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The map label for this gene is 94309607

Identifier: 94309607

GI number: 94309607

Start: 730033

End: 730821

Strand: Direct

Name: 94309607

Synonym: Rmet_0662

Alternate gene names: NA

Gene position: 730033-730821 (Clockwise)

Preceding gene: 94309606

Following gene: 94309611

Centisome position: 18.58

GC content: 64.39

Gene sequence:

>789_bases
ATGTTTAGCGGATTTGCAGCCGTCCCCGGCGCAGTCGTGCCGTATTCGTACAACTGGCTCATGGTGGGCCTGTCCTTCCT
GATCTCCGCGTGTGGGGCCTACGTGGCGCTGCGATGGTGCCGGGGTATCCGAAAACCGAACGGCCGCCTGGATGTGGATC
GCCTGATGTGCGCGAGCGTCGCGCTCGGCGGTGGCGCGGTCTGGGCGATGCACTTCATCGGCATGGTCGCGTATCAGACG
CCGACCCATATGGAATTCAGCCTGCTGGTCACGCTGGCTTCGCTTTTGGCCGTGATGGTGTTTGCCGCCGCCGGTCTGGC
GAAGGCATCGAGTCCCACGGGTAATCCCCTGAGCAATACGATCAAGGGCGGCGTGCTGACGGGCACTGGCGTGGTAGTGA
TGCACTACACCGGCATGGCCGCGATTCACACCAACAGCGTGTTCGAGTGGGATCTGTTCATCGTGGCGCTGTCCGCGTTG
ATCGCCATTGTCGTGTCCGCGGTCGGCCTGTGGCTGGCCACCAACGTGAAGACCGTGGCGCAGCAGATCGGCGCCGCGCT
GGTGATGGCCGTGGCGGTCTGCGGGATGCACTACACGGGCATGACGGCGGGCACCATGATCTGCACCGGCCGCACCTACT
CGCCGACGCTGCTCGCGCTGGAAGGCGACAACATGGGTTATGCGGTCTTCGCGCTGACAGCCGTGGTGCTGATCTTCATT
CTGGTGATCGAGGCGACGCGCAGCGGGTCGCAATCGGTTTCGGTGGCGTCGGCCAGCGGCCGCCATTGA

Upstream 100 bases:

>100_bases
CACCTGCTGTCGACGCATTGCATTCCCAAGATGTATTTGCCGTAACAACGACGCCTTCGCCCGAAGGCGGAAAACAGTCG
GTGTCCTACGAGGGGTCTAC

Downstream 100 bases:

>100_bases
TGCGCAACGCGGGCGGGGCATGGCTCCGCTCGGTTGCGCGACTGGTCAGAGCACGATCGGTCGATCGTCGAGTTCGTTGG
GGTTGTTGCCGCCACTGGCC

Product: putative integral membrane prtein with MHYT domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MFSGFAAVPGAVVPYSYNWLMVGLSFLISACGAYVALRWCRGIRKPNGRLDVDRLMCASVALGGGAVWAMHFIGMVAYQT
PTHMEFSLLVTLASLLAVMVFAAAGLAKASSPTGNPLSNTIKGGVLTGTGVVVMHYTGMAAIHTNSVFEWDLFIVALSAL
IAIVVSAVGLWLATNVKTVAQQIGAALVMAVAVCGMHYTGMTAGTMICTGRTYSPTLLALEGDNMGYAVFALTAVVLIFI
LVIEATRSGSQSVSVASASGRH

Sequences:

>Translated_262_residues
MFSGFAAVPGAVVPYSYNWLMVGLSFLISACGAYVALRWCRGIRKPNGRLDVDRLMCASVALGGGAVWAMHFIGMVAYQT
PTHMEFSLLVTLASLLAVMVFAAAGLAKASSPTGNPLSNTIKGGVLTGTGVVVMHYTGMAAIHTNSVFEWDLFIVALSAL
IAIVVSAVGLWLATNVKTVAQQIGAALVMAVAVCGMHYTGMTAGTMICTGRTYSPTLLALEGDNMGYAVFALTAVVLIFI
LVIEATRSGSQSVSVASASGRH
>Mature_262_residues
MFSGFAAVPGAVVPYSYNWLMVGLSFLISACGAYVALRWCRGIRKPNGRLDVDRLMCASVALGGGAVWAMHFIGMVAYQT
PTHMEFSLLVTLASLLAVMVFAAAGLAKASSPTGNPLSNTIKGGVLTGTGVVVMHYTGMAAIHTNSVFEWDLFIVALSAL
IAIVVSAVGLWLATNVKTVAQQIGAALVMAVAVCGMHYTGMTAGTMICTGRTYSPTLLALEGDNMGYAVFALTAVVLIFI
LVIEATRSGSQSVSVASASGRH

Specific function: Unknown

COG id: COG3300

COG function: function code T; MHYT domain (predicted integral membrane sensor domain)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MHYT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR005330 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]

EC number: NA

Molecular weight: Translated: 27234; Mature: 27234

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS50924 MHYT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSGFAAVPGAVVPYSYNWLMVGLSFLISACGAYVALRWCRGIRKPNGRLDVDRLMCASV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ALGGGAVWAMHFIGMVAYQTPTHMEFSLLVTLASLLAVMVFAAAGLAKASSPTGNPLSNT
HCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
IKGGVLTGTGVVVMHYTGMAAIHTNSVFEWDLFIVALSALIAIVVSAVGLWLATNVKTVA
HCCCEEECCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQIGAALVMAVAVCGMHYTGMTAGTMICTGRTYSPTLLALEGDNMGYAVFALTAVVLIFI
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
LVIEATRSGSQSVSVASASGRH
HHHHHCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MFSGFAAVPGAVVPYSYNWLMVGLSFLISACGAYVALRWCRGIRKPNGRLDVDRLMCASV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ALGGGAVWAMHFIGMVAYQTPTHMEFSLLVTLASLLAVMVFAAAGLAKASSPTGNPLSNT
HCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
IKGGVLTGTGVVVMHYTGMAAIHTNSVFEWDLFIVALSALIAIVVSAVGLWLATNVKTVA
HCCCEEECCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQIGAALVMAVAVCGMHYTGMTAGTMICTGRTYSPTLLALEGDNMGYAVFALTAVVLIFI
HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHH
LVIEATRSGSQSVSVASASGRH
HHHHHCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]