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The map label for this gene is aidB [C]

Identifier: 94309684

GI number: 94309684

Start: 816675

End: 818459

Strand: Direct

Name: aidB [C]

Synonym: Rmet_0739

Alternate gene names: 94309684

Gene position: 816675-818459 (Clockwise)

Preceding gene: 94309683

Following gene: 94309686

Centisome position: 20.79

GC content: 64.54

Gene sequence:

>1785_bases
ATGACCTATCGTGCACCGCTCAAGGACATGCAGTTCGTCATGAACGAGCTGGCGGGCCTGGAAAGCATCAGCCAGTTGCC
TGGCTACGAAGACGCCACGCCCGATACGGCACAGGCCGTGCTGGAAGAGGCCGCGAAGTTCAACGAACAGGTCGTGGCAC
CGCTGAACCGCGCGGGCGATCTGAACCCGAGCAGCTGGAAGGACGGCGTGGTGACCACGACGCCGGGTTTCAGCGACGCA
TTTCGCCAGTTTGGTGAAGGCGGCTGGCAGGGCGTGCTGCATCCGTCCGATTTCGGCGGCCAGGGTCTGCCGAAGCTGGT
GGCCACGCCGTGCAACGAGATGCTGAATGCGGCGAACCTGTCGTTCGCGCTCTGCCCGTTGCTGACCGACGGCGCGATCG
AGGCGCTGCTGACCGCCGGATCGGATGCCCAGAAGGAAACCTTCCTGCCGAAGCTGATCTCGGGAGAGTGGACCGGCACG
ATGAACCTGACTGAGCCGCAGGCCGGTTCGGATCTGGCCGCCGTGCGGACCCGCGCGGAGCCGCAGGGCGATGGCACGTT
CAAGGTCTTCGGCACCAAGATCTTCATCACGTATGGCGAGCACGACATGGCGGAGAACATCGTCCATCTCGTGCTGGCAC
GCACCCCGAACGCGCCCGAAGGCGTCAAGGGCATTTCGCTGTTCATCGTGCCGAAGTTCCTGCTCAATGCGGACGGTTCG
CTGGGCGAGCGCAACGATGTGCATTGCGTGTCGATCGAACACAAGCTCGGTATCAAGGCCAGCCCCACCGCCGTGCTGCA
GTTCGGCGATCACGGTGGCGCCATTGGCACGCTGGTTGGCGAGGAGAACCGCGGGCTTGAGTACATGTTCATCATGATGA
ACTCGGCACGCTTCTCGGTGGGCATGCAAGGCATCGCCGTGTCCGAGCGTGCTTACCAGCAGGCCGTGGCGTTCGCGAAG
GAGCGCGTGCAAAGCCGTCCGGTCGATGGCTCGGCCCGCGAGGCCGTGACGATCATCCATCATCCGGACGTCAAGCGGAT
GCTGATGACGATGCGCGCGCTGATCGAAGGCGCACGCTCGGTGGCCTATGTGGCCGCCGCCGCGAGCGACATCGCGCACC
AGCATCCGGATGAGGGCGTGCGTCGTCAGAACATGGCGCTGTACGAGTTCCTGGTGCCGGTGGTGAAGGGGTGGAGCACC
GAGCTGTCGATCGACGTGACCAGCCTGGGCGTGCAAGTTCACGGTGGCATGGGATTCATCGAGGAAACCGGCGCGGCACA
ACATTATCGCGACGCGCGCATCCTGCCGATCTATGAAGGCACGACCGCGATCCAGGCGAACGATCTGATTGGCCGCAAGA
CCGTGCGCGATGGCGGTGCCATGGCACGCGCGATCTGTGCACAGATCGCCGAGACCGAAGCGGCGCTGGGCAAACACGGC
GGTGACGCGTTCACGGCGGTGCAGGCGCAACTGAAGCAGGGCCGTGAAGCGCTGGAGGCCGTGGTGGAGTTCGTCATCGG
CAGCGCGAAGGCGGACCCGAATGCCGTGTTCGCCGGTAGCGTGCCGTACCTGAAGCTGTGCGGCATCGTGTTCTCGGGCT
GGCAGTTCGGCCGTGCCATGCTGGTTGCCGATGCGAAGCGCGCGGAAGATCCAGCCTTCTACGACGCAAAGATCGCGACG
GCGCATTTCTTCGGCCAGCACATCCTGTCCCAGGCATCCGCATTCCGTGCCGCGATTGTGGGTGGTGGCGCTCCGGCCAA
CGCGCTGACGGCGGATCAGTTCTGA

Upstream 100 bases:

>100_bases
GCCTGATCGGCCGGCGGAAAGCCGGTCGATCGAACAAGAAGAATGAAGCCGTTCCGGGTATCGCCCGCGAGCGGCTTTTT
TGCAAACGCTGGAGACATTA

Downstream 100 bases:

>100_bases
TCCGGCGTACCGGGCATCAAGGCAATGAAAAGGGCGACCCCTCGGGGTCGCCCTTTTTTTCGTCACGGTGCCGAAGGATC
AGGCCGGTAGCGGCCGTGGC

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 594; Mature: 593

Protein sequence:

>594_residues
MTYRAPLKDMQFVMNELAGLESISQLPGYEDATPDTAQAVLEEAAKFNEQVVAPLNRAGDLNPSSWKDGVVTTTPGFSDA
FRQFGEGGWQGVLHPSDFGGQGLPKLVATPCNEMLNAANLSFALCPLLTDGAIEALLTAGSDAQKETFLPKLISGEWTGT
MNLTEPQAGSDLAAVRTRAEPQGDGTFKVFGTKIFITYGEHDMAENIVHLVLARTPNAPEGVKGISLFIVPKFLLNADGS
LGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNSARFSVGMQGIAVSERAYQQAVAFAK
ERVQSRPVDGSAREAVTIIHHPDVKRMLMTMRALIEGARSVAYVAAAASDIAHQHPDEGVRRQNMALYEFLVPVVKGWST
ELSIDVTSLGVQVHGGMGFIEETGAAQHYRDARILPIYEGTTAIQANDLIGRKTVRDGGAMARAICAQIAETEAALGKHG
GDAFTAVQAQLKQGREALEAVVEFVIGSAKADPNAVFAGSVPYLKLCGIVFSGWQFGRAMLVADAKRAEDPAFYDAKIAT
AHFFGQHILSQASAFRAAIVGGGAPANALTADQF

Sequences:

>Translated_594_residues
MTYRAPLKDMQFVMNELAGLESISQLPGYEDATPDTAQAVLEEAAKFNEQVVAPLNRAGDLNPSSWKDGVVTTTPGFSDA
FRQFGEGGWQGVLHPSDFGGQGLPKLVATPCNEMLNAANLSFALCPLLTDGAIEALLTAGSDAQKETFLPKLISGEWTGT
MNLTEPQAGSDLAAVRTRAEPQGDGTFKVFGTKIFITYGEHDMAENIVHLVLARTPNAPEGVKGISLFIVPKFLLNADGS
LGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNSARFSVGMQGIAVSERAYQQAVAFAK
ERVQSRPVDGSAREAVTIIHHPDVKRMLMTMRALIEGARSVAYVAAAASDIAHQHPDEGVRRQNMALYEFLVPVVKGWST
ELSIDVTSLGVQVHGGMGFIEETGAAQHYRDARILPIYEGTTAIQANDLIGRKTVRDGGAMARAICAQIAETEAALGKHG
GDAFTAVQAQLKQGREALEAVVEFVIGSAKADPNAVFAGSVPYLKLCGIVFSGWQFGRAMLVADAKRAEDPAFYDAKIAT
AHFFGQHILSQASAFRAAIVGGGAPANALTADQF
>Mature_593_residues
TYRAPLKDMQFVMNELAGLESISQLPGYEDATPDTAQAVLEEAAKFNEQVVAPLNRAGDLNPSSWKDGVVTTTPGFSDAF
RQFGEGGWQGVLHPSDFGGQGLPKLVATPCNEMLNAANLSFALCPLLTDGAIEALLTAGSDAQKETFLPKLISGEWTGTM
NLTEPQAGSDLAAVRTRAEPQGDGTFKVFGTKIFITYGEHDMAENIVHLVLARTPNAPEGVKGISLFIVPKFLLNADGSL
GERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNSARFSVGMQGIAVSERAYQQAVAFAKE
RVQSRPVDGSAREAVTIIHHPDVKRMLMTMRALIEGARSVAYVAAAASDIAHQHPDEGVRRQNMALYEFLVPVVKGWSTE
LSIDVTSLGVQVHGGMGFIEETGAAQHYRDARILPIYEGTTAIQANDLIGRKTVRDGGAMARAICAQIAETEAALGKHGG
DAFTAVQAQLKQGREALEAVVEFVIGSAKADPNAVFAGSVPYLKLCGIVFSGWQFGRAMLVADAKRAEDPAFYDAKIATA
HFFGQHILSQASAFRAAIVGGGAPANALTADQF

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=319, Percent_Identity=29.7805642633229, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI4557233, Length=425, Percent_Identity=27.7647058823529, Blast_Score=113, Evalue=6e-25,
Organism=Homo sapiens, GI4501859, Length=418, Percent_Identity=25.3588516746411, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI4557235, Length=421, Percent_Identity=28.7410926365796, Blast_Score=109, Evalue=7e-24,
Organism=Homo sapiens, GI76496475, Length=421, Percent_Identity=28.5035629453682, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI226958412, Length=412, Percent_Identity=26.2135922330097, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI226958414, Length=376, Percent_Identity=26.8617021276596, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI21361497, Length=369, Percent_Identity=25.4742547425474, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI7656849, Length=390, Percent_Identity=26.4102564102564, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI187960098, Length=361, Percent_Identity=25.7617728531856, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI4557231, Length=361, Percent_Identity=25.7617728531856, Blast_Score=82, Evalue=2e-15,
Organism=Escherichia coli, GI87082384, Length=362, Percent_Identity=27.0718232044199, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI87081958, Length=374, Percent_Identity=24.8663101604278, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17508101, Length=406, Percent_Identity=28.3251231527094, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17506239, Length=405, Percent_Identity=28.1481481481481, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71985184, Length=384, Percent_Identity=28.3854166666667, Blast_Score=119, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17505929, Length=367, Percent_Identity=28.6103542234332, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17533517, Length=370, Percent_Identity=26.4864864864865, Blast_Score=104, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=340, Percent_Identity=27.3529411764706, Blast_Score=103, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI86563381, Length=340, Percent_Identity=27.3529411764706, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17551932, Length=367, Percent_Identity=27.5204359673025, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=374, Percent_Identity=26.4705882352941, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=418, Percent_Identity=25.5980861244019, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17534899, Length=430, Percent_Identity=24.8837209302326, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=371, Percent_Identity=25.0673854447439, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=302, Percent_Identity=27.4834437086093, Blast_Score=89, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=258, Percent_Identity=30.2325581395349, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI32563615, Length=242, Percent_Identity=28.9256198347107, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71982178, Length=299, Percent_Identity=24.4147157190635, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=29.7872340425532, Blast_Score=123, Evalue=4e-28,
Organism=Drosophila melanogaster, GI281363737, Length=422, Percent_Identity=27.4881516587678, Blast_Score=112, Evalue=9e-25,
Organism=Drosophila melanogaster, GI21355753, Length=420, Percent_Identity=27.1428571428571, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24666513, Length=434, Percent_Identity=26.036866359447, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24660351, Length=361, Percent_Identity=27.4238227146814, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24646207, Length=371, Percent_Identity=24.5283018867925, Blast_Score=87, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 63293; Mature: 63161

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYRAPLKDMQFVMNELAGLESISQLPGYEDATPDTAQAVLEEAAKFNEQVVAPLNRAGD
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCC
LNPSSWKDGVVTTTPGFSDAFRQFGEGGWQGVLHPSDFGGQGLPKLVATPCNEMLNAANL
CCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCC
SFALCPLLTDGAIEALLTAGSDAQKETFLPKLISGEWTGTMNLTEPQAGSDLAAVRTRAE
CEEEHHHHHHHHHHHHHHCCCCCHHHHHCHHHHCCCCCCEEECCCCCCCCCHHHHHHCCC
PQGDGTFKVFGTKIFITYGEHDMAENIVHLVLARTPNAPEGVKGISLFIVPKFLLNADGS
CCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCC
LGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNSARFSV
CCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCC
GMQGIAVSERAYQQAVAFAKERVQSRPVDGSAREAVTIIHHPDVKRMLMTMRALIEGARS
CCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
VAYVAAAASDIAHQHPDEGVRRQNMALYEFLVPVVKGWSTELSIDVTSLGVQVHGGMGFI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCH
EETGAAQHYRDARILPIYEGTTAIQANDLIGRKTVRDGGAMARAICAQIAETEAALGKHG
HHCCCHHHHCCCEEEEEECCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCC
GDAFTAVQAQLKQGREALEAVVEFVIGSAKADPNAVFAGSVPYLKLCGIVFSGWQFGRAM
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCHHHCCEE
LVADAKRAEDPAFYDAKIATAHFFGQHILSQASAFRAAIVGGGAPANALTADQF
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TYRAPLKDMQFVMNELAGLESISQLPGYEDATPDTAQAVLEEAAKFNEQVVAPLNRAGD
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCC
LNPSSWKDGVVTTTPGFSDAFRQFGEGGWQGVLHPSDFGGQGLPKLVATPCNEMLNAANL
CCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHCCC
SFALCPLLTDGAIEALLTAGSDAQKETFLPKLISGEWTGTMNLTEPQAGSDLAAVRTRAE
CEEEHHHHHHHHHHHHHHCCCCCHHHHHCHHHHCCCCCCEEECCCCCCCCCHHHHHHCCC
PQGDGTFKVFGTKIFITYGEHDMAENIVHLVLARTPNAPEGVKGISLFIVPKFLLNADGS
CCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCC
LGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGAIGTLVGEENRGLEYMFIMMNSARFSV
CCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCC
GMQGIAVSERAYQQAVAFAKERVQSRPVDGSAREAVTIIHHPDVKRMLMTMRALIEGARS
CCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
VAYVAAAASDIAHQHPDEGVRRQNMALYEFLVPVVKGWSTELSIDVTSLGVQVHGGMGFI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCH
EETGAAQHYRDARILPIYEGTTAIQANDLIGRKTVRDGGAMARAICAQIAETEAALGKHG
HHCCCHHHHCCCEEEEEECCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCC
GDAFTAVQAQLKQGREALEAVVEFVIGSAKADPNAVFAGSVPYLKLCGIVFSGWQFGRAM
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHCCHHHCCEE
LVADAKRAEDPAFYDAKIATAHFFGQHILSQASAFRAAIVGGGAPANALTADQF
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]