACTCACGATGCCCGTGGGCGTCGCCTTTCA
CGATGGCGCATTGTATGCGTCATCGACGTCGCGCATCGTGCGGCTCGACAACATCGAGGGCCGCCTCGGCGATCCGCCGC
GCCCGGTCACTATCAGCGACAGATTTCCGACCGAAACCCATCACGGCTGGAAATTCATTGCGTTTGGACCTGACGGCTAT
CTCTACGTGCCTGTCGGCGCGCCATGCAATATCTGCGCGCCGGACGAGAACCGTTACGCGAACATCATGAAAATGAAGCC
TGACGGTTCCGACCTGCGCGTAGTGGCCCGGGGCGTGCGCAACACGGTTGGCTTCGACTGGCACCCCGCCACGCACGAAC
TGTGGTTCACGGACAATGGGCGCGACTGGCTAGGCGACGACCAGCCCGACGATGAACTGAACCGATTGACGCGTGAAGGC
GAGCACTTCGGCTTTCCGTATTGCCACGCCGGCACGATTGCCGACCCGGAGTTCGGGAAACAGCGCCCGTGTTCAGCGTT
CACGCCGCCTGTCGCCAAGCTGGGGCCACATGTGGCCGCGCTCGGGATGCGCTTCTACACCGGCACGCAGTTTCCACCGG
AATATCGCAAGAACAACATCTTCATCGCCGAGCACGGTAGCTGGAACCGCTCCACTGCCATCGGCTACCGGATTGCACGG
ATCGTGCTCGATGACGATGGGCGCGTGATTCGTCAGGAGATCTTTGCCGAAGGATGGCTGCGCGACGGCAAGGCGTGGGG
TCGCCCGGTCGACGTCCAGGTGGCAAGCGACGGTTCGCTGTTGGTTAGCGACGACAAAGCCAATGCGATTTATCGCATCC
GCTACGCGCCCTGA

Upstream 100 bases:

>100_bases
CACTTAGGACTTTCCCGCGCTGTTCGGCCCCATCGGTGCGCTTCTGACGCAACACGCGGCCAGCCGAACCGTGGCGAAAA
CCGCGAACTGGAGGCATGAC

Downstream 100 bases:

>100_bases
AACCGCTTCGATACCGCGCCAATGCTGGCCTGGCGCGGCATCGCAGCAGACGCTCCAAAGCTGACAAATTTGACGAAACA
ATCCGTTACACCGGTAACGG

Product: putative soluble quinoprotein glucose/sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRPNRHTAQYLAKSLCRLALLGAAWSAATAQAALPIDQIRLPPGFKIEVLSDDVPGARAMTLSPKGTLFVGSRAEGKVYA
LESPLGPHPKMRVIASGLTMPVGVAFHDGALYASSTSRIVRLDNIEGRLGDPPRPVTISDRFPTETHHGWKFIAFGPDGY
LYVPVGAPCNICAPDENRYANIMKMKPDGSDLRVVARGVRNTVGFDWHPATHELWFTDNGRDWLGDDQPDDELNRLTREG
EHFGFPYCHAGTIADPEFGKQRPCSAFTPPVAKLGPHVAALGMRFYTGTQFPPEYRKNNIFIAEHGSWNRSTAIGYRIAR
IVLDDDGRVIRQEIFAEGWLRDGKAWGRPVDVQVASDGSLLVSDDKANAIYRIRYAP

Sequences:

>Translated_377_residues
MRPNRHTAQYLAKSLCRLALLGAAWSAATAQAALPIDQIRLPPGFKIEVLSDDVPGARAMTLSPKGTLFVGSRAEGKVYA
LESPLGPHPKMRVIASGLTMPVGVAFHDGALYASSTSRIVRLDNIEGRLGDPPRPVTISDRFPTETHHGWKFIAFGPDGY
LYVPVGAPCNICAPDENRYANIMKMKPDGSDLRVVARGVRNTVGFDWHPATHELWFTDNGRDWLGDDQPDDELNRLTREG
EHFGFPYCHAGTIADPEFGKQRPCSAFTPPVAKLGPHVAALGMRFYTGTQFPPEYRKNNIFIAEHGSWNRSTAIGYRIAR
IVLDDDGRVIRQEIFAEGWLRDGKAWGRPVDVQVASDGSLLVSDDKANAIYRIRYAP
>Mature_377_residues
MRPNRHTAQYLAKSLCRLALLGAAWSAATAQAALPIDQIRLPPGFKIEVLSDDVPGARAMTLSPKGTLFVGSRAEGKVYA
LESPLGPHPKMRVIASGLTMPVGVAFHDGALYASSTSRIVRLDNIEGRLGDPPRPVTISDRFPTETHHGWKFIAFGPDGY
LYVPVGAPCNICAPDENRYANIMKMKPDGSDLRVVARGVRNTVGFDWHPATHELWFTDNGRDWLGDDQPDDELNRLTREG
EHFGFPYCHAGTIADPEFGKQRPCSAFTPPVAKLGPHVAALGMRFYTGTQFPPEYRKNNIFIAEHGSWNRSTAIGYRIAR
IVLDDDGRVIRQEIFAEGWLRDGKAWGRPVDVQVASDGSLLVSDDKANAIYRIRYAP

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 41589; Mature: 41589

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPNRHTAQYLAKSLCRLALLGAAWSAATAQAALPIDQIRLPPGFKIEVLSDDVPGARAM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCEEEEECCCCCCCEEE
TLSPKGTLFVGSRAEGKVYALESPLGPHPKMRVIASGLTMPVGVAFHDGALYASSTSRIV
EECCCCCEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCEEEECCCCEEE
RLDNIEGRLGDPPRPVTISDRFPTETHHGWKFIAFGPDGYLYVPVGAPCNICAPDENRYA
EEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEECCCCCCEE
NIMKMKPDGSDLRVVARGVRNTVGFDWHPATHELWFTDNGRDWLGDDQPDDELNRLTREG
EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCC
EHFGFPYCHAGTIADPEFGKQRPCSAFTPPVAKLGPHVAALGMRFYTGTQFPPEYRKNNI
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHEEEEECCCCCCHHHCCCCE
FIAEHGSWNRSTAIGYRIARIVLDDDGRVIRQEIFAEGWLRDGKAWGRPVDVQVASDGSL
EEEECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCE
LVSDDKANAIYRIRYAP
EEECCCCCEEEEEEECC
>Mature Secondary Structure
MRPNRHTAQYLAKSLCRLALLGAAWSAATAQAALPIDQIRLPPGFKIEVLSDDVPGARAM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCCEEEEECCCCCCCEEE
TLSPKGTLFVGSRAEGKVYALESPLGPHPKMRVIASGLTMPVGVAFHDGALYASSTSRIV
EECCCCCEEECCCCCCEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCEEEECCCCEEE
RLDNIEGRLGDPPRPVTISDRFPTETHHGWKFIAFGPDGYLYVPVGAPCNICAPDENRYA
EEECCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEECCCCCCEE
NIMKMKPDGSDLRVVARGVRNTVGFDWHPATHELWFTDNGRDWLGDDQPDDELNRLTREG
EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCC
EHFGFPYCHAGTIADPEFGKQRPCSAFTPPVAKLGPHVAALGMRFYTGTQFPPEYRKNNI
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHEEEEECCCCCCHHHCCCCE
FIAEHGSWNRSTAIGYRIARIVLDDDGRVIRQEIFAEGWLRDGKAWGRPVDVQVASDGSL
EEEECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCE
LVSDDKANAIYRIRYAP
EEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]