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The map label for this gene is aapM [H]

Identifier: 94309637

GI number: 94309637

Start: 764038

End: 764730

Strand: Direct

Name: aapM [H]

Synonym: Rmet_0692

Alternate gene names: 94309637

Gene position: 764038-764730 (Clockwise)

Preceding gene: 94309636

Following gene: 94309638

Centisome position: 19.45

GC content: 64.94

Gene sequence:

>693_bases
ATGCTCGACGTTCTGCAGAACTACGGACTTTATTTCCTGATCGGGCAGTATCCGAATGGCCCGCTGGGCGGGCTGGCGTT
GACCGTGCTGCTGGCGGCATCCGGGCTGGTGCTGGCGTTGCCGGTCGGCATCGTGCTGGGGCTGTGCCGCGTGAGCCCGT
TCCGCACGCTGCGCTGGCCCGCCACCGTCCTGATCTACGTCGTGCGCGGCACGCCGCTGCTGATGGTGGTGTTCTGGGCG
TACTTTCTGCTGCCTTCGGTGACCGGGCACCGCACGCCGCAGTTCGCGACGATGCTGGTCGCGCTGGTGGTCTTCGACGG
GGCCTATCTGGCGGAGATCGTGCGCGCCGGCATCCAGGGGCTGCCGCGCGGGCAGATGGAAAGCGCGCGCTCGCTCGGCT
TGTCGTATGCGCAGGCGATGGCGCTGGTCATCCTGCCGCAGGCACTGCGCAATATGCTGCCGTCGCTCGTGAACCAGCTT
GTGTCGACGATCAAGGAGACATCGCTCGGCTACATCATCAGCTTGCCGGAGGTCTCGTTCATCGCCGGGCAGATCAGCAC
GCAGATGCTGACCCAGGCCGCGCAGGTCTACCTGCTGTTGGCATTGAGCTATTTTGTGATGTGCTTCGGATTGACCCGTT
GCGCCTATCTGCTCGAGCGCCGGCTCGCGGCACGCAACGCTGTGAAGGTGTAA

Upstream 100 bases:

>100_bases
CCTTCGCGTTCGCCACGCTGGCGTACCTGACCATATCGATGACGATCACGCTGTTCTCGCTCTGGTATCAACACCGGTTT
CCGGTACGGAGCATGTAGCC

Downstream 100 bases:

>100_bases
CCATGATCAGCATCGAACATGTCAGCAAGTGGTACGGCGATTATCAGGCGCTGGTCGATATCAACGAATCGGTGGCGAAG
GCGGAGGTGGTCGTCGTGTG

Product: PAAT family ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MLDVLQNYGLYFLIGQYPNGPLGGLALTVLLAASGLVLALPVGIVLGLCRVSPFRTLRWPATVLIYVVRGTPLLMVVFWA
YFLLPSVTGHRTPQFATMLVALVVFDGAYLAEIVRAGIQGLPRGQMESARSLGLSYAQAMALVILPQALRNMLPSLVNQL
VSTIKETSLGYIISLPEVSFIAGQISTQMLTQAAQVYLLLALSYFVMCFGLTRCAYLLERRLAARNAVKV

Sequences:

>Translated_230_residues
MLDVLQNYGLYFLIGQYPNGPLGGLALTVLLAASGLVLALPVGIVLGLCRVSPFRTLRWPATVLIYVVRGTPLLMVVFWA
YFLLPSVTGHRTPQFATMLVALVVFDGAYLAEIVRAGIQGLPRGQMESARSLGLSYAQAMALVILPQALRNMLPSLVNQL
VSTIKETSLGYIISLPEVSFIAGQISTQMLTQAAQVYLLLALSYFVMCFGLTRCAYLLERRLAARNAVKV
>Mature_230_residues
MLDVLQNYGLYFLIGQYPNGPLGGLALTVLLAASGLVLALPVGIVLGLCRVSPFRTLRWPATVLIYVVRGTPLLMVVFWA
YFLLPSVTGHRTPQFATMLVALVVFDGAYLAEIVRAGIQGLPRGQMESARSLGLSYAQAMALVILPQALRNMLPSLVNQL
VSTIKETSLGYIISLPEVSFIAGQISTQMLTQAAQVYLLLALSYFVMCFGLTRCAYLLERRLAARNAVKV

Specific function: Probably part of the binding-protein-dependent transport system ydhWXYZ for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87082239, Length=219, Percent_Identity=37.4429223744292, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1786873, Length=215, Percent_Identity=34.4186046511628, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI1788226, Length=201, Percent_Identity=35.3233830845771, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=34.8837209302326, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI48994930, Length=241, Percent_Identity=32.3651452282158, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786874, Length=238, Percent_Identity=24.7899159663866, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1788645, Length=197, Percent_Identity=29.4416243654822, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787087, Length=224, Percent_Identity=25.4464285714286, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787086, Length=166, Percent_Identity=28.3132530120482, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25010; Mature: 25010

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVLQNYGLYFLIGQYPNGPLGGLALTVLLAASGLVLALPVGIVLGLCRVSPFRTLRWP
CCCCHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHH
ATVLIYVVRGTPLLMVVFWAYFLLPSVTGHRTPQFATMLVALVVFDGAYLAEIVRAGIQG
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
LPRGQMESARSLGLSYAQAMALVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH
IAGQISTQMLTQAAQVYLLLALSYFVMCFGLTRCAYLLERRLAARNAVKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDVLQNYGLYFLIGQYPNGPLGGLALTVLLAASGLVLALPVGIVLGLCRVSPFRTLRWP
CCCCHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHH
ATVLIYVVRGTPLLMVVFWAYFLLPSVTGHRTPQFATMLVALVVFDGAYLAEIVRAGIQG
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
LPRGQMESARSLGLSYAQAMALVILPQALRNMLPSLVNQLVSTIKETSLGYIISLPEVSF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHH
IAGQISTQMLTQAAQVYLLLALSYFVMCFGLTRCAYLLERRLAARNAVKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]